RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 DAG1Q14118 895 aa6.31□□□□□ -1.4
TOPBP1-206ENST00000508524 MZT2AQ6P582 158 aa6.31□□□□□ -1.4
TOPBP1-206ENST00000508524 SDR16C5Q8N3Y7 309 aa6.31□□□□□ -1.4
TOPBP1-206ENST00000508524 MAFAQ8NHW3 353 aaPredicted RBP6.31□□□□□ -1.4
TOPBP1-206ENST00000508524 TTC17Q96AE7 1141 aa6.31□□□□□ -1.4
TOPBP1-206ENST00000508524 CCDC17Q96LX7 622 aa6.31□□□□□ -1.4
TOPBP1-206ENST00000508524 HIST1H2AAQ96QV6 131 aa6.31□□□□□ -1.4
TOPBP1-206ENST00000508524 NKX1-2Q9UD57 310 aaPredicted RBP6.31□□□□□ -1.4
TOPBP1-206ENST00000508524 STEAP1Q9UHE8 339 aa6.31□□□□□ -1.4
TOPBP1-206ENST00000508524 CORO2BQ9UQ03 480 aa6.31□□□□□ -1.4
TOPBP1-206ENST00000508524 HPSEQ9Y251 543 aa6.31□□□□□ -1.4
TOPBP1-206ENST00000508524 SLC27A6Q9Y2P4 619 aa6.31□□□□□ -1.4
TOPBP1-206ENST00000508524 SNX13Q9Y5W8 968 aa6.31□□□□□ -1.4
TOPBP1-206ENST00000508524 E5RJQ4 531 aa6.3□□□□□ -1.4
TOPBP1-206ENST00000508524 H3BNC9 293 aa6.3□□□□□ -1.4
TOPBP1-206ENST00000508524 FOXN3O00409 490 aaPredicted RBP6.3□□□□□ -1.4
TOPBP1-206ENST00000508524 PPM1GO15355 546 aaPredicted RBP6.3□□□□□ -1.4
TOPBP1-206ENST00000508524 IL18RAPO95256 599 aa6.3□□□□□ -1.4
TOPBP1-206ENST00000508524 CD19P15391 556 aa6.3□□□□□ -1.4
TOPBP1-206ENST00000508524 RBL1P28749 1068 aa6.3□□□□□ -1.4
TOPBP1-206ENST00000508524 PIK3CBP42338 1070 aa6.3□□□□□ -1.4
TOPBP1-206ENST00000508524 FHL3Q13643 280 aa6.3□□□□□ -1.4
TOPBP1-206ENST00000508524 C4orf46Q504U0 113 aa6.3□□□□□ -1.4
TOPBP1-206ENST00000508524 MEX3CQ5U5Q3 659 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-206ENST00000508524 TMEM65Q6PI78 240 aa6.3□□□□□ -1.4
TOPBP1-206ENST00000508524 CLEC9AQ6UXN8 241 aa6.3□□□□□ -1.4
TOPBP1-206ENST00000508524 DCDC5Q6ZRR9 648 aa6.3□□□□□ -1.4
TOPBP1-206ENST00000508524 CNGA4Q8IV77 575 aa6.3□□□□□ -1.4
TOPBP1-206ENST00000508524 EDC3Q96F86 508 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-206ENST00000508524 KAZALD1Q96I82 304 aa6.3□□□□□ -1.4
TOPBP1-206ENST00000508524 TBC1D23Q9NUY8 699 aa6.3□□□□□ -1.4
TOPBP1-206ENST00000508524 COL15A1P39059 1388 aa6.3□□□□□ -1.4
TOPBP1-206ENST00000508524 A0A087WZ62 844 aa6.29□□□□□ -1.4
TOPBP1-206ENST00000508524 RHPN2P1A8MT19 583 aa6.29□□□□□ -1.4
TOPBP1-206ENST00000508524 FCHO1O14526 889 aa6.29□□□□□ -1.4
TOPBP1-206ENST00000508524 MOSPD3O75425 235 aa6.29□□□□□ -1.4
TOPBP1-206ENST00000508524 ATP5F1P24539 256 aaPredicted RBP6.29□□□□□ -1.4
TOPBP1-206ENST00000508524 CFHR3Q02985 330 aa6.29□□□□□ -1.4
TOPBP1-206ENST00000508524 ZNF268Q14587 947 aaPredicted RBP6.29□□□□□ -1.4
TOPBP1-206ENST00000508524 CLCA4Q14CN2 919 aa6.29□□□□□ -1.4
TOPBP1-206ENST00000508524 SEC23BQ15437 767 aa6.29□□□□□ -1.4
TOPBP1-206ENST00000508524 ST3GAL2Q16842 350 aa6.29□□□□□ -1.4
TOPBP1-206ENST00000508524 RNF44Q7L0R7 432 aa6.29□□□□□ -1.4
TOPBP1-206ENST00000508524 PNPLA1Q8N8W4 532 aa6.29□□□□□ -1.4
TOPBP1-206ENST00000508524 DENND1AQ8TEH3 1009 aa6.29□□□□□ -1.4
TOPBP1-206ENST00000508524 FAM227BQ96M60 508 aa6.29□□□□□ -1.4
TOPBP1-206ENST00000508524 FAM118BQ9BPY3 351 aa6.29□□□□□ -1.4
TOPBP1-206ENST00000508524 PNPLA8Q9NP80 782 aa6.29□□□□□ -1.4
TOPBP1-206ENST00000508524 ERCC6Q03468 1493 aa6.28□□□□□ -1.4
TOPBP1-206ENST00000508524 SNX2O60749 519 aa6.28□□□□□ -1.4
TOPBP1-206ENST00000508524 PQBP1O60828 265 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-206ENST00000508524 PARNO95453 639 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-206ENST00000508524 ADRA1DP25100 572 aa6.28□□□□□ -1.4
TOPBP1-206ENST00000508524 EIF4A1P60842 406 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-206ENST00000508524 ZNF543Q08ER8 600 aa6.28□□□□□ -1.4
TOPBP1-206ENST00000508524 Q4G0T1 1027 aa6.28□□□□□ -1.4
TOPBP1-206ENST00000508524 TMEM63BQ5T3F8 832 aa6.28□□□□□ -1.4
TOPBP1-206ENST00000508524 RRAGBQ5VZM2 374 aa6.28□□□□□ -1.4
TOPBP1-206ENST00000508524 KRT28Q7Z3Y7 464 aa6.28□□□□□ -1.4
TOPBP1-206ENST00000508524 C12orf76Q8N812 135 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-206ENST00000508524 MBD3L2Q8NHZ7 208 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-206ENST00000508524 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-206ENST00000508524 IQCDQ96DY2 449 aa6.28□□□□□ -1.4
TOPBP1-206ENST00000508524 KRTAP9-8Q9BYQ0 159 aa6.28□□□□□ -1.4
TOPBP1-206ENST00000508524 SCRIBQ14160 1630 aa6.28□□□□□ -1.4
TOPBP1-206ENST00000508524 SLC5A1P13866 664 aa6.27□□□□□ -1.41
TOPBP1-206ENST00000508524 GPC5P78333 572 aa6.27□□□□□ -1.41
TOPBP1-206ENST00000508524 MTAPQ13126 283 aa6.27□□□□□ -1.41
TOPBP1-206ENST00000508524 KCNB1Q14721 858 aa6.27□□□□□ -1.41
TOPBP1-206ENST00000508524 KLHDC7AQ5VTJ3 777 aa6.27□□□□□ -1.41
TOPBP1-206ENST00000508524 Q8N9P0 234 aaPredicted RBP6.27□□□□□ -1.41
TOPBP1-206ENST00000508524 HS6ST2Q96MM7 605 aa6.27□□□□□ -1.41
TOPBP1-206ENST00000508524 ZNF48Q96MX3 618 aaPredicted RBP6.27□□□□□ -1.41
TOPBP1-206ENST00000508524 SPRTNQ9H040 489 aaPredicted RBP6.27□□□□□ -1.41
TOPBP1-206ENST00000508524 ZCWPW1Q9H0M4 648 aa6.27□□□□□ -1.41
TOPBP1-206ENST00000508524 VPS16Q9H269 839 aa6.27□□□□□ -1.41
TOPBP1-206ENST00000508524 SLC25A32Q9H2D1 315 aa6.27□□□□□ -1.41
TOPBP1-206ENST00000508524 HEYLQ9NQ87 328 aaPredicted RBP6.27□□□□□ -1.41
TOPBP1-206ENST00000508524 TUBA8Q9NY65 449 aaPredicted RBP6.27□□□□□ -1.41
TOPBP1-206ENST00000508524 CLCA1A8K7I4 914 aa6.26□□□□□ -1.41
TOPBP1-206ENST00000508524 KPNA5O15131 536 aa6.26□□□□□ -1.41
TOPBP1-206ENST00000508524 THAP12O43422 761 aa6.26□□□□□ -1.41
TOPBP1-206ENST00000508524 TSHRP16473 764 aa6.26□□□□□ -1.41
TOPBP1-206ENST00000508524 PTGER1P34995 402 aa6.26□□□□□ -1.41
TOPBP1-206ENST00000508524 CASP5P51878 434 aa6.26□□□□□ -1.41
TOPBP1-206ENST00000508524 MFSD13AQ14CX5 517 aa6.26□□□□□ -1.41
TOPBP1-206ENST00000508524 TRIP6Q15654 476 aaKnown RBP6.26□□□□□ -1.41
TOPBP1-206ENST00000508524 GRHL2Q6ISB3 625 aa6.26□□□□□ -1.41
TOPBP1-206ENST00000508524 RANBP10Q6VN20 620 aa6.26□□□□□ -1.41
TOPBP1-206ENST00000508524 RNF152Q8N8N0 203 aa6.26□□□□□ -1.41
TOPBP1-206ENST00000508524 ATP11CQ8NB49 1132 aa6.26□□□□□ -1.41
TOPBP1-206ENST00000508524 NGDNQ8NEJ9 315 aaKnown RBP6.26□□□□□ -1.41
TOPBP1-206ENST00000508524 OSR1Q8TAX0 266 aaPredicted RBP6.26□□□□□ -1.41
TOPBP1-206ENST00000508524 MAP4K1Q92918 833 aa6.26□□□□□ -1.41
TOPBP1-206ENST00000508524 POM121BA6NF01 834 aa6.25□□□□□ -1.41
TOPBP1-206ENST00000508524 CLIC1O00299 241 aa6.25□□□□□ -1.41
TOPBP1-206ENST00000508524 PPEF2O14830 753 aa6.25□□□□□ -1.41
TOPBP1-206ENST00000508524 DSCR3O14972 297 aa6.25□□□□□ -1.41
TOPBP1-206ENST00000508524 CA12O43570 354 aa6.25□□□□□ -1.41
TOPBP1-206ENST00000508524 PRAMEF2O60811 474 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms