RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 RDXP35241 583 aaKnown RBP13.86□□□□□ -0.19
LMNA-220ENST00000504687 GJC1P36383 396 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 CACNA2D1P54289 1103 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 VCPP55072 806 aaKnown RBP13.86□□□□□ -0.19
LMNA-220ENST00000504687 MRPS25P82663 173 aaKnown RBP13.86□□□□□ -0.19
LMNA-220ENST00000504687 ADCY2Q08462 1091 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 SCAPQ12770 1279 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 BYSLQ13895 437 aaKnown RBP13.86□□□□□ -0.19
LMNA-220ENST00000504687 ZFYVE27Q5T4F4 411 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 OTUD1Q5VV17 481 aaPredicted RBP13.86□□□□□ -0.19
LMNA-220ENST00000504687 ALS2CLQ60I27 953 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 SLC9A4Q6AI14 798 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 FUT10Q6P4F1 479 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 ANKS3Q6ZW76 656 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 GPR65Q8IYL9 337 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 CCDC89Q8N998 374 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 TOP1MTQ969P6 601 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 LRRC45Q96CN5 670 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 TRIM51Q9BSJ1 452 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 SNRNP25Q9BV90 132 aaKnown RBP13.86□□□□□ -0.19
LMNA-220ENST00000504687 PPP1R12CQ9BZL4 782 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 FOXP3Q9BZS1 431 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 TSPYL1Q9H0U9 437 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 RC3H2Q9HBD1 1191 aaKnown RBP13.86□□□□□ -0.19
LMNA-220ENST00000504687 PCDH18Q9HCL0 1135 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.86□□□□□ -0.19
LMNA-220ENST00000504687 PCSK1NQ9UHG2 260 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 ATP11BQ9Y2G3 1177 aa13.86□□□□□ -0.19
LMNA-220ENST00000504687 ESYT3A0FGR9 886 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 FAM92AA1XBS5 289 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 CCDC85CA6NKD9 419 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 YJEFN3A6XGL0 299 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 TBKBP1A7MCY6 615 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 E7ENQ6 273 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 TRIM66O15016 1216 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 CST8O60676 142 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 ZNF189O75820 626 aaPredicted RBP13.85□□□□□ -0.19
LMNA-220ENST00000504687 ZFXP17010 805 aaPredicted RBP13.85□□□□□ -0.19
LMNA-220ENST00000504687 KLRC2P26717 231 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 NDUFV1P49821 464 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 CDH6P55285 790 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 ATP11AP98196 1134 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 KRT17Q04695 432 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 GPS2Q13227 327 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 GPR17Q13304 367 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 EIF4EBP2Q13542 120 aaPredicted RBP13.85□□□□□ -0.19
LMNA-220ENST00000504687 TRADDQ15628 312 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 LRRC26Q2I0M4 334 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 SMTNL2Q2TAL5 461 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 KCNT1Q5JUK3 1230 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 FAM171A1Q5VUB5 890 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 MFSD5Q6N075 450 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 SND1Q7KZF4 910 aaKnown RBP eCLIP13.85□□□□□ -0.19
LMNA-220ENST00000504687 GPRIN1Q7Z2K8 1008 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 ALLCQ8N6M5 410 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 SPPL2BQ8TCT7 592 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 IFT81Q8WYA0 676 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 ART4Q93070 314 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 PAWRQ96IZ0 340 aaKnown RBP13.85□□□□□ -0.19
LMNA-220ENST00000504687 TMEM209Q96SK2 561 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 ADAM33Q9BZ11 813 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 TXLNGYQ9BZA5 131 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 GPR62Q9BZJ7 368 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 CWH43Q9H720 699 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 KLHL11Q9NVR0 708 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 HSFX1Q9UBD0 423 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 FZD10Q9ULW2 581 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 HPCAL4Q9UM19 191 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 PRG3Q9Y2Y8 225 aaPredicted RBP13.85□□□□□ -0.19
LMNA-220ENST00000504687 PCDHB5Q9Y5E4 795 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 BACE2Q9Y5Z0 518 aa13.85□□□□□ -0.19
LMNA-220ENST00000504687 IGLV3-25P01717 112 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 AMHP03971 560 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 CD48P09326 243 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 IBSPP21815 317 aaPredicted RBP13.84□□□□□ -0.19
LMNA-220ENST00000504687 L1CAMP32004 1257 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 RPL21P46778 160 aaKnown RBP13.84□□□□□ -0.19
LMNA-220ENST00000504687 KCNJ1P48048 391 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 HCAR3P49019 387 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 SULT1E1P49888 294 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 GATMP50440 423 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 BCAR1P56945 870 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 MTMR3Q13615 1198 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 HLTFQ14527 1009 aaKnown RBP eCLIP13.84□□□□□ -0.19
LMNA-220ENST00000504687 NOMO1Q15155 1222 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 PPP1R7Q15435 360 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 CDO1Q16878 200 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 CTXN3Q4LDR2 81 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 DCAF6Q58WW2 860 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 ANKRD20A8PQ5CZ79 823 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 RHBDF2Q6PJF5 856 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 ZDHHC24Q6UX98 284 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 UBE2Q1Q7Z7E8 422 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 CMTR2Q8IYT2 770 aaKnown RBP13.84□□□□□ -0.19
LMNA-220ENST00000504687 IQCKQ8N0W5 287 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 KRT222Q8N1A0 295 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 ATG4AQ8WYN0 398 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 HSPH1Q92598 858 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 FAM149B1Q96BN6 582 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 SNF8Q96H20 258 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms