RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 SPRYD3Q8NCJ5 442 aa16.95■□□□□ 0.3
CXCL1-202ENST00000509101 SMYD3Q9H7B4 428 aa16.95■□□□□ 0.3
CXCL1-202ENST00000509101 CD248Q9HCU0 757 aa16.95■□□□□ 0.3
CXCL1-202ENST00000509101 STARD13Q9Y3M8 1113 aa16.95■□□□□ 0.3
CXCL1-202ENST00000509101 PCDHB9Q9Y5E1 797 aa16.95■□□□□ 0.3
CXCL1-202ENST00000509101 RAD54BQ9Y620 910 aa16.95■□□□□ 0.3
CXCL1-202ENST00000509101 CELSR3Q9NYQ7 3312 aa16.94■□□□□ 0.3
CXCL1-202ENST00000509101 NDUFS2O75306 463 aa16.94■□□□□ 0.3
CXCL1-202ENST00000509101 GJB3O75712 270 aa16.94■□□□□ 0.3
CXCL1-202ENST00000509101 CAPNS1P04632 268 aa16.94■□□□□ 0.3
CXCL1-202ENST00000509101 TUBP50607 506 aa16.94■□□□□ 0.3
CXCL1-202ENST00000509101 CYP2J2P51589 502 aa16.94■□□□□ 0.3
CXCL1-202ENST00000509101 MYL6P60660 151 aa16.94■□□□□ 0.3
CXCL1-202ENST00000509101 CYP24A1Q07973 514 aa16.94■□□□□ 0.3
CXCL1-202ENST00000509101 TRPC3Q13507 836 aa16.94■□□□□ 0.3
CXCL1-202ENST00000509101 PSMD6Q15008 389 aa16.94■□□□□ 0.3
CXCL1-202ENST00000509101 TRIP6Q15654 476 aaKnown RBP16.94■□□□□ 0.3
CXCL1-202ENST00000509101 SNX30Q5VWJ9 437 aa16.94■□□□□ 0.3
CXCL1-202ENST00000509101 SDE2Q6IQ49 451 aa16.94■□□□□ 0.3
CXCL1-202ENST00000509101 KIAA1324Q6UXG2 1013 aaKnown RBP16.94■□□□□ 0.3
CXCL1-202ENST00000509101 SCARA5Q6ZMJ2 495 aa16.94■□□□□ 0.3
CXCL1-202ENST00000509101 PNPLA1Q8N8W4 532 aa16.94■□□□□ 0.3
CXCL1-202ENST00000509101 SCFD1Q8WVM8 642 aa16.94■□□□□ 0.3
CXCL1-202ENST00000509101 DUSP9Q99956 384 aaKnown RBP16.94■□□□□ 0.3
CXCL1-202ENST00000509101 TRIM9Q9C026 710 aa16.94■□□□□ 0.3
CXCL1-202ENST00000509101 DMAP1Q9NPF5 467 aaPredicted RBP16.94■□□□□ 0.3
CXCL1-202ENST00000509101 AGPAT3Q9NRZ7 376 aa16.94■□□□□ 0.3
CXCL1-202ENST00000509101 GPSM3Q9Y4H4 160 aa16.94■□□□□ 0.3
CXCL1-202ENST00000509101 ACACAQ13085 2346 aa16.94■□□□□ 0.3
CXCL1-202ENST00000509101 CLIC2O15247 247 aa16.93■□□□□ 0.3
CXCL1-202ENST00000509101 CACNG3O60359 315 aa16.93■□□□□ 0.3
CXCL1-202ENST00000509101 TLR5O60602 858 aa16.93■□□□□ 0.3
CXCL1-202ENST00000509101 FAM163BP0C2L3 166 aa16.93■□□□□ 0.3
CXCL1-202ENST00000509101 ZDHHC11BP0C7U3 371 aa16.93■□□□□ 0.3
CXCL1-202ENST00000509101 GRIK2Q13002 908 aa16.93■□□□□ 0.3
CXCL1-202ENST00000509101 TPGS1Q6ZTW0 290 aa16.93■□□□□ 0.3
CXCL1-202ENST00000509101 TOGARAM2Q6ZUX3 1019 aa16.93■□□□□ 0.3
CXCL1-202ENST00000509101 ADAMTS14Q8WXS8 1223 aa16.93■□□□□ 0.3
CXCL1-202ENST00000509101 SMARCD1Q96GM5 515 aa16.93■□□□□ 0.3
CXCL1-202ENST00000509101 XPO6Q96QU8 1125 aaKnown RBP16.93■□□□□ 0.3
CXCL1-202ENST00000509101 GABRG3Q99928 467 aa16.93■□□□□ 0.3
CXCL1-202ENST00000509101 BBS2Q9BXC9 721 aa16.93■□□□□ 0.3
CXCL1-202ENST00000509101 XYLT2Q9H1B5 865 aa16.93■□□□□ 0.3
CXCL1-202ENST00000509101 KRT82Q9NSB4 513 aa16.93■□□□□ 0.3
CXCL1-202ENST00000509101 CACNA2D2Q9NY47 1150 aa16.93■□□□□ 0.3
CXCL1-202ENST00000509101 SUSD2Q9UGT4 822 aa16.93■□□□□ 0.3
CXCL1-202ENST00000509101 APC2O95996 2303 aa16.93■□□□□ 0.3
CXCL1-202ENST00000509101 PRRT4C9JH25 899 aa16.92■□□□□ 0.3
CXCL1-202ENST00000509101 EIF3DO15371 548 aaKnown RBP eCLIP16.92■□□□□ 0.3
CXCL1-202ENST00000509101 TGFB1I1O43294 461 aa16.92■□□□□ 0.3
CXCL1-202ENST00000509101 AP1G2O75843 785 aa16.92■□□□□ 0.3
CXCL1-202ENST00000509101 STAU1O95793 577 aaKnown RBP16.92■□□□□ 0.3
CXCL1-202ENST00000509101 TYRP14679 529 aa16.92■□□□□ 0.3
CXCL1-202ENST00000509101 MAOBP27338 520 aa16.92■□□□□ 0.3
CXCL1-202ENST00000509101 PGFP49763 221 aa16.92■□□□□ 0.3
CXCL1-202ENST00000509101 CDH8P55286 799 aa16.92■□□□□ 0.3
CXCL1-202ENST00000509101 SLC14A1Q13336 389 aa16.92■□□□□ 0.3
CXCL1-202ENST00000509101 SYCP2LQ5T4T6 812 aa16.92■□□□□ 0.3
CXCL1-202ENST00000509101 PAQR9Q6ZVX9 377 aa16.92■□□□□ 0.3
CXCL1-202ENST00000509101 NELFCDQ8IXH7 590 aa16.92■□□□□ 0.3
CXCL1-202ENST00000509101 ZNF516Q92618 1163 aa16.92■□□□□ 0.3
CXCL1-202ENST00000509101 SYAP1Q96A49 352 aaPredicted RBP16.92■□□□□ 0.3
CXCL1-202ENST00000509101 ELMO3Q96BJ8 720 aa16.92■□□□□ 0.3
CXCL1-202ENST00000509101 ZNF419Q96HQ0 510 aaPredicted RBP16.92■□□□□ 0.3
CXCL1-202ENST00000509101 MRGPRX1Q96LB2 322 aa16.92■□□□□ 0.3
CXCL1-202ENST00000509101 GZF1Q9H116 711 aaPredicted RBP16.92■□□□□ 0.3
CXCL1-202ENST00000509101 TNMDQ9H2S6 317 aa16.92■□□□□ 0.3
CXCL1-202ENST00000509101 FAM124BQ9H5Z6 455 aaPredicted RBP16.92■□□□□ 0.3
CXCL1-202ENST00000509101 IL37Q9NZH6 218 aa16.92■□□□□ 0.3
CXCL1-202ENST00000509101 TMEM131Q92545 1883 aa16.92■□□□□ 0.3
CXCL1-202ENST00000509101 FAM92AA1XBS5 289 aa16.91■□□□□ 0.3
CXCL1-202ENST00000509101 PHACTR2O75167 634 aa16.91■□□□□ 0.3
CXCL1-202ENST00000509101 TBX18O95935 607 aa16.91■□□□□ 0.3
CXCL1-202ENST00000509101 GNSP15586 552 aa16.91■□□□□ 0.3
CXCL1-202ENST00000509101 ATICP31939 592 aa16.91■□□□□ 0.3
CXCL1-202ENST00000509101 ASIC1P78348 528 aa16.91■□□□□ 0.3
CXCL1-202ENST00000509101 COL28A1Q2UY09 1125 aa16.91■□□□□ 0.3
CXCL1-202ENST00000509101 FAM26FQ5R3K3 315 aa16.91■□□□□ 0.3
CXCL1-202ENST00000509101 HTR3DQ70Z44 454 aa16.91■□□□□ 0.3
CXCL1-202ENST00000509101 EPM2AIP1Q7L775 607 aaPredicted RBP16.91■□□□□ 0.3
CXCL1-202ENST00000509101 FUKQ8N0W3 1084 aa16.91■□□□□ 0.3
CXCL1-202ENST00000509101 XXYLT1Q8NBI6 393 aa16.91■□□□□ 0.3
CXCL1-202ENST00000509101 ZMIZ2Q8NF64 920 aa16.91■□□□□ 0.3
CXCL1-202ENST00000509101 FOXJ1Q92949 421 aa16.91■□□□□ 0.3
CXCL1-202ENST00000509101 BHMTQ93088 406 aa16.91■□□□□ 0.3
CXCL1-202ENST00000509101 CCDC86Q9H6F5 360 aaKnown RBP16.91■□□□□ 0.3
CXCL1-202ENST00000509101 LSM7Q9UK45 103 aaKnown RBP16.91■□□□□ 0.3
CXCL1-202ENST00000509101 CKAP5Q14008 2032 aa16.91■□□□□ 0.3
CXCL1-202ENST00000509101 TP53BP1Q12888 1972 aaPredicted RBP16.9■□□□□ 0.3
CXCL1-202ENST00000509101 MEI4A8MW99 385 aa16.9■□□□□ 0.3
CXCL1-202ENST00000509101 WASH3PC4AMC7 463 aa16.9■□□□□ 0.3
CXCL1-202ENST00000509101 GREM1O60565 184 aa16.9■□□□□ 0.3
CXCL1-202ENST00000509101 CCDC130P13994 396 aa16.9■□□□□ 0.3
CXCL1-202ENST00000509101 DGKGP49619 791 aa16.9■□□□□ 0.3
CXCL1-202ENST00000509101 CASP4P49662 377 aa16.9■□□□□ 0.3
CXCL1-202ENST00000509101 ORC1Q13415 861 aa16.9■□□□□ 0.3
CXCL1-202ENST00000509101 BIRC3Q13489 604 aa16.9■□□□□ 0.3
CXCL1-202ENST00000509101 ZNF699Q32M78 642 aa16.9■□□□□ 0.3
CXCL1-202ENST00000509101 WDR45BQ5MNZ6 344 aa16.9■□□□□ 0.3
CXCL1-202ENST00000509101 PDZD3Q86UT5 571 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms