RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 CKAP2Q8WWK9 683 aa13.79□□□□□ -0.2
CCSER1-205ENST00000505073 SERPINB12Q96P63 405 aa13.79□□□□□ -0.2
CCSER1-205ENST00000505073 MTUS1Q9ULD2 1270 aa13.79□□□□□ -0.2
CCSER1-205ENST00000505073 ARVCFO00192 962 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 TKTP29401 623 aaKnown RBP13.78□□□□□ -0.2
CCSER1-205ENST00000505073 KCNJ1P48048 391 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 RTN4RL1Q86UN2 441 aaPredicted RBP13.78□□□□□ -0.2
CCSER1-205ENST00000505073 CCDC25Q86WR0 208 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 NIPA2Q8N8Q9 360 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 SLC35F5Q8WV83 523 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 RMDN2Q96LZ7 410 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 RAB3IPQ96QF0 476 aaPredicted RBP13.78□□□□□ -0.2
CCSER1-205ENST00000505073 TRAIPQ9BWF2 469 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 SAGE1Q9NXZ1 904 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 TRIM33Q9UPN9 1127 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 PHF24Q9UPV7 400 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 I3L4J1 428 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 KRT1P04264 644 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 SARNPP82979 210 aaKnown RBP13.78□□□□□ -0.2
CCSER1-205ENST00000505073 MTFR1Q15390 333 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 TAF5Q15542 800 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 TAF11Q15544 211 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 CYP1B1Q16678 543 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 TRNP1Q6NT89 227 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 DSTYKQ6XUX3 929 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 ECHDC2Q86YB7 292 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 SCUBE3Q8IX30 993 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 B3GALNT2Q8NCR0 500 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 ATG4AQ8WYN0 398 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 B3GNT5Q9BYG0 378 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 MIS12Q9H081 205 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 CDC42EP4Q9H3Q1 356 aaKnown RBP13.78□□□□□ -0.2
CCSER1-205ENST00000505073 ZWILCHQ9H900 591 aa13.78□□□□□ -0.2
CCSER1-205ENST00000505073 CLDN5O00501 218 aa13.77□□□□□ -0.2
CCSER1-205ENST00000505073 LRCH4O75427 683 aa13.77□□□□□ -0.2
CCSER1-205ENST00000505073 ABL2P42684 1182 aa13.77□□□□□ -0.2
CCSER1-205ENST00000505073 CCDC15Q0P6D6 951 aa13.77□□□□□ -0.2
CCSER1-205ENST00000505073 SNX1Q13596 522 aa13.77□□□□□ -0.2
CCSER1-205ENST00000505073 RNF43Q68DV7 783 aa13.77□□□□□ -0.2
CCSER1-205ENST00000505073 ANKRD42Q8N9B4 389 aa13.77□□□□□ -0.2
CCSER1-205ENST00000505073 EXD1Q8NHP7 514 aa13.77□□□□□ -0.2
CCSER1-205ENST00000505073 HASPINQ8TF76 798 aa13.77□□□□□ -0.2
CCSER1-205ENST00000505073 SH3GL3Q99963 347 aa13.77□□□□□ -0.2
CCSER1-205ENST00000505073 FAM118BQ9BPY3 351 aa13.77□□□□□ -0.2
CCSER1-205ENST00000505073 DDX23Q9BUQ8 820 aaKnown RBP13.77□□□□□ -0.2
CCSER1-205ENST00000505073 SLC4A5Q9BY07 1137 aa13.77□□□□□ -0.2
CCSER1-205ENST00000505073 OSBPL8Q9BZF1 889 aa13.77□□□□□ -0.2
CCSER1-205ENST00000505073 R3HDM2Q9Y2K5 976 aaKnown RBP13.77□□□□□ -0.2
CCSER1-205ENST00000505073 EME2A4GXA9 379 aaPredicted RBP13.77□□□□□ -0.21
CCSER1-205ENST00000505073 KRT10P13645 584 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 CREB1P16220 341 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 IL1R2P27930 398 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 COILP38432 576 aaPredicted RBP13.77□□□□□ -0.21
CCSER1-205ENST00000505073 CALCOCO2Q13137 446 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 UPP1Q16831 310 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 SMTNL2Q2TAL5 461 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 RAB6CQ53S08 254 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 SH3PXD2AQ5TCZ1 1133 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 KIAA0319Q5VV43 1072 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 KAZNQ674X7 775 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 MFSD7Q6UXD7 560 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 CCDC105Q8IYK2 499 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 ANKRD52Q8NB46 1076 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 FNIP1Q8TF40 1166 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 RXFP2Q8WXD0 754 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 LINC01599Q8WXQ3 324 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 PGBD4Q96DM1 585 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 TNIP3Q96KP6 325 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 TGS1Q96RS0 853 aaKnown RBP13.77□□□□□ -0.21
CCSER1-205ENST00000505073 RAB6CQ9H0N0 254 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 CHST7Q9NS84 486 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 KLHL14Q9P2G3 628 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 PCSK1NQ9UHG2 260 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 A6NHS1 94 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 PAPSS1O43252 624 aaPredicted RBP13.77□□□□□ -0.21
CCSER1-205ENST00000505073 UNC5CO95185 931 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 SETSIPP0DME0 302 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 BST2Q10589 180 aaKnown RBP13.77□□□□□ -0.21
CCSER1-205ENST00000505073 TIGD5Q53EQ6 642 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 KCNT1Q5JUK3 1230 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 OLFML1Q6UWY5 402 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 TMEM110Q86TL2 294 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 ZNF598Q86UK7 904 aaKnown RBP13.77□□□□□ -0.21
CCSER1-205ENST00000505073 GDAP1Q8TB36 358 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 FBF1Q8TES7 1133 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 CLEC4CQ8WTT0 213 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 NAF1Q96HR8 494 aaKnown RBP13.77□□□□□ -0.21
CCSER1-205ENST00000505073 DEFB118Q96PH6 123 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 MLXIPLQ9NP71 852 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 KCNK9Q9NPC2 374 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 DDX43Q9NXZ2 648 aaKnown RBP13.77□□□□□ -0.21
CCSER1-205ENST00000505073 PTPN22Q9Y2R2 807 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 SQORQ9Y6N5 450 aa13.77□□□□□ -0.21
CCSER1-205ENST00000505073 TDRD15B5MCY1 1934 aaKnown RBP13.76□□□□□ -0.21
CCSER1-205ENST00000505073 GABRDO14764 452 aa13.76□□□□□ -0.21
CCSER1-205ENST00000505073 ACSL3O95573 720 aa13.76□□□□□ -0.21
CCSER1-205ENST00000505073 LINGO3P0C6S8 592 aa13.76□□□□□ -0.21
CCSER1-205ENST00000505073 LCP1P13796 627 aa13.76□□□□□ -0.21
CCSER1-205ENST00000505073 PTPN1P18031 435 aaKnown RBP13.76□□□□□ -0.21
CCSER1-205ENST00000505073 BCAT1P54687 386 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms