RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 ATP8B4Q8TF62 1192 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 RUFY2Q8WXA3 655 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 ASB15Q8WXK1 588 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 ATOH1Q92858 354 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-219ENST00000494323 MAP4K1Q92918 833 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 FUBP3Q96I24 572 aaKnown RBP eCLIP5.82□□□□□ -1.48
PTCD3-219ENST00000494323 C16orf92Q96LL3 132 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 YTHDC1Q96MU7 727 aaKnown RBP5.82□□□□□ -1.48
PTCD3-219ENST00000494323 GBP4Q96PP9 640 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 TMEM209Q96SK2 561 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 MAP3K14Q99558 947 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 MXRA8Q9BRK3 442 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 LZTS2Q9BRK4 669 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 PHF7Q9BWX1 381 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-219ENST00000494323 GCM1Q9NP62 436 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 TLR9Q9NR96 1032 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 AASDHPPTQ9NRN7 309 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 TOPORSQ9NS56 1045 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-219ENST00000494323 CDH22Q9UJ99 828 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 ST3GAL5Q9UNP4 418 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 RBM8AQ9Y5S9 174 aaKnown RBP5.82□□□□□ -1.48
PTCD3-219ENST00000494323 SQORQ9Y6N5 450 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 PLXNA4Q9HCM2 1894 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 KIAA1671Q9BY89 1806 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 SMIM35A0A1B0GVV1 85 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 ZNF839A8K0R7 811 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 HIDE1A8MVS5 230 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 PRPF3O43395 683 aaKnown RBP5.81□□□□□ -1.48
PTCD3-219ENST00000494323 CCNE2O96020 404 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 MYBL2P10244 700 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 ATF2P15336 505 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 PTX3P26022 381 aaPredicted RBP5.81□□□□□ -1.48
PTCD3-219ENST00000494323 MCM5P33992 734 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 PBX3P40426 434 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 MC3RP41968 323 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 TECP42680 631 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 SARSP49591 514 aaKnown RBP5.81□□□□□ -1.48
PTCD3-219ENST00000494323 EPHB3P54753 998 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 NCKAP1LP55160 1127 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 SIGLEC14Q08ET2 396 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 ITGB3BPQ13352 177 aaPredicted RBP5.81□□□□□ -1.48
PTCD3-219ENST00000494323 PTPN21Q16825 1174 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 DUSP6Q16828 381 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 CEP55Q53EZ4 464 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 PLPP4Q5VZY2 271 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 NXNQ6DKJ4 435 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 LRRC55Q6ZSA7 311 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 SLC24A5Q71RS6 500 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 PROSER1Q86XN7 944 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 WDR75Q8IWA0 830 aaKnown RBP5.81□□□□□ -1.48
PTCD3-219ENST00000494323 CHPFQ8IZ52 775 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 TMTC2Q8N394 836 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 METTL13Q8N6R0 699 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 COLGALT1Q8NBJ5 622 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 HIPK4Q8NE63 616 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 C1orf162Q8NEQ5 155 aaPredicted RBP5.81□□□□□ -1.48
PTCD3-219ENST00000494323 TNPO1Q92973 898 aaKnown RBP5.81□□□□□ -1.48
PTCD3-219ENST00000494323 ZNF668Q96K58 619 aaPredicted RBP5.81□□□□□ -1.48
PTCD3-219ENST00000494323 SNX27Q96L92 541 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 NEK1Q96PY6 1258 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 SDF4Q9BRK5 362 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 S1PR5Q9H228 398 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 CWH43Q9H720 699 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 AGO4Q9HCK5 861 aaKnown RBP5.81□□□□□ -1.48
PTCD3-219ENST00000494323 TCF7L1Q9HCS4 588 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 ERVK-5Q9HDB9 667 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 RGS18Q9NS28 235 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 GEMIN8Q9NWZ8 242 aaKnown RBP5.81□□□□□ -1.48
PTCD3-219ENST00000494323 USP36Q9P275 1121 aaKnown RBP5.81□□□□□ -1.48
PTCD3-219ENST00000494323 FAM186AA6NE01 2351 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 COL4A6Q14031 1691 aa5.81□□□□□ -1.48
PTCD3-219ENST00000494323 FNDC1Q4ZHG4 1894 aaPredicted RBP5.81□□□□□ -1.48
PTCD3-219ENST00000494323 MYH9P35579 1960 aaKnown RBP5.8□□□□□ -1.48
PTCD3-219ENST00000494323 KDM3AQ9Y4C1 1321 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 SMCO2A6NFE2 343 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 GOLGA6L22H0YM25 854 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 SH2B2O14492 632 aaPredicted RBP5.8□□□□□ -1.48
PTCD3-219ENST00000494323 HBP1O60381 514 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 RFPL1O75677 317 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 VTNP04004 478 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 WEE2P0C1S8 567 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 RBP3P10745 1247 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 NAPAP54920 295 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 KRT85P78386 507 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 FAM189BP81408 668 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 PDCD1Q15116 288 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 PCBP2Q15366 365 aaKnown RBP eCLIP5.8□□□□□ -1.48
PTCD3-219ENST00000494323 ZNF385BQ569K4 471 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 JAKMIP3Q5VZ66 844 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 ANKRD54Q6NXT1 300 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 SYCE2Q6PIF2 218 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 ABHD15Q6UXT9 468 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 RASSF3Q86WH2 238 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 TCEAL8Q8IYN2 117 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 RNF169Q8NCN4 708 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 SUSD6Q92537 303 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 SIGLEC10Q96LC7 697 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 RIPOR3Q96MK2 946 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 TCEANC2Q96MN5 208 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 TCF25Q9BQ70 676 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms