RNA–Protein interactions for RNA: ENST00000498353.5

NECAB3-216, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 3

Gene NECAB3, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-216ENST00000498353 ACDQ96AP0 544 aa18.52■□□□□ 0.56
NECAB3-216ENST00000498353 CDK5RAP1Q96SZ6 601 aaKnown RBP18.52■□□□□ 0.56
NECAB3-216ENST00000498353 PNKPQ96T60 521 aa18.52■□□□□ 0.56
NECAB3-216ENST00000498353 SPHK2Q9NRA0 654 aa18.52■□□□□ 0.56
NECAB3-216ENST00000498353 NCDNQ9UBB6 729 aa18.52■□□□□ 0.56
NECAB3-216ENST00000498353 HESX1Q9UBX0 185 aa18.52■□□□□ 0.56
NECAB3-216ENST00000498353 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.52■□□□□ 0.56
NECAB3-216ENST00000498353 WDR87Q6ZQQ6 2873 aa18.52■□□□□ 0.56
NECAB3-216ENST00000498353 GPR179Q6PRD1 2367 aa18.52■□□□□ 0.55
NECAB3-216ENST00000498353 MYH10P35580 1976 aa18.51■□□□□ 0.55
NECAB3-216ENST00000498353 O00370 1275 aa18.51■□□□□ 0.55
NECAB3-216ENST00000498353 XPO1O14980 1071 aaKnown RBP18.51■□□□□ 0.55
NECAB3-216ENST00000498353 HOXC11O43248 304 aaPredicted RBP18.51■□□□□ 0.55
NECAB3-216ENST00000498353 PAEPP09466 180 aa18.51■□□□□ 0.55
NECAB3-216ENST00000498353 CCDC192P0DO97 292 aa18.51■□□□□ 0.55
NECAB3-216ENST00000498353 ANP32AP39687 249 aaKnown RBP18.51■□□□□ 0.55
NECAB3-216ENST00000498353 GCNT1Q02742 428 aa18.51■□□□□ 0.55
NECAB3-216ENST00000498353 PDE4CQ08493 712 aa18.51■□□□□ 0.55
NECAB3-216ENST00000498353 SIM2Q14190 667 aaPredicted RBP18.51■□□□□ 0.55
NECAB3-216ENST00000498353 GOLGA7BQ2TAP0 167 aa18.51■□□□□ 0.55
NECAB3-216ENST00000498353 C10orf120Q5SQS8 335 aa18.51■□□□□ 0.55
NECAB3-216ENST00000498353 PM20D1Q6GTS8 502 aa18.51■□□□□ 0.55
NECAB3-216ENST00000498353 TMEM270Q6UE05 265 aa18.51■□□□□ 0.55
NECAB3-216ENST00000498353 C12orf40Q86WS4 652 aa18.51■□□□□ 0.55
NECAB3-216ENST00000498353 ARHGAP18Q8N392 663 aa18.51■□□□□ 0.55
NECAB3-216ENST00000498353 PPM1KQ8N3J5 372 aa18.51■□□□□ 0.55
NECAB3-216ENST00000498353 USP33Q8TEY7 942 aa18.51■□□□□ 0.55
NECAB3-216ENST00000498353 POLR3BQ9NW08 1133 aaPredicted RBP18.51■□□□□ 0.55
NECAB3-216ENST00000498353 LSM7Q9UK45 103 aaKnown RBP18.51■□□□□ 0.55
NECAB3-216ENST00000498353 NUDT5Q9UKK9 219 aa18.51■□□□□ 0.55
NECAB3-216ENST00000498353 RAB23Q9ULC3 237 aa18.51■□□□□ 0.55
NECAB3-216ENST00000498353 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.5■□□□□ 0.55
NECAB3-216ENST00000498353 TULP2O00295 520 aa18.5■□□□□ 0.55
NECAB3-216ENST00000498353 MDM4O15151 490 aa18.5■□□□□ 0.55
NECAB3-216ENST00000498353 KAT7O95251 611 aa18.5■□□□□ 0.55
NECAB3-216ENST00000498353 PXNP49023 591 aaPredicted RBP18.5■□□□□ 0.55
NECAB3-216ENST00000498353 TKTL1P51854 596 aa18.5■□□□□ 0.55
NECAB3-216ENST00000498353 BST2Q10589 180 aaKnown RBP18.5■□□□□ 0.55
NECAB3-216ENST00000498353 SRSF5Q13243 272 aaKnown RBP18.5■□□□□ 0.55
NECAB3-216ENST00000498353 DMC1Q14565 340 aa18.5■□□□□ 0.55
NECAB3-216ENST00000498353 PKDCCQ504Y2 493 aa18.5■□□□□ 0.55
NECAB3-216ENST00000498353 LAIR1Q6GTX8 287 aa18.5■□□□□ 0.55
NECAB3-216ENST00000498353 LCLAT1Q6UWP7 414 aa18.5■□□□□ 0.55
NECAB3-216ENST00000498353 TMEM25Q86YD3 366 aa18.5■□□□□ 0.55
NECAB3-216ENST00000498353 ETFBKMTQ8IXQ9 262 aa18.5■□□□□ 0.55
NECAB3-216ENST00000498353 KIAA2013Q8IYS2 634 aa18.5■□□□□ 0.55
NECAB3-216ENST00000498353 GPR161Q8N6U8 529 aaKnown RBP18.5■□□□□ 0.55
NECAB3-216ENST00000498353 KAT5Q92993 513 aa18.5■□□□□ 0.55
NECAB3-216ENST00000498353 MED15Q96RN5 788 aa18.5■□□□□ 0.55
NECAB3-216ENST00000498353 PCDHB4Q9Y5E5 795 aa18.5■□□□□ 0.55
NECAB3-216ENST00000498353 RNF225M0QZC1 329 aaPredicted RBP18.49■□□□□ 0.55
NECAB3-216ENST00000498353 ZBED1O96006 694 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 APODP05090 189 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 SETSIPP0DME0 302 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 GRIA2P42262 883 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 MRPS21P82921 87 aaKnown RBP18.49■□□□□ 0.55
NECAB3-216ENST00000498353 COG7P83436 770 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 MESP2Q0VG99 397 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 CNGA2Q16280 664 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 C2orf27AQ580R0 203 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 BTBD8Q5XKL5 378 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 PRR23BQ6ZRT6 265 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 CLEC17AQ6ZS10 378 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 RRAGAQ7L523 313 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 PHTF2Q8N3S3 785 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 MLKLQ8NB16 471 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 KCTD13Q8WZ19 329 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 TFAP2BQ92481 460 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 CLSTN2Q9H4D0 955 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 LRRC4Q9HBW1 653 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 ARHGEF4Q9NR80 690 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 GMEB2Q9UKD1 530 aa18.49■□□□□ 0.55
NECAB3-216ENST00000498353 MYO16Q9Y6X6 1858 aa18.48■□□□□ 0.55
NECAB3-216ENST00000498353 ANTXRLA6NF34 631 aa18.48■□□□□ 0.55
NECAB3-216ENST00000498353 STC2O76061 302 aa18.48■□□□□ 0.55
NECAB3-216ENST00000498353 TNFRSF4P43489 277 aa18.48■□□□□ 0.55
NECAB3-216ENST00000498353 SEC13P55735 322 aa18.48■□□□□ 0.55
NECAB3-216ENST00000498353 YWHAGP61981 247 aaKnown RBP eCLIP18.48■□□□□ 0.55
NECAB3-216ENST00000498353 STILQ15468 1287 aa18.48■□□□□ 0.55
NECAB3-216ENST00000498353 ANO4Q32M45 955 aa18.48■□□□□ 0.55
NECAB3-216ENST00000498353 PREPLQ4J6C6 727 aaPredicted RBP18.48■□□□□ 0.55
NECAB3-216ENST00000498353 Q6ZNB5 142 aa18.48■□□□□ 0.55
NECAB3-216ENST00000498353 BHLHA9Q7RTU4 235 aa18.48■□□□□ 0.55
NECAB3-216ENST00000498353 MIB1Q86YT6 1006 aa18.48■□□□□ 0.55
NECAB3-216ENST00000498353 ARHGEF19Q8IW93 802 aa18.48■□□□□ 0.55
NECAB3-216ENST00000498353 NAT16Q8N8M0 369 aa18.48■□□□□ 0.55
NECAB3-216ENST00000498353 UBA3Q8TBC4 463 aa18.48■□□□□ 0.55
NECAB3-216ENST00000498353 GAB3Q8WWW8 586 aa18.48■□□□□ 0.55
NECAB3-216ENST00000498353 HHIPQ96QV1 700 aa18.48■□□□□ 0.55
NECAB3-216ENST00000498353 ULBP1Q9BZM6 244 aa18.48■□□□□ 0.55
NECAB3-216ENST00000498353 MARK1Q9P0L2 795 aa18.48■□□□□ 0.55
NECAB3-216ENST00000498353 DEC1Q9P2X7 70 aa18.48■□□□□ 0.55
NECAB3-216ENST00000498353 EBF1Q9UH73 591 aa18.48■□□□□ 0.55
NECAB3-216ENST00000498353 TULP3O75386 442 aa18.47■□□□□ 0.55
NECAB3-216ENST00000498353 APBB3O95704 486 aa18.47■□□□□ 0.55
NECAB3-216ENST00000498353 RETP07949 1114 aa18.47■□□□□ 0.55
NECAB3-216ENST00000498353 CHRM1P11229 460 aaPredicted RBP18.47■□□□□ 0.55
NECAB3-216ENST00000498353 TGM1P22735 817 aa18.47■□□□□ 0.55
NECAB3-216ENST00000498353 KIR2DL1P43626 348 aaPredicted RBP18.47■□□□□ 0.55
NECAB3-216ENST00000498353 ZNF132P52740 706 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms