RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 IER2Q9BTL4 223 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 RAB6CQ9H0N0 254 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 SNX25Q9H3E2 840 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 RABEP2Q9H5N1 569 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 PCDH9Q9HC56 1237 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 SAE1Q9UBE0 346 aaPredicted RBP12.07□□□□□ -0.48
USP46-204ENST00000503060 ZMAT5Q9UDW3 170 aaKnown RBP12.07□□□□□ -0.48
USP46-204ENST00000503060 TBK1Q9UHD2 729 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 SRRM3A6NNA2 597 aaPredicted RBP12.07□□□□□ -0.48
USP46-204ENST00000503060 SGK1O00141 431 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 PAPSS1O43252 624 aaPredicted RBP12.07□□□□□ -0.48
USP46-204ENST00000503060 ENDOD1O94919 500 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 CCDC130P13994 396 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 LMO2P25791 158 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 SLCO1A2P46721 670 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 AUHQ13825 339 aaKnown RBP12.07□□□□□ -0.48
USP46-204ENST00000503060 CCDC14Q49A88 953 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 ANKRD52Q8NB46 1076 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 SH3TC2Q8TF17 1288 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 NELL1Q92832 810 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 NACC2Q96BF6 587 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 CALN1Q9BXU9 219 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 NACA2Q9H009 215 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 EPN3Q9H201 632 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 CNOT10Q9H9A5 744 aaKnown RBP12.07□□□□□ -0.48
USP46-204ENST00000503060 RSAD1Q9HA92 442 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 GTF2IRD1Q9UHL9 959 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 TRPV2Q9Y5S1 764 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 CDY2AQ9Y6F7 541 aa12.07□□□□□ -0.48
USP46-204ENST00000503060 CCDC163A0A0D9SF12 145 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 DCAF8L1A6NGE4 600 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 PRPSAP2O60256 369 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 ADORA2BP29275 332 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 CDH6P55285 790 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 IFI35P80217 286 aaPredicted RBP12.06□□□□□ -0.48
USP46-204ENST00000503060 BST2Q10589 180 aaKnown RBP12.06□□□□□ -0.48
USP46-204ENST00000503060 CDO1Q16878 200 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 ZNF618Q5T7W0 954 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 MFSD14CQ5VZR4 134 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 FAAH2Q6GMR7 532 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 MFSD5Q6N075 450 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 CXCL17Q6UXB2 119 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 ZDHHC17Q8IUH5 632 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 SCUBE3Q8IX30 993 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 CFAP57Q96MR6 1250 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 YIPF2Q9BWQ6 316 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 STMN4Q9H169 189 aaPredicted RBP12.06□□□□□ -0.48
USP46-204ENST00000503060 UPF3AQ9H1J1 476 aaKnown RBP12.06□□□□□ -0.48
USP46-204ENST00000503060 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.06□□□□□ -0.48
USP46-204ENST00000503060 TLL2Q9Y6L7 1015 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 APOC4-APOC2K7ER74 178 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 M0QZ92 97 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 PTGESO14684 152 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 NDC80O14777 642 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 CA12O43570 354 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 HUS1O60921 280 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 IFNB1P01574 187 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 APOC2P02655 101 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 PSMA3P25788 255 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 LRPAP1P30533 357 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 SDC4P31431 198 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 BCAT1P54687 386 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 FCGRTP55899 365 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 LILRA4P59901 499 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 ATP11AP98196 1134 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 MORF4L2Q15014 288 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 TNFAIP8L3Q5GJ75 292 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 AP1ARQ63HQ0 302 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 WDR75Q8IWA0 830 aaKnown RBP12.06□□□□□ -0.48
USP46-204ENST00000503060 ADGRF2Q8IZF7 708 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 TRIB2Q92519 343 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 DHRS1Q96LJ7 313 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 B3GNT5Q9BYG0 378 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 ARHGAP39Q9C0H5 1083 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 DNAI2Q9GZS0 605 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 PPCSQ9HAB8 311 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 RSPH14Q9UHP6 348 aa12.06□□□□□ -0.48
USP46-204ENST00000503060 PGK1P00558 417 aa12.05□□□□□ -0.48
USP46-204ENST00000503060 PECAM1P16284 738 aaPredicted RBP12.05□□□□□ -0.48
USP46-204ENST00000503060 WARSP23381 471 aaKnown RBP12.05□□□□□ -0.48
USP46-204ENST00000503060 TM4SF4P48230 202 aa12.05□□□□□ -0.48
USP46-204ENST00000503060 RPL34P49207 117 aaKnown RBP12.05□□□□□ -0.48
USP46-204ENST00000503060 CDR1P51861 262 aa12.05□□□□□ -0.48
USP46-204ENST00000503060 PPARDQ03181 441 aa12.05□□□□□ -0.48
USP46-204ENST00000503060 MMRN1Q13201 1228 aa12.05□□□□□ -0.48
USP46-204ENST00000503060 DPYSL3Q14195 570 aa12.05□□□□□ -0.48
USP46-204ENST00000503060 BOLA3Q53S33 107 aa12.05□□□□□ -0.48
USP46-204ENST00000503060 RNASEH2BQ5TBB1 312 aaKnown RBP12.05□□□□□ -0.48
USP46-204ENST00000503060 GDF6Q6KF10 455 aaPredicted RBP12.05□□□□□ -0.48
USP46-204ENST00000503060 RSPH3Q86UC2 560 aa12.05□□□□□ -0.48
USP46-204ENST00000503060 OSTM1Q86WC4 334 aa12.05□□□□□ -0.48
USP46-204ENST00000503060 RBM12BQ8IXT5 1001 aaKnown RBP12.05□□□□□ -0.48
USP46-204ENST00000503060 ARL10Q8N8L6 244 aa12.05□□□□□ -0.48
USP46-204ENST00000503060 FAM172AQ8WUF8 416 aa12.05□□□□□ -0.48
USP46-204ENST00000503060 SERPINB12Q96P63 405 aa12.05□□□□□ -0.48
USP46-204ENST00000503060 PPP1R10Q96QC0 940 aaKnown RBP12.05□□□□□ -0.48
USP46-204ENST00000503060 ZIC5Q96T25 663 aa12.05□□□□□ -0.48
USP46-204ENST00000503060 RBM15Q96T37 977 aaKnown RBP eCLIP12.05□□□□□ -0.48
USP46-204ENST00000503060 SLC7A5P2Q9GIP4 190 aa12.05□□□□□ -0.48
USP46-204ENST00000503060 C10orf88Q9H8K7 445 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms