RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 SLC11A2P49281 568 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 ALDH5A1P51649 535 aaPredicted RBP2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 NEK3P51956 506 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 KRTAP10-5P60370 271 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 E2F1Q01094 437 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 CHAF1AQ13111 956 aaPredicted RBP2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 STK3Q13188 491 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 SEMA3AQ14563 771 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 PUM3Q15397 648 aaKnown RBP2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 RBMS2Q15434 407 aaKnown RBP2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 FAM187BQ17R55 369 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 LY6KQ17RY6 165 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 LEXMQ3ZCV2 418 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 AMOTQ4VCS5 1084 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 ZNF628Q5EBL2 1059 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 FAM83BQ5T0W9 1011 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 DEPDC1Q5TB30 811 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 DPY19L3Q6ZPD9 716 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 ABRAQ8N0Z2 381 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 CCDC89Q8N998 374 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 SPATA5Q8NB90 893 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 PPHLN1Q8NEY8 458 aaKnown RBP2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 PLBD2Q8NHP8 589 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 RSPRY1Q96DX4 576 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 HSPBAP1Q96EW2 488 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 MOGAT1Q96PD6 335 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 CTAGE1Q96RT6 745 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 PRR25Q96S07 402 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 EFHD1Q9BUP0 239 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 CHST12Q9NRB3 414 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 PCDHA6Q9UN73 950 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 SNX14Q9Y5W7 946 aa2.82□□□□□ -1.96
DEPDC1B-204ENST00000509006 BTBD19C9JJ37 291 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 H3BUI4 141 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 ZNF500O60304 480 aaPredicted RBP2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 OFD1O75665 1012 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 OAZ2O95190 189 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 KCNA3P22001 575 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 AKAP5P24588 427 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 CALRP27797 417 aaKnown RBP2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 HALP42357 657 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 DGKEP52429 567 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 UCP3P55916 312 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 WNT3P56703 355 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 PSG6Q00889 435 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 IFIT5Q13325 482 aaKnown RBP2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 ERAP2Q6P179 960 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 C9orf47Q6ZRZ4 202 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 CAND1Q86VP6 1230 aaKnown RBP2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 GAS2L3Q86XJ1 694 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 SFTPA1Q8IWL2 248 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 SLC15A3Q8IY34 581 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 IZUMO1Q8IYV9 350 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 ADAMTS18Q8TE60 1221 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 OSCP1Q8WVF1 389 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 CCT6BQ92526 530 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 MVB12AQ96EY5 273 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 LTV1Q96GA3 475 aaPredicted RBP2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 LYZL4Q96KX0 146 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 MRGPRX1Q96LB2 322 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 TBATAQ96M53 351 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 MMS19Q96T76 1030 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 AS3MTQ9HBK9 375 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 PTPRHQ9HD43 1115 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 ARFGAP3Q9NP61 516 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 PGAP2Q9UHJ9 254 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 RABGAP1Q9Y3P9 1069 aa2.81□□□□□ -1.96
DEPDC1B-204ENST00000509006 A0A087WWL8 130 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 FAM90A8PA6NJQ4 464 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 PRSS44E7EML9 344 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 F5H423 210 aaPredicted RBP2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 CCER2I3L3R5 266 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 AP4M1O00189 453 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 DSCR3O14972 297 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 CTNND1O60716 968 aaKnown RBP2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 CNOT3O75175 753 aaKnown RBP2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 ALDH2P05091 517 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 THP07101 528 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 TMEM191BP0C7N4 346 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 FAM90A13PP0C7W8 464 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 FAM90A24PP0C7X0 464 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 CYP2C9P11712 490 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 HSD3B1P14060 373 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 ARFIP2P53365 341 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 DDX10Q13206 875 aaKnown RBP2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 TBX2Q13207 712 aaPredicted RBP2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 ZNF268Q14587 947 aaPredicted RBP2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 KCTD2Q14681 263 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 KHDC1LQ5JSQ8 128 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 IFIT1BQ5T764 474 aaKnown RBP2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 SERPINA13PQ6UXR4 307 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 DEF8Q6ZN54 512 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 SRLQ86TD4 932 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 TPH2Q8IWU9 490 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 FAM9BQ8IZU0 186 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 LINC01465Q8N7H1 131 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 VPS37AQ8NEZ2 397 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 SKA1Q96BD8 255 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 MPP4Q96JB8 637 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 FYTTD1Q96QD9 318 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms