RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 USP33Q8TEY7 942 aa16.95■□□□□ 0.3
NR1H3-227ENST00000498548 PNKPQ96T60 521 aa16.95■□□□□ 0.3
NR1H3-227ENST00000498548 ZDHHC4Q9NPG8 344 aa16.95■□□□□ 0.3
NR1H3-227ENST00000498548 SPHK2Q9NRA0 654 aa16.95■□□□□ 0.3
NR1H3-227ENST00000498548 RASAL2Q9UJF2 1139 aa16.95■□□□□ 0.3
NR1H3-227ENST00000498548 RAB23Q9ULC3 237 aa16.95■□□□□ 0.3
NR1H3-227ENST00000498548 TRIM24O15164 1050 aa16.94■□□□□ 0.3
NR1H3-227ENST00000498548 APODP05090 189 aa16.94■□□□□ 0.3
NR1H3-227ENST00000498548 VDRP11473 427 aa16.94■□□□□ 0.3
NR1H3-227ENST00000498548 TBXAS1P24557 533 aaPredicted RBP16.94■□□□□ 0.3
NR1H3-227ENST00000498548 TIE1P35590 1138 aa16.94■□□□□ 0.3
NR1H3-227ENST00000498548 TKTL1P51854 596 aa16.94■□□□□ 0.3
NR1H3-227ENST00000498548 GAD2Q05329 585 aa16.94■□□□□ 0.3
NR1H3-227ENST00000498548 RAB41Q5JT25 222 aa16.94■□□□□ 0.3
NR1H3-227ENST00000498548 TPGS1Q6ZTW0 290 aa16.94■□□□□ 0.3
NR1H3-227ENST00000498548 HTR3DQ70Z44 454 aa16.94■□□□□ 0.3
NR1H3-227ENST00000498548 CEP68Q76N32 757 aa16.94■□□□□ 0.3
NR1H3-227ENST00000498548 MIB1Q86YT6 1006 aa16.94■□□□□ 0.3
NR1H3-227ENST00000498548 TRIML1Q8N9V2 468 aa16.94■□□□□ 0.3
NR1H3-227ENST00000498548 TFAP2BQ92481 460 aa16.94■□□□□ 0.3
NR1H3-227ENST00000498548 MED15Q96RN5 788 aa16.94■□□□□ 0.3
NR1H3-227ENST00000498548 ULBP1Q9BZM6 244 aa16.94■□□□□ 0.3
NR1H3-227ENST00000498548 UBXN6Q9BZV1 441 aa16.94■□□□□ 0.3
NR1H3-227ENST00000498548 ARHGEF4Q9NR80 690 aa16.94■□□□□ 0.3
NR1H3-227ENST00000498548 DNMT3LQ9UJW3 386 aa16.94■□□□□ 0.3
NR1H3-227ENST00000498548 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.94■□□□□ 0.3
NR1H3-227ENST00000498548 CFAP54Q96N23 3096 aa16.94■□□□□ 0.3
NR1H3-227ENST00000498548 RALGAPA1Q6GYQ0 2036 aa16.93■□□□□ 0.3
NR1H3-227ENST00000498548 PIK3R2O00459 728 aa16.93■□□□□ 0.3
NR1H3-227ENST00000498548 PMM2O15305 246 aa16.93■□□□□ 0.3
NR1H3-227ENST00000498548 KAT7O95251 611 aa16.93■□□□□ 0.3
NR1H3-227ENST00000498548 GNA14O95837 355 aa16.93■□□□□ 0.3
NR1H3-227ENST00000498548 AFPP02771 609 aaKnown RBP16.93■□□□□ 0.3
NR1H3-227ENST00000498548 RALAP11233 206 aa16.93■□□□□ 0.3
NR1H3-227ENST00000498548 HOXA6P31267 233 aa16.93■□□□□ 0.3
NR1H3-227ENST00000498548 PLA2G4AP47712 749 aa16.93■□□□□ 0.3
NR1H3-227ENST00000498548 EFEMP1Q12805 493 aa16.93■□□□□ 0.3
NR1H3-227ENST00000498548 FOXR2Q6PJQ5 311 aa16.93■□□□□ 0.3
NR1H3-227ENST00000498548 SYT13Q7L8C5 426 aa16.93■□□□□ 0.3
NR1H3-227ENST00000498548 SECISBP2LQ93073 1101 aaKnown RBP16.93■□□□□ 0.3
NR1H3-227ENST00000498548 OTUB2Q96DC9 234 aa16.93■□□□□ 0.3
NR1H3-227ENST00000498548 ZSWIM1Q9BR11 485 aa16.93■□□□□ 0.3
NR1H3-227ENST00000498548 FAM124BQ9H5Z6 455 aaPredicted RBP16.93■□□□□ 0.3
NR1H3-227ENST00000498548 PARD6AQ9NPB6 346 aa16.93■□□□□ 0.3
NR1H3-227ENST00000498548 HESX1Q9UBX0 185 aa16.93■□□□□ 0.3
NR1H3-227ENST00000498548 GMEB2Q9UKD1 530 aa16.93■□□□□ 0.3
NR1H3-227ENST00000498548 OTOGLQ3ZCN5 2332 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 MYO18AQ92614 2054 aaKnown RBP16.92■□□□□ 0.3
NR1H3-227ENST00000498548 O00370 1275 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 XPO1O14980 1071 aaKnown RBP16.92■□□□□ 0.3
NR1H3-227ENST00000498548 P4HA2O15460 535 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 STC2O76061 302 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 LCP1P13796 627 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 BRD2P25440 801 aaKnown RBP16.92■□□□□ 0.3
NR1H3-227ENST00000498548 CNR2P34972 360 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 ANP32AP39687 249 aaKnown RBP16.92■□□□□ 0.3
NR1H3-227ENST00000498548 PSEN1P49768 467 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 RGS7P49802 495 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 BCAT1P54687 386 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 MARSP56192 900 aaKnown RBP16.92■□□□□ 0.3
NR1H3-227ENST00000498548 SLC8A3P57103 927 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 YWHAGP61981 247 aaKnown RBP eCLIP16.92■□□□□ 0.3
NR1H3-227ENST00000498548 SPEM2Q0P670 501 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 BST2Q10589 180 aaKnown RBP16.92■□□□□ 0.3
NR1H3-227ENST00000498548 CETN1Q12798 172 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 BTBD8Q5XKL5 378 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 PHTF2Q8N3S3 785 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 BHMTQ93088 406 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 KREMEN1Q96MU8 473 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 INTS2Q9H0H0 1204 aaKnown RBP16.92■□□□□ 0.3
NR1H3-227ENST00000498548 LRRC4Q9HBW1 653 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 RWDD2AQ9UIY3 292 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 LSM7Q9UK45 103 aaKnown RBP16.92■□□□□ 0.3
NR1H3-227ENST00000498548 INVSQ9Y283 1065 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 EP300Q09472 2414 aaPredicted RBP16.92■□□□□ 0.3
NR1H3-227ENST00000498548 GPR179Q6PRD1 2367 aa16.92■□□□□ 0.3
NR1H3-227ENST00000498548 NEDD8-MDP1E9PL57 170 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 AXIN1O15169 862 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 HOXC11O43248 304 aaPredicted RBP16.91■□□□□ 0.3
NR1H3-227ENST00000498548 TULP3O75386 442 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 KLF8O95600 359 aaPredicted RBP16.91■□□□□ 0.3
NR1H3-227ENST00000498548 ZBED1O96006 694 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 KLKB1P03952 638 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 CCDC192P0DO97 292 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 HNRNPLP14866 589 aaKnown RBP eCLIP16.91■□□□□ 0.3
NR1H3-227ENST00000498548 TGM1P22735 817 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 ID4P47928 161 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 DGKEP52429 567 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 GOLGA8FQ08AF8 430 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 GOLGA8DPQ0D2H9 430 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 ADIGQ0VDE8 80 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 LAIR1Q6GTX8 287 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 KLHDC10Q6PID8 442 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 BHLHA9Q7RTU4 235 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.91■□□□□ 0.3
NR1H3-227ENST00000498548 ETFBKMTQ8IXQ9 262 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 CAMKK1Q8N5S9 505 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 FAM160A2Q8N612 972 aaPredicted RBP16.91■□□□□ 0.3
NR1H3-227ENST00000498548 ALLCQ8N6M5 410 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 RBBP8NLQ8NC74 664 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms