RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 NMUR1Q9HB89 426 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 FAM207AQ9NSI2 230 aaPredicted RBP17.52■□□□□ 0.4
SNCA-209ENST00000506244 GTSE1Q9NYZ3 720 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 LSM7Q9UK45 103 aaKnown RBP17.52■□□□□ 0.4
SNCA-209ENST00000506244 STRIP2Q9ULQ0 834 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 WNT6Q9Y6F9 365 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 MIA3Q5JRA6 1907 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 F8VZ95 297 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 LCP1P13796 627 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 KRT9P35527 623 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 RGS7P49802 495 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 SNX16P57768 344 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 SYCP1Q15431 976 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 EML3Q32P44 896 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 IER5LQ5T953 404 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 BTBD8Q5XKL5 378 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 TRIM68Q6AZZ1 485 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 DPY19L2P1Q6NXN4 242 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 PMF1Q6P1K2 205 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 SCD5Q86SK9 330 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 CCDC105Q8IYK2 499 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 ZFRQ96KR1 1074 aaKnown RBP17.51■□□□□ 0.39
SNCA-209ENST00000506244 ERGIC2Q96RQ1 377 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 GANQ9H2C0 597 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 HPS4Q9NQG7 708 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 ST7Q9NRC1 585 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 OSER1Q9NX31 292 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 AJAP1Q9UKB5 411 aaPredicted RBP17.51■□□□□ 0.39
SNCA-209ENST00000506244 PCDHGC3Q9UN70 934 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 SIK3Q9Y2K2 1263 aa17.51■□□□□ 0.39
SNCA-209ENST00000506244 ARIH1Q9Y4X5 557 aaPredicted RBP17.51■□□□□ 0.39
SNCA-209ENST00000506244 FAM170BA6NMN3 283 aa17.5■□□□□ 0.39
SNCA-209ENST00000506244 FOXN3O00409 490 aaPredicted RBP17.5■□□□□ 0.39
SNCA-209ENST00000506244 CALCAP01258 141 aa17.5■□□□□ 0.39
SNCA-209ENST00000506244 ATP1A3P13637 1013 aa17.5■□□□□ 0.39
SNCA-209ENST00000506244 ARSAP15289 507 aa17.5■□□□□ 0.39
SNCA-209ENST00000506244 TARSP26639 723 aaKnown RBP17.5■□□□□ 0.39
SNCA-209ENST00000506244 GPD2P43304 727 aa17.5■□□□□ 0.39
SNCA-209ENST00000506244 PGFP49763 221 aa17.5■□□□□ 0.39
SNCA-209ENST00000506244 DAOAP59103 153 aa17.5■□□□□ 0.39
SNCA-209ENST00000506244 POLR2FP61218 127 aaKnown RBP17.5■□□□□ 0.39
SNCA-209ENST00000506244 ZXDBP98169 803 aa17.5■□□□□ 0.39
SNCA-209ENST00000506244 LRRC32Q14392 662 aa17.5■□□□□ 0.39
SNCA-209ENST00000506244 DENND1BQ6P3S1 775 aa17.5■□□□□ 0.39
SNCA-209ENST00000506244 RNF139Q8WU17 664 aa17.5■□□□□ 0.39
SNCA-209ENST00000506244 SPAG5Q96R06 1193 aa17.5■□□□□ 0.39
SNCA-209ENST00000506244 IER2Q9BTL4 223 aa17.5■□□□□ 0.39
SNCA-209ENST00000506244 ECT2Q9H8V3 914 aa17.5■□□□□ 0.39
SNCA-209ENST00000506244 ABCC13Q9NSE7 274 aa17.5■□□□□ 0.39
SNCA-209ENST00000506244 NDRG2Q9UN36 371 aaKnown RBP17.5■□□□□ 0.39
SNCA-209ENST00000506244 GOLGA6L19H0YKK7 550 aa17.49■□□□□ 0.39
SNCA-209ENST00000506244 TBX18O95935 607 aa17.49■□□□□ 0.39
SNCA-209ENST00000506244 ADH1CP00326 375 aa17.49■□□□□ 0.39
SNCA-209ENST00000506244 IRF1P10914 325 aa17.49■□□□□ 0.39
SNCA-209ENST00000506244 CD72P21854 359 aa17.49■□□□□ 0.39
SNCA-209ENST00000506244 RPS9P46781 194 aaKnown RBP17.49■□□□□ 0.39
SNCA-209ENST00000506244 SOX9P48436 509 aa17.49■□□□□ 0.39
SNCA-209ENST00000506244 RPL34P49207 117 aaKnown RBP17.49■□□□□ 0.39
SNCA-209ENST00000506244 COG7P83436 770 aa17.49■□□□□ 0.39
SNCA-209ENST00000506244 PDCLQ13371 301 aa17.49■□□□□ 0.39
SNCA-209ENST00000506244 IQCB1Q15051 598 aa17.49■□□□□ 0.39
SNCA-209ENST00000506244 APTXQ7Z2E3 356 aaKnown RBP17.49■□□□□ 0.39
SNCA-209ENST00000506244 SLC47A2Q86VL8 602 aa17.49■□□□□ 0.39
SNCA-209ENST00000506244 FMNL3Q8IVF7 1028 aa17.49■□□□□ 0.39
SNCA-209ENST00000506244 TTC8Q8TAM2 541 aa17.49■□□□□ 0.39
SNCA-209ENST00000506244 KLF16Q9BXK1 252 aaPredicted RBP17.49■□□□□ 0.39
SNCA-209ENST00000506244 IRF2BPLQ9H1B7 796 aa17.49■□□□□ 0.39
SNCA-209ENST00000506244 LHX5Q9H2C1 402 aa17.49■□□□□ 0.39
SNCA-209ENST00000506244 PDCL3Q9H2J4 239 aa17.49■□□□□ 0.39
SNCA-209ENST00000506244 CBX8Q9HC52 389 aa17.49■□□□□ 0.39
SNCA-209ENST00000506244 ACP6Q9NPH0 428 aa17.49■□□□□ 0.39
SNCA-209ENST00000506244 RASAL2Q9UJF2 1139 aa17.49■□□□□ 0.39
SNCA-209ENST00000506244 F5P12259 2224 aa17.49■□□□□ 0.39
SNCA-209ENST00000506244 GALR2O43603 387 aaPredicted RBP17.48■□□□□ 0.39
SNCA-209ENST00000506244 DCNP07585 359 aaKnown RBP17.48■□□□□ 0.39
SNCA-209ENST00000506244 PNMA6AP0CW24 399 aaPredicted RBP17.48■□□□□ 0.39
SNCA-209ENST00000506244 CLCN1P35523 988 aa17.48■□□□□ 0.39
SNCA-209ENST00000506244 KLK7P49862 253 aa17.48■□□□□ 0.39
SNCA-209ENST00000506244 PTPN5P54829 565 aa17.48■□□□□ 0.39
SNCA-209ENST00000506244 EFEMP1Q12805 493 aa17.48■□□□□ 0.39
SNCA-209ENST00000506244 BSPRYQ5W0U4 402 aa17.48■□□□□ 0.39
SNCA-209ENST00000506244 BHLHA9Q7RTU4 235 aa17.48■□□□□ 0.39
SNCA-209ENST00000506244 MIB1Q86YT6 1006 aa17.48■□□□□ 0.39
SNCA-209ENST00000506244 DTWD2Q8NBA8 298 aa17.48■□□□□ 0.39
SNCA-209ENST00000506244 IPO4Q8TEX9 1081 aaKnown RBP17.48■□□□□ 0.39
SNCA-209ENST00000506244 SLC4A5Q9BY07 1137 aa17.48■□□□□ 0.39
SNCA-209ENST00000506244 MARCH2Q9P0N8 246 aa17.48■□□□□ 0.39
SNCA-209ENST00000506244 ZNF510Q9Y2H8 683 aa17.48■□□□□ 0.39
SNCA-209ENST00000506244 COL4A3Q01955 1670 aa17.48■□□□□ 0.39
SNCA-209ENST00000506244 YJEFN3A6XGL0 299 aa17.47■□□□□ 0.39
SNCA-209ENST00000506244 E7ENQ6 273 aa17.47■□□□□ 0.39
SNCA-209ENST00000506244 PI15O43692 258 aa17.47■□□□□ 0.39
SNCA-209ENST00000506244 SERPINC1P01008 464 aa17.47■□□□□ 0.39
SNCA-209ENST00000506244 LTFP02788 710 aa17.47■□□□□ 0.39
SNCA-209ENST00000506244 CYP17A1P05093 508 aa17.47■□□□□ 0.39
SNCA-209ENST00000506244 CYP11B1P15538 503 aa17.47■□□□□ 0.39
SNCA-209ENST00000506244 GJA4P35212 333 aa17.47■□□□□ 0.39
SNCA-209ENST00000506244 STAT1P42224 750 aa17.47■□□□□ 0.39
SNCA-209ENST00000506244 GRSF1Q12849 480 aaKnown RBP eCLIP17.47■□□□□ 0.39
SNCA-209ENST00000506244 DGKKQ5KSL6 1271 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms