RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 GFRA2O00451 464 aa14.75□□□□□ -0.05
DDR1-260ENST00000507533 YWHAQP27348 245 aa14.75□□□□□ -0.05
DDR1-260ENST00000507533 MYO1EQ12965 1108 aa14.75□□□□□ -0.05
DDR1-260ENST00000507533 MCM6Q14566 821 aa14.75□□□□□ -0.05
DDR1-260ENST00000507533 PTPRNQ16849 979 aa14.75□□□□□ -0.05
DDR1-260ENST00000507533 HECTD3Q5T447 861 aa14.75□□□□□ -0.05
DDR1-260ENST00000507533 HS2ST1Q7LGA3 356 aa14.75□□□□□ -0.05
DDR1-260ENST00000507533 PDZD8Q8NEN9 1154 aa14.75□□□□□ -0.05
DDR1-260ENST00000507533 WBP2Q969T9 261 aa14.75□□□□□ -0.05
DDR1-260ENST00000507533 NXPE2Q96DL1 559 aa14.75□□□□□ -0.05
DDR1-260ENST00000507533 DUSP9Q99956 384 aaKnown RBP14.75□□□□□ -0.05
DDR1-260ENST00000507533 RBAKQ9NYW8 714 aaPredicted RBP14.75□□□□□ -0.05
DDR1-260ENST00000507533 USP36Q9P275 1121 aaKnown RBP14.75□□□□□ -0.05
DDR1-260ENST00000507533 CHORDC1Q9UHD1 332 aaPredicted RBP14.75□□□□□ -0.05
DDR1-260ENST00000507533 EIF2B4Q9UI10 523 aaKnown RBP14.75□□□□□ -0.05
DDR1-260ENST00000507533 R3HCC1Q9Y3T6 440 aaKnown RBP14.75□□□□□ -0.05
DDR1-260ENST00000507533 MYO18AQ92614 2054 aaKnown RBP14.75□□□□□ -0.05
DDR1-260ENST00000507533 MYOFQ9NZM1 2061 aa14.75□□□□□ -0.05
DDR1-260ENST00000507533 SHROOM3Q8TF72 1996 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 KCNJ18B7U540 433 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 NEDD8-MDP1E9PL57 170 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 RRP8O43159 456 aaKnown RBP14.74□□□□□ -0.05
DDR1-260ENST00000507533 TLX3O43711 291 aaPredicted RBP14.74□□□□□ -0.05
DDR1-260ENST00000507533 CD2BP2O95400 341 aaKnown RBP14.74□□□□□ -0.05
DDR1-260ENST00000507533 TMEM191BP0C7N4 346 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 IRF1P10914 325 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 TYRP14679 529 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 WARSP23381 471 aaKnown RBP14.74□□□□□ -0.05
DDR1-260ENST00000507533 OXTRP30559 389 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 GRK6P43250 576 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 CSNK1EP49674 416 aaKnown RBP14.74□□□□□ -0.05
DDR1-260ENST00000507533 CACNA2D1P54289 1103 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 HMGN5P82970 282 aaKnown RBP14.74□□□□□ -0.05
DDR1-260ENST00000507533 SEMG2Q02383 582 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 CFHR1Q03591 330 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 FUT11Q495W5 492 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 ZNF720Q7Z2F6 126 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 TMPRSS12Q86WS5 348 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 NUP93Q8N1F7 819 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 ENGASEQ8NFI3 743 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 FBXO32Q969P5 355 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 CALML4Q96GE6 196 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 HPDLQ96IR7 371 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 BBS2Q9BXC9 721 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 MTMR12Q9C0I1 747 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 CCSER2Q9H7U1 834 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 BLOC1S4Q9NUP1 217 aa14.74□□□□□ -0.05
DDR1-260ENST00000507533 NAV2Q8IVL1 2488 aa14.73□□□□□ -0.05
DDR1-260ENST00000507533 CAPN8A6NHC0 703 aa14.73□□□□□ -0.05
DDR1-260ENST00000507533 SLC26A4O43511 780 aa14.73□□□□□ -0.05
DDR1-260ENST00000507533 CACNG3O60359 315 aa14.73□□□□□ -0.05
DDR1-260ENST00000507533 LDHAP00338 332 aaKnown RBP14.73□□□□□ -0.05
DDR1-260ENST00000507533 STARD3Q14849 445 aa14.73□□□□□ -0.05
DDR1-260ENST00000507533 KIF19Q2TAC6 998 aa14.73□□□□□ -0.05
DDR1-260ENST00000507533 GPR155Q7Z3F1 870 aa14.73□□□□□ -0.05
DDR1-260ENST00000507533 C1orf216Q8TAB5 229 aa14.73□□□□□ -0.05
DDR1-260ENST00000507533 OVCA2Q8WZ82 227 aa14.73□□□□□ -0.05
DDR1-260ENST00000507533 HVCN1Q96D96 273 aa14.73□□□□□ -0.05
DDR1-260ENST00000507533 TMX3Q96JJ7 454 aa14.73□□□□□ -0.05
DDR1-260ENST00000507533 MMS19Q96T76 1030 aa14.73□□□□□ -0.05
DDR1-260ENST00000507533 MKRN2Q9H000 416 aaKnown RBP14.73□□□□□ -0.05
DDR1-260ENST00000507533 PDE11AQ9HCR9 933 aa14.73□□□□□ -0.05
DDR1-260ENST00000507533 TMEM30AQ9NV96 361 aa14.73□□□□□ -0.05
DDR1-260ENST00000507533 GMIPQ9P107 970 aa14.73□□□□□ -0.05
DDR1-260ENST00000507533 WDR35Q9P2L0 1181 aa14.73□□□□□ -0.05
DDR1-260ENST00000507533 SNX11Q9Y5W9 270 aa14.73□□□□□ -0.05
DDR1-260ENST00000507533 STON1Q9Y6Q2 735 aa14.73□□□□□ -0.05
DDR1-260ENST00000507533 TEX51A0A1B0GUA7 166 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 GOLGA8IPA6NC78 632 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 GOLGA8JA6NMD2 632 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 RTN3O95197 1032 aaPredicted RBP14.72□□□□□ -0.05
DDR1-260ENST00000507533 JUPP14923 745 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 GNL1P36915 607 aaPredicted RBP14.72□□□□□ -0.05
DDR1-260ENST00000507533 UBA7P41226 1012 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 DGKGP49619 791 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 TPMTP51580 245 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 AFF3P51826 1226 aaKnown RBP14.72□□□□□ -0.05
DDR1-260ENST00000507533 KCNA1Q09470 495 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 C6orf118Q5T5N4 469 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 TPGS1Q6ZTW0 290 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 NOC3LQ8WTT2 800 aaKnown RBP14.72□□□□□ -0.05
DDR1-260ENST00000507533 RAD54LQ92698 747 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 SIPA1Q96FS4 1042 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 ANKRD36BP1Q96IX9 119 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 NUP58Q9BVL2 599 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 TRIM9Q9C026 710 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 ZNF518BQ9C0D4 1074 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 ELOVL4Q9GZR5 314 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 NACA2Q9H009 215 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 SNX25Q9H3E2 840 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 EXOC7Q9UPT5 735 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 AK5Q9Y6K8 562 aa14.72□□□□□ -0.05
DDR1-260ENST00000507533 GOLGA4Q13439 2230 aaKnown RBP14.72□□□□□ -0.05
DDR1-260ENST00000507533 CLDN5O00501 218 aa14.71□□□□□ -0.05
DDR1-260ENST00000507533 KCNK3O14649 394 aa14.71□□□□□ -0.05
DDR1-260ENST00000507533 CISD3P0C7P0 127 aa14.71□□□□□ -0.05
DDR1-260ENST00000507533 PTPN1P18031 435 aaKnown RBP14.71□□□□□ -0.05
DDR1-260ENST00000507533 SF3A1Q15459 793 aaKnown RBP14.71□□□□□ -0.05
DDR1-260ENST00000507533 RILPL1Q5EBL4 403 aa14.71□□□□□ -0.05
DDR1-260ENST00000507533 SNX30Q5VWJ9 437 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms