RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 C2CD3Q4AC94 2353 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 ICE1Q9Y2F5 2266 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 TRAV19A0A0A6YYK7 116 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 A0A1W2PQF6 199 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 C2orf78A6NCI8 922 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 B8ZZF3 427 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 FLRT2O43155 660 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 NOL4O94818 638 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 APODP05090 189 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 CKMP06732 381 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 USP17L7P0C7H9 530 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 CSH1P0DML2 217 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 CSH2P0DML3 217 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 ODC1P11926 461 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 RPS6KB1P23443 525 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 MAOBP27338 520 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 EIF2DP41214 584 aaKnown RBP7.52□□□□□ -1.21
VCAN-206ENST00000505615 TXKP42681 527 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 NPTX2P47972 431 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 KDSRQ06136 332 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 DHCR24Q15392 516 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 TLR1Q15399 786 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 DHRS13Q6UX07 377 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 LRRC69Q6ZNQ3 347 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 NLRP8Q86W28 1048 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 MIB1Q86YT6 1006 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 RGL4Q8IZJ4 473 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 C1orf216Q8TAB5 229 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 SPATA18Q8TC71 538 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 C2orf15Q8WU43 125 aaKnown RBP7.52□□□□□ -1.21
VCAN-206ENST00000505615 DNASE2BQ8WZ79 361 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 KIFAP3Q92845 792 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 NXPE2Q96DL1 559 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 WBP1Q96G27 269 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 TRMT2BQ96GJ1 504 aaKnown RBP7.52□□□□□ -1.21
VCAN-206ENST00000505615 MYRFLQ96LU7 910 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 JAKMIP1Q96N16 626 aaKnown RBP7.52□□□□□ -1.21
VCAN-206ENST00000505615 PNMA5Q96PV4 448 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 PNKPQ96T60 521 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 ZCCHC2Q9C0B9 1178 aaKnown RBP7.52□□□□□ -1.21
VCAN-206ENST00000505615 HAPLN2Q9GZV7 340 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 TMEM60Q9H2L4 133 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 GAREM1Q9H706 876 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 PLEKHA5Q9HAU0 1116 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 TRPC7Q9HCX4 862 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 TM7SF3Q9NS93 570 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 TMLHEQ9NVH6 421 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 ABI2Q9NYB9 513 aaPredicted RBP7.52□□□□□ -1.21
VCAN-206ENST00000505615 UBQLN1Q9UMX0 589 aaKnown RBP7.52□□□□□ -1.21
VCAN-206ENST00000505615 MAGED2Q9UNF1 606 aaPredicted RBP7.52□□□□□ -1.21
VCAN-206ENST00000505615 PCDHGC4Q9Y5F7 938 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 PCDHGB2Q9Y5G2 931 aa7.52□□□□□ -1.21
VCAN-206ENST00000505615 RELNP78509 3460 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 A0A1B0GTW7 788 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 CER1O95813 267 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 ADH6P28332 368 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 GRIA2P42262 883 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 MATKP42679 507 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 TNFRSF4P43489 277 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 PLA2G4AP47712 749 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 PEX3P56589 373 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 CLDN6P56747 220 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 TLE3Q04726 772 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 MCL1Q07820 350 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 SMARCB1Q12824 385 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 RESTQ13127 1097 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 MAPK7Q13164 816 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 TOB2Q14106 344 aaPredicted RBP7.51□□□□□ -1.21
VCAN-206ENST00000505615 SAFBQ15424 915 aaKnown RBP eCLIP7.51□□□□□ -1.21
VCAN-206ENST00000505615 ECM1Q16610 540 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 BLOC1S2Q6QNY1 142 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 FILIP1Q7Z7B0 1213 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 ZNF295-AS1Q8N0V1 137 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 ZCCHC9Q8N567 271 aaKnown RBP7.51□□□□□ -1.21
VCAN-206ENST00000505615 TRIM11Q96F44 468 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 KIF2CQ99661 725 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 TCHPQ9BT92 498 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 ARHGEF4Q9NR80 690 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 UXTQ9UBK9 157 aaPredicted RBP7.51□□□□□ -1.21
VCAN-206ENST00000505615 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.51□□□□□ -1.21
VCAN-206ENST00000505615 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.51□□□□□ -1.21
VCAN-206ENST00000505615 SNX14Q9Y5W7 946 aa7.51□□□□□ -1.21
VCAN-206ENST00000505615 ITPR2Q14571 2701 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 ANO9A1A5B4 782 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 MYMKA6NI61 221 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 CCDC169A6NNP5 214 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 LACTBL1A8MY62 500 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 LEFTY2O00292 366 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 PIRO00625 290 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 SCAMP3O14828 347 aaKnown RBP7.5□□□□□ -1.21
VCAN-206ENST00000505615 RRP8O43159 456 aaKnown RBP7.5□□□□□ -1.21
VCAN-206ENST00000505615 TNFSF14O43557 240 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 FAM189A1O60320 539 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 NEMFO60524 1076 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 ZNF217O75362 1048 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 TOM1L1O75674 476 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 ADRB2P07550 413 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 HOXB2P14652 356 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 GNSP15586 552 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 RPA1P27694 616 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms