RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-222ENST00000494012 RNF38Q9H0F5 515 aa10.48□□□□□ -0.73
MACF1-222ENST00000494012 NUCKS1Q9H1E3 243 aaKnown RBP10.48□□□□□ -0.73
MACF1-222ENST00000494012 NMUR1Q9HB89 426 aa10.48□□□□□ -0.73
MACF1-222ENST00000494012 ARHGEF3Q9NR81 526 aa10.48□□□□□ -0.73
MACF1-222ENST00000494012 ABCC13Q9NSE7 274 aa10.48□□□□□ -0.73
MACF1-222ENST00000494012 OSER1Q9NX31 292 aa10.48□□□□□ -0.73
MACF1-222ENST00000494012 SMPD4Q9NXE4 827 aa10.48□□□□□ -0.73
MACF1-222ENST00000494012 DNMT3LQ9UJW3 386 aa10.48□□□□□ -0.73
MACF1-222ENST00000494012 NOCTQ9UK39 431 aaKnown RBP10.48□□□□□ -0.73
MACF1-222ENST00000494012 STRIP2Q9ULQ0 834 aa10.48□□□□□ -0.73
MACF1-222ENST00000494012 TECTAO75443 2155 aa10.48□□□□□ -0.73
MACF1-222ENST00000494012 A0A1W2PQJ5 194 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 TMEM221A6NGB7 291 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 LRRC53A6NM62 1247 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 YJEFN3A6XGL0 299 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 E5RJQ4 531 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 E7ENQ6 273 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 M0R296 226 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 PIK3R2O00459 728 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 SLC9A3R1O14745 358 aaPredicted RBP10.47□□□□□ -0.73
MACF1-222ENST00000494012 CDH5P33151 784 aaPredicted RBP10.47□□□□□ -0.73
MACF1-222ENST00000494012 PBX1P40424 430 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 PGFP49763 221 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 ARID5AQ03989 594 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 TAF3Q5VWG9 929 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 BSPRYQ5W0U4 402 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 C1orf228Q6PIY5 440 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 TOGARAM2Q6ZUX3 1019 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 BHLHA9Q7RTU4 235 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 ZDHHC17Q8IUH5 632 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 SCUBE3Q8IX30 993 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 SIX5Q8N196 739 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 OSCP1Q8WVF1 389 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 DDX1Q92499 740 aaKnown RBP10.47□□□□□ -0.73
MACF1-222ENST00000494012 BAP1Q92560 729 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 ATP2A3Q93084 1043 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 ASIC4Q96FT7 647 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 MSANTD3Q96H12 275 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 CPXM1Q96SM3 734 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 TTYH3Q9C0H2 523 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 MFSD1Q9H3U5 465 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 EPHX3Q9H6B9 360 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 CFAP97Q9P2B7 532 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 CYTH4Q9UIA0 394 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 SH3BP1Q9Y3L3 701 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.47□□□□□ -0.731e-6■■■■□ 19.5
MACF1-222ENST00000494012 ITIH6Q6UXX5 1313 aa10.47□□□□□ -0.73
MACF1-222ENST00000494012 MIA3Q5JRA6 1907 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 E2F8A0AVK6 867 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 PRR33A8MZF0 331 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 ARNTLO00327 626 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 LTFP02788 710 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 MMEP08473 750 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 GLULP15104 373 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 IFNAR2P48551 515 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 MLLT6P55198 1093 aaPredicted RBP10.46□□□□□ -0.73
MACF1-222ENST00000494012 COG7P83436 770 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 PRKCQQ04759 706 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 EFEMP1Q12805 493 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 TRIM14Q14142 442 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 MLF2Q15773 248 aaPredicted RBP10.46□□□□□ -0.73
MACF1-222ENST00000494012 ASIC2Q16515 512 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 EFHC1Q5JVL4 640 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 TMEM31Q5JXX7 168 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 SFMBT2Q5VUG0 894 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 SPECC1LQ69YQ0 1117 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 BEND5Q7L4P6 421 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 ERICH1Q86X53 443 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 MIB1Q86YT6 1006 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 CPA6Q8N4T0 437 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 WDTC1Q8N5D0 677 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 SLC20A1Q8WUM9 679 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 EDEM1Q92611 657 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 FAM149B1Q96BN6 582 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 OTUB2Q96DC9 234 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 ZFRQ96KR1 1074 aaKnown RBP10.46□□□□□ -0.73
MACF1-222ENST00000494012 LRRC3BQ96PB8 259 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 FAM83CQ9BQN1 747 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 KLF16Q9BXK1 252 aaPredicted RBP10.46□□□□□ -0.73
MACF1-222ENST00000494012 GKN1Q9NS71 199 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 DUS2Q9NX74 493 aaKnown RBP10.46□□□□□ -0.73
MACF1-222ENST00000494012 MARCH2Q9P0N8 246 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 TBC1D14Q9P2M4 693 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 RASAL2Q9UJF2 1139 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 LSM7Q9UK45 103 aaKnown RBP10.46□□□□□ -0.73
MACF1-222ENST00000494012 CA14Q9ULX7 337 aa10.46□□□□□ -0.73
MACF1-222ENST00000494012 COL4A3Q01955 1670 aa10.45□□□□□ -0.74
MACF1-222ENST00000494012 MAN2B1O00754 1011 aa10.45□□□□□ -0.74
MACF1-222ENST00000494012 CAPN9O14815 690 aa10.45□□□□□ -0.74
MACF1-222ENST00000494012 PAPSS1O43252 624 aaPredicted RBP10.45□□□□□ -0.74
MACF1-222ENST00000494012 GPR37L1O60883 481 aa10.45□□□□□ -0.74
MACF1-222ENST00000494012 HSF2BPO75031 334 aa10.45□□□□□ -0.74
MACF1-222ENST00000494012 GABBR2O75899 941 aa10.45□□□□□ -0.74
MACF1-222ENST00000494012 NFATC1O95644 943 aa10.45□□□□□ -0.74
MACF1-222ENST00000494012 TBX18O95935 607 aa10.45□□□□□ -0.74
MACF1-222ENST00000494012 GLI1P08151 1106 aa10.45□□□□□ -0.74
MACF1-222ENST00000494012 TPM1P09493 284 aa10.45□□□□□ -0.74
MACF1-222ENST00000494012 NCAM1P13591 858 aa10.45□□□□□ -0.74
MACF1-222ENST00000494012 NSFP46459 744 aaKnown RBP10.45□□□□□ -0.74
MACF1-222ENST00000494012 KPNA1P52294 538 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms