RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 ZFP37Q9Y6Q3 630 aaPredicted RBP18.75■□□□□ 0.59
PDLIM7-208ENST00000493815 NUMBLQ9Y6R0 609 aa18.75■□□□□ 0.59
PDLIM7-208ENST00000493815 MUC3AQ02505 3323 aa18.75■□□□□ 0.59
PDLIM7-208ENST00000493815 GOLGA8SH3BPF8 625 aa18.74■□□□□ 0.59
PDLIM7-208ENST00000493815 SLC34A2O95436 690 aa18.74■□□□□ 0.59
PDLIM7-208ENST00000493815 LTFP02788 710 aa18.74■□□□□ 0.59
PDLIM7-208ENST00000493815 MMP8P22894 467 aa18.74■□□□□ 0.59
PDLIM7-208ENST00000493815 ZXDBP98169 803 aa18.74■□□□□ 0.59
PDLIM7-208ENST00000493815 BTBD8Q5XKL5 378 aa18.74■□□□□ 0.59
PDLIM7-208ENST00000493815 OLFML1Q6UWY5 402 aa18.74■□□□□ 0.59
PDLIM7-208ENST00000493815 XYLT1Q86Y38 959 aa18.74■□□□□ 0.59
PDLIM7-208ENST00000493815 ZDHHC14Q8IZN3 488 aa18.74■□□□□ 0.59
PDLIM7-208ENST00000493815 SCML4Q8N228 414 aa18.74■□□□□ 0.59
PDLIM7-208ENST00000493815 PLCD3Q8N3E9 789 aa18.74■□□□□ 0.59
PDLIM7-208ENST00000493815 LRRC3BQ96PB8 259 aa18.74■□□□□ 0.59
PDLIM7-208ENST00000493815 PLA2G2FQ9BZM2 168 aa18.74■□□□□ 0.59
PDLIM7-208ENST00000493815 ANAPC1Q9H1A4 1944 aa18.74■□□□□ 0.59
PDLIM7-208ENST00000493815 C19orf67A6NJJ6 358 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 FYNP06241 537 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 MBL2P11226 248 aaPredicted RBP18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 GABRB2P47870 512 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 PTP4A2Q12974 167 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 HTR4Q13639 388 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 ACAD10Q6JQN1 1059 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 RSRC2Q7L4I2 434 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 ARHGAP18Q8N392 663 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 RIN3Q8TB24 985 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 IRGQQ8WZA9 623 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 KCNK12Q9HB15 430 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 TDP1Q9NUW8 608 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 CLIC5Q9NZA1 410 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 ADAM22Q9P0K1 906 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 NAALADL1Q9UQQ1 740 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 DENND4CQ5VZ89 1909 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 A0A087X0T9 212 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 ANHXE9PGG2 379 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 SCAMP3O14828 347 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 OLFM2O95897 454 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 FAM228BP0C875 321 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 RALAP11233 206 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 PSEN1P49768 467 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 TUBP50607 506 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 RNASE9P60153 205 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 EFEMP1Q12805 493 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 MON1BQ7L1V2 547 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 PHF13Q86YI8 300 aaPredicted RBP18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 MIB1Q86YT6 1006 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 GJD3Q8N144 294 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 ZFP14Q9HCL3 533 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 GKN1Q9NS71 199 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 CPQQ9Y646 472 aa18.73■□□□□ 0.59
PDLIM7-208ENST00000493815 GJB6O95452 261 aa18.72■□□□□ 0.59
PDLIM7-208ENST00000493815 FTLP02792 175 aaPredicted RBP18.72■□□□□ 0.59
PDLIM7-208ENST00000493815 NCAM1P13591 858 aa18.72■□□□□ 0.59
PDLIM7-208ENST00000493815 SNX16P57768 344 aa18.72■□□□□ 0.59
PDLIM7-208ENST00000493815 SLC6A3Q01959 620 aa18.72■□□□□ 0.59
PDLIM7-208ENST00000493815 GFPT1Q06210 699 aaPredicted RBP18.72■□□□□ 0.59
PDLIM7-208ENST00000493815 GRM2Q14416 872 aa18.72■□□□□ 0.59
PDLIM7-208ENST00000493815 FAM102AQ5T9C2 384 aaPredicted RBP18.72■□□□□ 0.59
PDLIM7-208ENST00000493815 SYPL2Q5VXT5 272 aa18.72■□□□□ 0.59
PDLIM7-208ENST00000493815 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.72■□□□□ 0.59
PDLIM7-208ENST00000493815 MSANTD4Q8NCY6 345 aa18.72■□□□□ 0.59
PDLIM7-208ENST00000493815 GOLGA1Q92805 767 aa18.72■□□□□ 0.59
PDLIM7-208ENST00000493815 KHSRPQ92945 711 aaKnown RBP eCLIP18.72■□□□□ 0.59
PDLIM7-208ENST00000493815 ABCC13Q9NSE7 274 aa18.72■□□□□ 0.59
PDLIM7-208ENST00000493815 SFMBT1Q9UHJ3 866 aa18.72■□□□□ 0.59
PDLIM7-208ENST00000493815 HEPACAM2A8MVW5 462 aa18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 SART1O43290 800 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 ATP5C1P36542 298 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 YWHAZP63104 245 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 SLC7A9P82251 487 aa18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 GSE1Q14687 1217 aa18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 VITQ6UXI7 678 aa18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 TOGARAM2Q6ZUX3 1019 aa18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 MTSS1LQ765P7 747 aa18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 VPS36Q86VN1 386 aa18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 MCOLN2Q8IZK6 566 aa18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 SH3RF2Q8TEC5 729 aa18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 RNF139Q8WU17 664 aa18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 ZFRQ96KR1 1074 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 UHRF1Q96T88 793 aaPredicted RBP18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 SMOC2Q9H3U7 446 aa18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 DEF6Q9H4E7 631 aa18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 NHEJ1Q9H9Q4 299 aaPredicted RBP18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 TRPV4Q9HBA0 871 aa18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 ZMYM5Q9UJ78 669 aa18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 RASAL2Q9UJF2 1139 aa18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 TRIOO75962 3097 aa18.71■□□□□ 0.59
PDLIM7-208ENST00000493815 SOBPA7XYQ1 873 aa18.7■□□□□ 0.58
PDLIM7-208ENST00000493815 DPYSL4O14531 572 aa18.7■□□□□ 0.58
PDLIM7-208ENST00000493815 ATMINO43313 823 aaPredicted RBP18.7■□□□□ 0.58
PDLIM7-208ENST00000493815 HMBSP08397 361 aa18.7■□□□□ 0.58
PDLIM7-208ENST00000493815 IRF1P10914 325 aa18.7■□□□□ 0.58
PDLIM7-208ENST00000493815 MRE11P49959 708 aa18.7■□□□□ 0.58
PDLIM7-208ENST00000493815 RNF135Q8IUD6 432 aa18.7■□□□□ 0.58
PDLIM7-208ENST00000493815 ADAM32Q8TC27 787 aa18.7■□□□□ 0.58
PDLIM7-208ENST00000493815 WBP2Q969T9 261 aa18.7■□□□□ 0.58
PDLIM7-208ENST00000493815 POPDC2Q9HBU9 364 aa18.7■□□□□ 0.58
PDLIM7-208ENST00000493815 SPTLC3Q9NUV7 552 aa18.7■□□□□ 0.58
PDLIM7-208ENST00000493815 DNMT3LQ9UJW3 386 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms