RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 SCD5Q86SK9 330 aa23.25■■□□□ 1.31
PACRGL-220ENST00000508952 TMEM25Q86YD3 366 aa23.25■■□□□ 1.31
PACRGL-220ENST00000508952 DUSP9Q99956 384 aaKnown RBP23.25■■□□□ 1.31
PACRGL-220ENST00000508952 SPHK2Q9NRA0 654 aa23.25■■□□□ 1.31
PACRGL-220ENST00000508952 DLL3Q9NYJ7 618 aa23.25■■□□□ 1.31
PACRGL-220ENST00000508952 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.25■■□□□ 1.31
PACRGL-220ENST00000508952 PPP1R3GB7ZBB8 358 aa23.24■■□□□ 1.31
PACRGL-220ENST00000508952 BIN1O00499 593 aa23.24■■□□□ 1.31
PACRGL-220ENST00000508952 LMNB2Q03252 620 aa23.24■■□□□ 1.31
PACRGL-220ENST00000508952 PUM1Q14671 1186 aaKnown RBP eCLIP23.24■■□□□ 1.31
PACRGL-220ENST00000508952 ANO4Q32M45 955 aa23.24■■□□□ 1.31
PACRGL-220ENST00000508952 ARHGAP17Q68EM7 881 aa23.24■■□□□ 1.31
PACRGL-220ENST00000508952 HTR3DQ70Z44 454 aa23.24■■□□□ 1.31
PACRGL-220ENST00000508952 CACNA2D4Q7Z3S7 1137 aa23.24■■□□□ 1.31
PACRGL-220ENST00000508952 TSTD1Q8NFU3 115 aa23.24■■□□□ 1.31
PACRGL-220ENST00000508952 ZDHHC4Q9NPG8 344 aa23.24■■□□□ 1.31
PACRGL-220ENST00000508952 SEMA4GQ9NTN9 838 aa23.24■■□□□ 1.31
PACRGL-220ENST00000508952 MMP17Q9ULZ9 603 aa23.24■■□□□ 1.31
PACRGL-220ENST00000508952 USP3Q9Y6I4 520 aa23.24■■□□□ 1.31
PACRGL-220ENST00000508952 HOXC11O43248 304 aaPredicted RBP23.23■■□□□ 1.31
PACRGL-220ENST00000508952 LRP3O75074 770 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 CHRM1P11229 460 aaPredicted RBP23.23■■□□□ 1.31
PACRGL-220ENST00000508952 TIE1P35590 1138 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 GRIA2P42262 883 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 FMO5P49326 533 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 MORC3Q14149 939 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 GOLGA7BQ2TAP0 167 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 CCDC40Q4G0X9 1142 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 EMC10Q5UCC4 262 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 BTBD8Q5XKL5 378 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 TTI2Q6NXR4 508 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 DGLUCYQ7Z3D6 616 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 PIGZQ86VD9 579 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 TTC30AQ86WT1 665 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 ETFBKMTQ8IXQ9 262 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 PHTF2Q8N3S3 785 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 ALLCQ8N6M5 410 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 NELFBQ8WX92 580 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 CEP63Q96MT8 703 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 FAM124BQ9H5Z6 455 aaPredicted RBP23.23■■□□□ 1.31
PACRGL-220ENST00000508952 METTL14Q9HCE5 456 aaKnown RBP23.23■■□□□ 1.31
PACRGL-220ENST00000508952 EBF1Q9UH73 591 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 DNMT3LQ9UJW3 386 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 CTNND2Q9UQB3 1225 aa23.23■■□□□ 1.31
PACRGL-220ENST00000508952 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.22■■□□□ 1.31
PACRGL-220ENST00000508952 DCLK1O15075 740 aa23.22■■□□□ 1.31
PACRGL-220ENST00000508952 TULP3O75386 442 aa23.22■■□□□ 1.31
PACRGL-220ENST00000508952 KLF8O95600 359 aaPredicted RBP23.22■■□□□ 1.31
PACRGL-220ENST00000508952 PPP1R2P41236 205 aa23.22■■□□□ 1.31
PACRGL-220ENST00000508952 DGKEP52429 567 aa23.22■■□□□ 1.31
PACRGL-220ENST00000508952 MRPS21P82921 87 aaKnown RBP23.22■■□□□ 1.31
PACRGL-220ENST00000508952 GOLGA8FQ08AF8 430 aa23.22■■□□□ 1.31
PACRGL-220ENST00000508952 GOLGA8DPQ0D2H9 430 aa23.22■■□□□ 1.31
PACRGL-220ENST00000508952 KLHDC10Q6PID8 442 aa23.22■■□□□ 1.31
PACRGL-220ENST00000508952 ANKRD52Q8NB46 1076 aa23.22■■□□□ 1.31
PACRGL-220ENST00000508952 TPSD1Q9BZJ3 242 aa23.22■■□□□ 1.31
PACRGL-220ENST00000508952 LSM7Q9UK45 103 aaKnown RBP23.22■■□□□ 1.31
PACRGL-220ENST00000508952 PRR5-ARHGAP8B1AHC4 643 aa23.21■■□□□ 1.31
PACRGL-220ENST00000508952 TULP2O00295 520 aa23.21■■□□□ 1.31
PACRGL-220ENST00000508952 TRIM24O15164 1050 aa23.21■■□□□ 1.31
PACRGL-220ENST00000508952 HNRNPLP14866 589 aaKnown RBP eCLIP23.21■■□□□ 1.31
PACRGL-220ENST00000508952 PSEN1P49768 467 aa23.21■■□□□ 1.31
PACRGL-220ENST00000508952 ARHGAP8P85298 464 aa23.21■■□□□ 1.31
PACRGL-220ENST00000508952 FOXK2Q01167 660 aa23.21■■□□□ 1.31
PACRGL-220ENST00000508952 CCDC6Q16204 474 aa23.21■■□□□ 1.31
PACRGL-220ENST00000508952 CSRP2Q16527 193 aa23.21■■□□□ 1.31
PACRGL-220ENST00000508952 ANO7Q6IWH7 933 aa23.21■■□□□ 1.31
PACRGL-220ENST00000508952 TMEM92Q6UXU6 159 aa23.21■■□□□ 1.31
PACRGL-220ENST00000508952 MIB1Q86YT6 1006 aa23.21■■□□□ 1.31
PACRGL-220ENST00000508952 UBR7Q8N806 425 aa23.21■■□□□ 1.31
PACRGL-220ENST00000508952 IL17RCQ8NAC3 791 aa23.21■■□□□ 1.31
PACRGL-220ENST00000508952 TXNDC5Q8NBS9 432 aaKnown RBP23.21■■□□□ 1.31
PACRGL-220ENST00000508952 ARRDC1-AS1Q9H2J1 176 aa23.21■■□□□ 1.31
PACRGL-220ENST00000508952 DEC1Q9P2X7 70 aa23.21■■□□□ 1.31
PACRGL-220ENST00000508952 TSPAN16Q9UKR8 245 aa23.21■■□□□ 1.31
PACRGL-220ENST00000508952 INVSQ9Y283 1065 aa23.21■■□□□ 1.31
PACRGL-220ENST00000508952 MYO18AQ92614 2054 aaKnown RBP23.21■■□□□ 1.31
PACRGL-220ENST00000508952 A0A0A0MRY4 1105 aa23.2■■□□□ 1.3
PACRGL-220ENST00000508952 NEDD8-MDP1E9PL57 170 aa23.2■■□□□ 1.3
PACRGL-220ENST00000508952 SGK1O00141 431 aa23.2■■□□□ 1.3
PACRGL-220ENST00000508952 RALAP11233 206 aa23.2■■□□□ 1.3
PACRGL-220ENST00000508952 CD19P15391 556 aa23.2■■□□□ 1.3
PACRGL-220ENST00000508952 KIR2DL1P43626 348 aaPredicted RBP23.2■■□□□ 1.3
PACRGL-220ENST00000508952 PLA2G4AP47712 749 aa23.2■■□□□ 1.3
PACRGL-220ENST00000508952 STX17P56962 302 aa23.2■■□□□ 1.3
PACRGL-220ENST00000508952 YWHAEP62258 255 aaKnown RBP23.2■■□□□ 1.3
PACRGL-220ENST00000508952 CRY1Q16526 586 aa23.2■■□□□ 1.3
PACRGL-220ENST00000508952 SGO2Q562F6 1265 aa23.2■■□□□ 1.3
PACRGL-220ENST00000508952 RAB41Q5JT25 222 aa23.2■■□□□ 1.3
PACRGL-220ENST00000508952 PRR23CQ6ZRP0 262 aa23.2■■□□□ 1.3
PACRGL-220ENST00000508952 TPGS1Q6ZTW0 290 aa23.2■■□□□ 1.3
PACRGL-220ENST00000508952 UBXN6Q9BZV1 441 aa23.2■■□□□ 1.3
PACRGL-220ENST00000508952 CLIC5Q9NZA1 410 aa23.2■■□□□ 1.3
PACRGL-220ENST00000508952 RASAL2Q9UJF2 1139 aa23.2■■□□□ 1.3
PACRGL-220ENST00000508952 CDV3Q9UKY7 258 aaKnown RBP23.2■■□□□ 1.3
PACRGL-220ENST00000508952 CIZ1Q9ULV3 898 aaPredicted RBP23.2■■□□□ 1.3
PACRGL-220ENST00000508952 TBC1D3BA6NDS4 549 aa23.19■■□□□ 1.3
PACRGL-220ENST00000508952 STC2O76061 302 aa23.19■■□□□ 1.3
PACRGL-220ENST00000508952 EPN2O95208 641 aa23.19■■□□□ 1.3
PACRGL-220ENST00000508952 TNFRSF4P43489 277 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms