RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 GRAMD4Q6IC98 578 aa17.43■□□□□ 0.38
SNF8-205ENST00000507302 PNPLA1Q8N8W4 532 aa17.43■□□□□ 0.38
SNF8-205ENST00000507302 OR6B3Q8NGW1 331 aa17.43■□□□□ 0.38
SNF8-205ENST00000507302 SCAMP5Q8TAC9 235 aa17.43■□□□□ 0.38
SNF8-205ENST00000507302 BBC3Q96PG8 261 aaPredicted RBP17.43■□□□□ 0.38
SNF8-205ENST00000507302 KCNK16Q96T55 309 aa17.43■□□□□ 0.38
SNF8-205ENST00000507302 VRTNQ9H8Y1 702 aa17.43■□□□□ 0.38
SNF8-205ENST00000507302 PANK4Q9NVE7 773 aa17.43■□□□□ 0.38
SNF8-205ENST00000507302 TOR4AQ9NXH8 423 aa17.43■□□□□ 0.38
SNF8-205ENST00000507302 HSPBP1Q9NZL4 362 aa17.43■□□□□ 0.38
SNF8-205ENST00000507302 CHORDC1Q9UHD1 332 aaPredicted RBP17.43■□□□□ 0.38
SNF8-205ENST00000507302 FBXO10Q9UK96 956 aa17.43■□□□□ 0.38
SNF8-205ENST00000507302 APOBEC2Q9Y235 224 aaKnown RBP17.43■□□□□ 0.38
SNF8-205ENST00000507302 SH3BP1Q9Y3L3 701 aa17.43■□□□□ 0.38
SNF8-205ENST00000507302 CKAP5Q14008 2032 aa17.42■□□□□ 0.38
SNF8-205ENST00000507302 CD2BP2O95400 341 aaKnown RBP17.42■□□□□ 0.38
SNF8-205ENST00000507302 C7P10643 843 aa17.42■□□□□ 0.38
SNF8-205ENST00000507302 WASP42768 502 aa17.42■□□□□ 0.38
SNF8-205ENST00000507302 SLC5A3P53794 718 aa17.42■□□□□ 0.38
SNF8-205ENST00000507302 ANO4Q32M45 955 aa17.42■□□□□ 0.38
SNF8-205ENST00000507302 WDR72Q3MJ13 1102 aa17.42■□□□□ 0.38
SNF8-205ENST00000507302 WDR45BQ5MNZ6 344 aa17.42■□□□□ 0.38
SNF8-205ENST00000507302 SYCP2LQ5T4T6 812 aa17.42■□□□□ 0.38
SNF8-205ENST00000507302 TMPRSS7Q7RTY8 843 aa17.42■□□□□ 0.38
SNF8-205ENST00000507302 GLIS3Q8NEA6 775 aa17.42■□□□□ 0.38
SNF8-205ENST00000507302 KLF16Q9BXK1 252 aaPredicted RBP17.42■□□□□ 0.38
SNF8-205ENST00000507302 WSB2Q9NYS7 404 aaPredicted RBP17.42■□□□□ 0.38
SNF8-205ENST00000507302 USP36Q9P275 1121 aaKnown RBP17.42■□□□□ 0.38
SNF8-205ENST00000507302 PCDHB9Q9Y5E1 797 aa17.42■□□□□ 0.38
SNF8-205ENST00000507302 CLIC4Q9Y696 253 aa17.42■□□□□ 0.38
SNF8-205ENST00000507302 FLNBO75369 2602 aaKnown RBP17.42■□□□□ 0.38
SNF8-205ENST00000507302 BPTFQ12830 3046 aa17.42■□□□□ 0.38
SNF8-205ENST00000507302 A0A087X0B3 334 aa17.41■□□□□ 0.38
SNF8-205ENST00000507302 IGLV3-19P01714 112 aa17.41■□□□□ 0.38
SNF8-205ENST00000507302 IDEP14735 1019 aa17.41■□□□□ 0.38
SNF8-205ENST00000507302 GNSP15586 552 aa17.41■□□□□ 0.38
SNF8-205ENST00000507302 ATICP31939 592 aa17.41■□□□□ 0.38
SNF8-205ENST00000507302 PGFP49763 221 aa17.41■□□□□ 0.38
SNF8-205ENST00000507302 PSMD6Q15008 389 aa17.41■□□□□ 0.38
SNF8-205ENST00000507302 LARP1BQ659C4 914 aaKnown RBP17.41■□□□□ 0.38
SNF8-205ENST00000507302 SDE2Q6IQ49 451 aa17.41■□□□□ 0.38
SNF8-205ENST00000507302 EPM2AIP1Q7L775 607 aaPredicted RBP17.41■□□□□ 0.38
SNF8-205ENST00000507302 FAM35AQ86V20 835 aa17.41■□□□□ 0.38
SNF8-205ENST00000507302 CHPFQ8IZ52 775 aa17.41■□□□□ 0.38
SNF8-205ENST00000507302 CADM4Q8NFZ8 388 aa17.41■□□□□ 0.38
SNF8-205ENST00000507302 C1orf216Q8TAB5 229 aa17.41■□□□□ 0.38
SNF8-205ENST00000507302 ZNF516Q92618 1163 aa17.41■□□□□ 0.38
SNF8-205ENST00000507302 CGRRF1Q99675 332 aa17.41■□□□□ 0.38
SNF8-205ENST00000507302 CSNK1G1Q9HCP0 422 aa17.41■□□□□ 0.38
SNF8-205ENST00000507302 CYLDQ9NQC7 956 aa17.41■□□□□ 0.38
SNF8-205ENST00000507302 DNAJC17Q9NVM6 304 aaKnown RBP17.41■□□□□ 0.38
SNF8-205ENST00000507302 PPP4R2Q9NY27 417 aa17.41■□□□□ 0.38
SNF8-205ENST00000507302 WDR35Q9P2L0 1181 aa17.41■□□□□ 0.38
SNF8-205ENST00000507302 PCDHGB2Q9Y5G2 931 aa17.41■□□□□ 0.38
SNF8-205ENST00000507302 URB1O60287 2271 aaKnown RBP17.41■□□□□ 0.38
SNF8-205ENST00000507302 KALRNO60229 2985 aa17.4■□□□□ 0.38
SNF8-205ENST00000507302 A0A1B0GTW7 788 aa17.4■□□□□ 0.38
SNF8-205ENST00000507302 A8MXQ7 604 aa17.4■□□□□ 0.38
SNF8-205ENST00000507302 EIF3DO15371 548 aaKnown RBP eCLIP17.4■□□□□ 0.38
SNF8-205ENST00000507302 TGFB1I1O43294 461 aa17.4■□□□□ 0.38
SNF8-205ENST00000507302 TYRP14679 529 aa17.4■□□□□ 0.38
SNF8-205ENST00000507302 CD6P30203 668 aa17.4■□□□□ 0.38
SNF8-205ENST00000507302 ZNF132P52740 706 aa17.4■□□□□ 0.38
SNF8-205ENST00000507302 BNC1Q01954 994 aa17.4■□□□□ 0.38
SNF8-205ENST00000507302 IFRD2Q12894 506 aaPredicted RBP17.4■□□□□ 0.38
SNF8-205ENST00000507302 SNRNP35Q16560 246 aaKnown RBP17.4■□□□□ 0.38
SNF8-205ENST00000507302 CCDC73Q6ZRK6 1079 aa17.4■□□□□ 0.38
SNF8-205ENST00000507302 ZMIZ2Q8NF64 920 aa17.4■□□□□ 0.38
SNF8-205ENST00000507302 MDM1Q8TC05 714 aa17.4■□□□□ 0.38
SNF8-205ENST00000507302 ZNF507Q8TCN5 953 aa17.4■□□□□ 0.38
SNF8-205ENST00000507302 P2RY11Q96G91 374 aa17.4■□□□□ 0.38
SNF8-205ENST00000507302 CLIC6Q96NY7 704 aa17.4■□□□□ 0.38
SNF8-205ENST00000507302 XPO6Q96QU8 1125 aaKnown RBP17.4■□□□□ 0.38
SNF8-205ENST00000507302 TRIM9Q9C026 710 aa17.4■□□□□ 0.38
SNF8-205ENST00000507302 SLC6A17Q9H1V8 727 aa17.4■□□□□ 0.38
SNF8-205ENST00000507302 DMAP1Q9NPF5 467 aaPredicted RBP17.4■□□□□ 0.38
SNF8-205ENST00000507302 ITM2CQ9NQX7 267 aa17.4■□□□□ 0.38
SNF8-205ENST00000507302 CACNA2D2Q9NY47 1150 aa17.4■□□□□ 0.38
SNF8-205ENST00000507302 GMIPQ9P107 970 aa17.4■□□□□ 0.38
SNF8-205ENST00000507302 ZBTB24O43167 697 aaPredicted RBP17.39■□□□□ 0.37
SNF8-205ENST00000507302 TLR5O60602 858 aa17.39■□□□□ 0.37
SNF8-205ENST00000507302 NDUFS2O75306 463 aa17.39■□□□□ 0.37
SNF8-205ENST00000507302 ACO1P21399 889 aaKnown RBP17.39■□□□□ 0.37
SNF8-205ENST00000507302 MAOBP27338 520 aa17.39■□□□□ 0.37
SNF8-205ENST00000507302 TNNC1P63316 161 aa17.39■□□□□ 0.37
SNF8-205ENST00000507302 CYP24A1Q07973 514 aa17.39■□□□□ 0.37
SNF8-205ENST00000507302 CAMK2BQ13554 666 aa17.39■□□□□ 0.37
SNF8-205ENST00000507302 Q6ZNB5 142 aa17.39■□□□□ 0.37
SNF8-205ENST00000507302 RGL4Q8IZJ4 473 aa17.39■□□□□ 0.37
SNF8-205ENST00000507302 FUKQ8N0W3 1084 aa17.39■□□□□ 0.37
SNF8-205ENST00000507302 NOC3LQ8WTT2 800 aaKnown RBP17.39■□□□□ 0.37
SNF8-205ENST00000507302 SMARCD1Q96GM5 515 aa17.39■□□□□ 0.37
SNF8-205ENST00000507302 BBS2Q9BXC9 721 aa17.39■□□□□ 0.37
SNF8-205ENST00000507302 SLC27A6Q9Y2P4 619 aa17.39■□□□□ 0.37
SNF8-205ENST00000507302 RAXQ9Y2V3 346 aa17.39■□□□□ 0.37
SNF8-205ENST00000507302 RAD54BQ9Y620 910 aa17.39■□□□□ 0.37
SNF8-205ENST00000507302 CABIN1Q9Y6J0 2220 aa17.39■□□□□ 0.37
SNF8-205ENST00000507302 A0A087WV48 116 aa17.38■□□□□ 0.37
SNF8-205ENST00000507302 NEDD8-MDP1E9PL57 170 aa17.38■□□□□ 0.37
SNF8-205ENST00000507302 TULP1O00294 542 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms