RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 LOC400499M0QZD8 3231 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 FAM92AA1XBS5 289 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 A8MXQ7 604 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 CLDN5O00501 218 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 ZDHHC11BP0C7U3 371 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 NDUFV2P19404 249 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 WASP42768 502 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 TNNC1P63316 161 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 PLEKHG6Q3KR16 790 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 SYCP2LQ5T4T6 812 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 EGFLAMQ63HQ2 1017 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 GRAMD4Q6IC98 578 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 CCNI2Q6ZMN8 369 aaPredicted RBP16.81■□□□□ 0.28
COL4A2-209ENST00000494852 CCDC65Q8IXS2 484 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 CHPFQ8IZ52 775 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 SCAMP5Q8TAC9 235 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 FOXJ1Q92949 421 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 KCNK16Q96T55 309 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 ZDHHC5Q9C0B5 715 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 CCSER2Q9H7U1 834 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 CYP8B1Q9UNU6 501 aa16.81■□□□□ 0.28
COL4A2-209ENST00000494852 ATP8B3O60423 1300 aa16.8■□□□□ 0.28
COL4A2-209ENST00000494852 A0A087X0B3 334 aa16.8■□□□□ 0.28
COL4A2-209ENST00000494852 TRIM24O15164 1050 aa16.8■□□□□ 0.28
COL4A2-209ENST00000494852 CACNG3O60359 315 aa16.8■□□□□ 0.28
COL4A2-209ENST00000494852 FTH1P19P0C7X4 201 aa16.8■□□□□ 0.28
COL4A2-209ENST00000494852 DLATP10515 647 aaKnown RBP16.8■□□□□ 0.28
COL4A2-209ENST00000494852 GNSP15586 552 aa16.8■□□□□ 0.28
COL4A2-209ENST00000494852 TNNI1P19237 187 aa16.8■□□□□ 0.28
COL4A2-209ENST00000494852 STAT6P42226 847 aa16.8■□□□□ 0.28
COL4A2-209ENST00000494852 SNRNP35Q16560 246 aaKnown RBP16.8■□□□□ 0.28
COL4A2-209ENST00000494852 FOXD4L6Q3SYB3 417 aaPredicted RBP16.8■□□□□ 0.28
COL4A2-209ENST00000494852 ATL3Q6DD88 541 aa16.8■□□□□ 0.28
COL4A2-209ENST00000494852 FOXD4L3Q6VB84 417 aaPredicted RBP16.8■□□□□ 0.28
COL4A2-209ENST00000494852 HTR3DQ70Z44 454 aa16.8■□□□□ 0.28
COL4A2-209ENST00000494852 NAXDQ8IW45 347 aa16.8■□□□□ 0.28
COL4A2-209ENST00000494852 RGL4Q8IZJ4 473 aa16.8■□□□□ 0.28
COL4A2-209ENST00000494852 XPO6Q96QU8 1125 aaKnown RBP16.8■□□□□ 0.28
COL4A2-209ENST00000494852 ACOX2Q99424 681 aa16.8■□□□□ 0.28
COL4A2-209ENST00000494852 CGRRF1Q99675 332 aa16.8■□□□□ 0.28
COL4A2-209ENST00000494852 PANK2Q9BZ23 570 aa16.8■□□□□ 0.28
COL4A2-209ENST00000494852 DNAJC17Q9NVM6 304 aaKnown RBP16.8■□□□□ 0.28
COL4A2-209ENST00000494852 CELSR3Q9NYQ7 3312 aa16.8■□□□□ 0.28
COL4A2-209ENST00000494852 IGSF10Q6WRI0 2623 aa16.8■□□□□ 0.28
COL4A2-209ENST00000494852 GFRA2O00451 464 aa16.79■□□□□ 0.28
COL4A2-209ENST00000494852 GREM1O60565 184 aa16.79■□□□□ 0.28
COL4A2-209ENST00000494852 CUTAO60888 179 aa16.79■□□□□ 0.28
COL4A2-209ENST00000494852 NDUFS2O75306 463 aa16.79■□□□□ 0.28
COL4A2-209ENST00000494852 ATICP31939 592 aa16.79■□□□□ 0.28
COL4A2-209ENST00000494852 HOXD13P35453 343 aa16.79■□□□□ 0.28
COL4A2-209ENST00000494852 SLC5A3P53794 718 aa16.79■□□□□ 0.28
COL4A2-209ENST00000494852 PSMD6Q15008 389 aa16.79■□□□□ 0.28
COL4A2-209ENST00000494852 SOWAHCQ53LP3 525 aaPredicted RBP16.79■□□□□ 0.28
COL4A2-209ENST00000494852 WDR45BQ5MNZ6 344 aa16.79■□□□□ 0.28
COL4A2-209ENST00000494852 C19orf48Q6RUI8 117 aa16.79■□□□□ 0.28
COL4A2-209ENST00000494852 GLRX5Q86SX6 157 aa16.79■□□□□ 0.28
COL4A2-209ENST00000494852 PDZD3Q86UT5 571 aa16.79■□□□□ 0.28
COL4A2-209ENST00000494852 GLIS3Q8NEA6 775 aa16.79■□□□□ 0.28
COL4A2-209ENST00000494852 SCFD1Q8WVM8 642 aa16.79■□□□□ 0.28
COL4A2-209ENST00000494852 WBP2Q969T9 261 aa16.79■□□□□ 0.28
COL4A2-209ENST00000494852 MRGPRX1Q96LB2 322 aa16.79■□□□□ 0.28
COL4A2-209ENST00000494852 CCDC86Q9H6F5 360 aaKnown RBP16.79■□□□□ 0.28
COL4A2-209ENST00000494852 DMAP1Q9NPF5 467 aaPredicted RBP16.79■□□□□ 0.28
COL4A2-209ENST00000494852 MARK1Q9P0L2 795 aa16.79■□□□□ 0.28
COL4A2-209ENST00000494852 WDR35Q9P2L0 1181 aa16.79■□□□□ 0.28
COL4A2-209ENST00000494852 NFE2L3Q9Y4A8 694 aa16.79■□□□□ 0.28
COL4A2-209ENST00000494852 PRRT4C9JH25 899 aa16.78■□□□□ 0.28
COL4A2-209ENST00000494852 NEDD8-MDP1E9PL57 170 aa16.78■□□□□ 0.28
COL4A2-209ENST00000494852 EIF3DO15371 548 aaKnown RBP eCLIP16.78■□□□□ 0.28
COL4A2-209ENST00000494852 GRIK2Q13002 908 aa16.78■□□□□ 0.28
COL4A2-209ENST00000494852 PAQR9Q6ZVX9 377 aa16.78■□□□□ 0.28
COL4A2-209ENST00000494852 METTL3Q86U44 580 aaKnown RBP16.78■□□□□ 0.28
COL4A2-209ENST00000494852 FAM35AQ86V20 835 aa16.78■□□□□ 0.28
COL4A2-209ENST00000494852 PNPLA1Q8N8W4 532 aa16.78■□□□□ 0.28
COL4A2-209ENST00000494852 RDH13Q8NBN7 331 aa16.78■□□□□ 0.28
COL4A2-209ENST00000494852 DNASE2BQ8WZ79 361 aa16.78■□□□□ 0.28
COL4A2-209ENST00000494852 SYAP1Q96A49 352 aaPredicted RBP16.78■□□□□ 0.28
COL4A2-209ENST00000494852 SMARCD1Q96GM5 515 aa16.78■□□□□ 0.28
COL4A2-209ENST00000494852 BBS2Q9BXC9 721 aa16.78■□□□□ 0.28
COL4A2-209ENST00000494852 NACA2Q9H009 215 aa16.78■□□□□ 0.28
COL4A2-209ENST00000494852 XYLT2Q9H1B5 865 aa16.78■□□□□ 0.28
COL4A2-209ENST00000494852 VRTNQ9H8Y1 702 aa16.78■□□□□ 0.28
COL4A2-209ENST00000494852 GMIPQ9P107 970 aa16.78■□□□□ 0.28
COL4A2-209ENST00000494852 KIAA1522Q9P206 1035 aaPredicted RBP16.78■□□□□ 0.28
COL4A2-209ENST00000494852 NXF1Q9UBU9 619 aaKnown RBP16.78■□□□□ 0.28
COL4A2-209ENST00000494852 CFAP45Q9UL16 551 aa16.78■□□□□ 0.28
COL4A2-209ENST00000494852 APOBEC2Q9Y235 224 aaKnown RBP16.78■□□□□ 0.28
COL4A2-209ENST00000494852 TLR5O60602 858 aa16.77■□□□□ 0.28
COL4A2-209ENST00000494852 CBFA2T3O75081 653 aa16.77■□□□□ 0.28
COL4A2-209ENST00000494852 IRF1P10914 325 aa16.77■□□□□ 0.28
COL4A2-209ENST00000494852 TYRP14679 529 aa16.77■□□□□ 0.28
COL4A2-209ENST00000494852 CD6P30203 668 aa16.77■□□□□ 0.28
COL4A2-209ENST00000494852 MYL6P60660 151 aa16.77■□□□□ 0.28
COL4A2-209ENST00000494852 SNRPFP62306 86 aaKnown RBP16.77■□□□□ 0.28
COL4A2-209ENST00000494852 DNM1Q05193 864 aaKnown RBP16.77■□□□□ 0.28
COL4A2-209ENST00000494852 CYP24A1Q07973 514 aa16.77■□□□□ 0.28
COL4A2-209ENST00000494852 TRPC3Q13507 836 aa16.77■□□□□ 0.28
COL4A2-209ENST00000494852 COL28A1Q2UY09 1125 aa16.77■□□□□ 0.28
COL4A2-209ENST00000494852 SHC4Q6S5L8 630 aa16.77■□□□□ 0.28
COL4A2-209ENST00000494852 TOGARAM2Q6ZUX3 1019 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms