RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 NETO1Q8TDF5 533 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 CYFIP2Q96F07 1278 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 ZC3H10Q96K80 434 aaKnown RBP12.3□□□□□ -0.44
VTI1A-208ENST00000494728 NT5C1AQ9BXI3 368 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 KLF16Q9BXK1 252 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-208ENST00000494728 TMEM8AQ9HCN3 771 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 CYLDQ9NQC7 956 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 EBF1Q9UH73 591 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 CKAP5Q14008 2032 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 SLC9A3R1O14745 358 aaPredicted RBP12.29□□□□□ -0.44
VTI1A-208ENST00000494728 SLC30A4O14863 429 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 TULP3O75386 442 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 KLF8O95600 359 aaPredicted RBP12.29□□□□□ -0.44
VTI1A-208ENST00000494728 ADH1CP00326 375 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 KRT13P13646 458 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 ACO1P21399 889 aaKnown RBP12.29□□□□□ -0.44
VTI1A-208ENST00000494728 TIE1P35590 1138 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 MPLP40238 635 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 EIF2DP41214 584 aaKnown RBP12.29□□□□□ -0.44
VTI1A-208ENST00000494728 MXI1P50539 228 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 CRY1Q16526 586 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 EDRF1Q3B7T1 1238 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 ZC3H3Q8IXZ2 948 aaKnown RBP12.29□□□□□ -0.44
VTI1A-208ENST00000494728 FRMD1Q8N878 549 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 SLC4A11Q8NBS3 891 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 TXNDC5Q8NBS9 432 aaKnown RBP12.29□□□□□ -0.44
VTI1A-208ENST00000494728 TATDN2Q93075 761 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 CCDC47Q96A33 483 aaKnown RBP12.29□□□□□ -0.44
VTI1A-208ENST00000494728 PNKPQ96T60 521 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 RTKNQ9BST9 563 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 IMPG2Q9BZV3 1241 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 CYP3A43Q9HB55 503 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 ARHGEF4Q9NR80 690 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.29□□□□□ -0.44
VTI1A-208ENST00000494728 COMMD8Q9NX08 183 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 SCML2Q9UQR0 700 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 SH3BP1Q9Y3L3 701 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 PCDH15Q96QU1 1955 aa12.29□□□□□ -0.44
VTI1A-208ENST00000494728 FREM2Q5SZK8 3169 aa12.28□□□□□ -0.44
VTI1A-208ENST00000494728 HOXC11O43248 304 aaPredicted RBP12.28□□□□□ -0.44
VTI1A-208ENST00000494728 KIF20AO95235 890 aa12.28□□□□□ -0.44
VTI1A-208ENST00000494728 DGKEP52429 567 aa12.28□□□□□ -0.44
VTI1A-208ENST00000494728 KIF11P52732 1056 aa12.28□□□□□ -0.44
VTI1A-208ENST00000494728 RAD23BP54727 409 aa12.28□□□□□ -0.44
VTI1A-208ENST00000494728 ENPEPQ07075 957 aa12.28□□□□□ -0.44
VTI1A-208ENST00000494728 KRT39Q6A163 491 aa12.28□□□□□ -0.44
VTI1A-208ENST00000494728 FBXL13Q8NEE6 735 aa12.28□□□□□ -0.44
VTI1A-208ENST00000494728 SPATA20Q8TB22 786 aa12.28□□□□□ -0.44
VTI1A-208ENST00000494728 EXOC4Q96A65 974 aa12.28□□□□□ -0.44
VTI1A-208ENST00000494728 LOXL4Q96JB6 756 aa12.28□□□□□ -0.44
VTI1A-208ENST00000494728 CNOT6LQ96LI5 555 aaKnown RBP12.28□□□□□ -0.44
VTI1A-208ENST00000494728 DUSP9Q99956 384 aaKnown RBP12.28□□□□□ -0.44
VTI1A-208ENST00000494728 FBXO44Q9H4M3 255 aa12.28□□□□□ -0.44
VTI1A-208ENST00000494728 TLR8Q9NR97 1041 aaKnown RBP12.28□□□□□ -0.44
VTI1A-208ENST00000494728 SPHK2Q9NRA0 654 aa12.28□□□□□ -0.44
VTI1A-208ENST00000494728 CISHQ9NSE2 258 aa12.28□□□□□ -0.44
VTI1A-208ENST00000494728 TBC1D14Q9P2M4 693 aa12.28□□□□□ -0.44
VTI1A-208ENST00000494728 ATP6V1DQ9Y5K8 247 aa12.28□□□□□ -0.44
VTI1A-208ENST00000494728 NYNRINQ9P2P1 1898 aaKnown RBP12.27□□□□□ -0.44
VTI1A-208ENST00000494728 A0A0A0MRY4 1105 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 TULP2O00295 520 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 APODP05090 189 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 ZNF806P0C7X5 589 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 RARGP13631 454 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 CD44P16070 742 aaKnown RBP12.27□□□□□ -0.45
VTI1A-208ENST00000494728 RPL13P26373 211 aaKnown RBP12.27□□□□□ -0.45
VTI1A-208ENST00000494728 GTF2H1P32780 548 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 GRIA2P42262 883 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 MRPS21P82921 87 aaKnown RBP12.27□□□□□ -0.45
VTI1A-208ENST00000494728 ANO4Q32M45 955 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 AASDHQ4L235 1098 aaPredicted RBP12.27□□□□□ -0.45
VTI1A-208ENST00000494728 DCAF17Q5H9S7 520 aaPredicted RBP12.27□□□□□ -0.45
VTI1A-208ENST00000494728 PPM1JQ5JR12 505 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 ZNF658Q5TYW1 1059 aaPredicted RBP12.27□□□□□ -0.45
VTI1A-208ENST00000494728 PMS2CLQ68D20 193 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 ANKRD40Q6AI12 368 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 Q6ZNB5 142 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 TOGARAM2Q6ZUX3 1019 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 HTR3DQ70Z44 454 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 BHLHA9Q7RTU4 235 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 TTC30AQ86WT1 665 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 TERB1Q8NA31 727 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 OLIG1Q8TAK6 271 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 RLN3Q8WXF3 142 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 BHMTQ93088 406 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 OTUB2Q96DC9 234 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 ERLEC1Q96DZ1 483 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 DUSP16Q9BY84 665 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 NACA2Q9H009 215 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 PNPLA8Q9NP80 782 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 RAB20Q9NX57 234 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 PCDHA5Q9Y5H7 936 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 USP3Q9Y6I4 520 aa12.27□□□□□ -0.45
VTI1A-208ENST00000494728 NUMA1Q14980 2115 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 PATE3B3GLJ2 98 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 PRRT4C9JH25 899 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 NEDD8-MDP1E9PL57 170 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 TM4SF5O14894 197 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 STC2O76061 302 aa12.26□□□□□ -0.45
VTI1A-208ENST00000494728 KLKB1P03952 638 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms