RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 CBX2Q14781 532 aaPredicted RBP10.14□□□□□ -0.79
CLCN3-205ENST00000506924 SMAD2Q15796 467 aaKnown RBP10.14□□□□□ -0.79
CLCN3-205ENST00000506924 CCDC142Q17RM4 750 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 SOWAHAQ2M3V2 549 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 DCAF17Q5H9S7 520 aaPredicted RBP10.14□□□□□ -0.79
CLCN3-205ENST00000506924 LIN9Q5TKA1 542 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 TCERG1LQ5VWI1 586 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 SPOPLQ6IQ16 392 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 SLC8B1Q6J4K2 584 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 CES5AQ6NT32 575 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 TTI2Q6NXR4 508 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 FBXL19Q6PCT2 694 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 SCARA5Q6ZMJ2 495 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 INTS8Q75QN2 995 aaKnown RBP10.14□□□□□ -0.79
CLCN3-205ENST00000506924 OSTM1Q86WC4 334 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 CREBRFQ8IUR6 639 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 FAM20CQ8IXL6 584 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 GOLM1Q8NBJ4 401 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 TP53INP1Q96A56 240 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 RPGRIP1Q96KN7 1286 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 PI4K2AQ9BTU6 479 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 NT5C1AQ9BXI3 368 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 GTPBP4Q9BZE4 634 aaKnown RBP10.14□□□□□ -0.79
CLCN3-205ENST00000506924 POMKQ9H5K3 350 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 PIDD1Q9HB75 910 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 CYP4F11Q9HBI6 524 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 TPSG1Q9NRR2 321 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 ADAMTS1Q9UHI8 967 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 C2orf16Q68DN1 1984 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 PRRG1O14668 218 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 MAPK13O15264 365 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 SOAT2O75908 522 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 ABLIM3O94929 683 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 VNN2O95498 520 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 BPNT1O95861 308 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 HLA-DRAP01903 254 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 PDGFRBP09619 1106 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 ELF1P32519 619 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 PIK3CAP42336 1068 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 ASPAP45381 313 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 RAP1GAPP47736 663 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 CDH8P55286 799 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 TNNC1P63316 161 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 NTHL1P78549 312 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 ITIH3Q06033 890 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 ZNF699Q32M78 642 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 DPCR1Q3MIW9 517 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 WDR72Q3MJ13 1102 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 ZACNQ401N2 412 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 CCDC40Q4G0X9 1142 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 SLC39A12Q504Y0 691 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 ZNF394Q53GI3 561 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 PPM1LQ5SGD2 360 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 ATAT1Q5SQI0 421 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 LRRTM3Q86VH5 581 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 ZC3H3Q8IXZ2 948 aaKnown RBP10.13□□□□□ -0.79
CLCN3-205ENST00000506924 ADGRF2Q8IZF7 708 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 THEM5Q8N1Q8 247 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 TTC9BQ8N6N2 239 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 TRIML1Q8N9V2 468 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 ATAD1Q8NBU5 361 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 ZNF461Q8TAF7 563 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 TAS1R2Q8TE23 839 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 SUSD6Q92537 303 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 SMG7Q92540 1137 aaKnown RBP10.13□□□□□ -0.79
CLCN3-205ENST00000506924 ZNF707Q96C28 371 aaPredicted RBP10.13□□□□□ -0.79
CLCN3-205ENST00000506924 MED15Q96RN5 788 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 UHRF1Q96T88 793 aaPredicted RBP10.13□□□□□ -0.79
CLCN3-205ENST00000506924 MRPL45Q9BRJ2 306 aaKnown RBP10.13□□□□□ -0.79
CLCN3-205ENST00000506924 SPON2Q9BUD6 331 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 SRRTQ9BXP5 876 aaKnown RBP10.13□□□□□ -0.79
CLCN3-205ENST00000506924 XYLT2Q9H1B5 865 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 PLEKHA4Q9H4M7 779 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 ACSS3Q9H6R3 686 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 CD320Q9NPF0 282 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 TMLHEQ9NVH6 421 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 HCFC1R1Q9NWW0 138 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 GDAP2Q9NXN4 497 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 DDX43Q9NXZ2 648 aaKnown RBP10.13□□□□□ -0.79
CLCN3-205ENST00000506924 DSEQ9UL01 958 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 VCANP13611 3396 aa10.13□□□□□ -0.79
CLCN3-205ENST00000506924 A0A0C4DFX4 3053 aa10.12□□□□□ -0.79
CLCN3-205ENST00000506924 BICDL2A1A5D9 508 aa10.12□□□□□ -0.79
CLCN3-205ENST00000506924 ARHGEF37A1IGU5 675 aa10.12□□□□□ -0.79
CLCN3-205ENST00000506924 OR6C75A6NL08 312 aa10.12□□□□□ -0.79
CLCN3-205ENST00000506924 GFRA2O00451 464 aa10.12□□□□□ -0.79
CLCN3-205ENST00000506924 IKBKBO14920 756 aa10.12□□□□□ -0.79
CLCN3-205ENST00000506924 SLC16A3O15427 465 aaKnown RBP10.12□□□□□ -0.79
CLCN3-205ENST00000506924 ATP2C2O75185 946 aa10.12□□□□□ -0.79
CLCN3-205ENST00000506924 ATF2P15336 505 aa10.12□□□□□ -0.79
CLCN3-205ENST00000506924 PAX3P23760 479 aa10.12□□□□□ -0.79
CLCN3-205ENST00000506924 LMO2P25791 158 aa10.12□□□□□ -0.79
CLCN3-205ENST00000506924 PPP1R2P41236 205 aa10.12□□□□□ -0.79
CLCN3-205ENST00000506924 AP3M2P53677 418 aa10.12□□□□□ -0.79
CLCN3-205ENST00000506924 PSMC1P62191 440 aaKnown RBP10.12□□□□□ -0.79
CLCN3-205ENST00000506924 RACK1P63244 317 aaKnown RBP10.12□□□□□ -0.79
CLCN3-205ENST00000506924 DUSP4Q13115 394 aa10.12□□□□□ -0.79
CLCN3-205ENST00000506924 LRFN4Q6PJG9 635 aa10.12□□□□□ -0.79
CLCN3-205ENST00000506924 BNC2Q6ZN30 1099 aaPredicted RBP10.12□□□□□ -0.79
CLCN3-205ENST00000506924 GRASPQ7Z6J2 395 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms