RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 FOXRED1Q96CU9 486 aaPredicted RBP4.98□□□□□ -1.61
CLIP4-212ENST00000493551 IL17RAQ96F46 866 aa4.98□□□□□ -1.61
CLIP4-212ENST00000493551 WDR92Q96MX6 357 aa4.98□□□□□ -1.61
CLIP4-212ENST00000493551 VAT1LQ9HCJ6 419 aa4.98□□□□□ -1.61
CLIP4-212ENST00000493551 RALYQ9UKM9 306 aaKnown RBP4.98□□□□□ -1.61
CLIP4-212ENST00000493551 PLXNA3P51805 1871 aa4.98□□□□□ -1.61
CLIP4-212ENST00000493551 ADGRA3Q8IWK6 1321 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 PIEZO1Q92508 2521 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 WDFY4Q6ZS81 3184 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 ZNF318Q5VUA4 2279 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 GAGE12BA1L429 117 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 C17orf102A2RUQ5 167 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 GAGE12HA6NDE8 117 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 RNASET2O00584 256 aaKnown RBP4.97□□□□□ -1.61
CLIP4-212ENST00000493551 RNF113AO15541 343 aaKnown RBP4.97□□□□□ -1.61
CLIP4-212ENST00000493551 DAPK3O43293 454 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 EFCAB14O75071 495 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 GGPS1O95749 300 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 GLP2RO95838 553 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 SLC3A2P08195 630 aaKnown RBP4.97□□□□□ -1.61
CLIP4-212ENST00000493551 SMIM10L2AP0DMW4 78 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 SMIM10L2BP0DMW5 78 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 EDNRBP24530 442 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 CA8P35219 290 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 BMPR1AP36894 532 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 HAND2P61296 217 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 FAM189BP81408 668 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 SPOUT1Q5T280 376 aaKnown RBP4.97□□□□□ -1.61
CLIP4-212ENST00000493551 VPS53Q5VIR6 699 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 ARHGEF16Q5VV41 709 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 TMED8Q6PL24 325 aaPredicted RBP4.97□□□□□ -1.61
CLIP4-212ENST00000493551 KIAA2013Q8IYS2 634 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 TMEM105Q8N8V8 129 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 IL31RAQ8NI17 732 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 TOP1MTQ969P6 601 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 E2F7Q96AV8 911 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 DYDC2Q96IM9 177 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 SPATA33Q96N06 139 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 MPHOSPH6Q99547 160 aaKnown RBP4.97□□□□□ -1.61
CLIP4-212ENST00000493551 TMEM47Q9BQJ4 181 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 PDCD2LQ9BRP1 358 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 ZNF287Q9HBT7 754 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 SETD4Q9NVD3 440 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 POLR3BQ9NW08 1133 aaPredicted RBP4.97□□□□□ -1.61
CLIP4-212ENST00000493551 MRPL42Q9Y6G3 142 aaKnown RBP4.97□□□□□ -1.61
CLIP4-212ENST00000493551 MYH7P12883 1935 aa4.97□□□□□ -1.61
CLIP4-212ENST00000493551 NLRC5Q86WI3 1866 aa4.96□□□□□ -1.61
CLIP4-212ENST00000493551 MICAL3Q7RTP6 2002 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 PLIN4Q96Q06 1357 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 LOC730098B7Z3J9 87 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 MTSS1O43312 755 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 HIP1RO75146 1068 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 STC2O76061 302 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 F2P00734 622 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 CFBP00751 764 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 PDHBP11177 359 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 MARK3P27448 753 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 HOXA13P31271 388 aaPredicted RBP4.96□□□□□ -1.62
CLIP4-212ENST00000493551 KIR2DL3P43628 341 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 SUMO1P63165 101 aaKnown RBP4.96□□□□□ -1.62
CLIP4-212ENST00000493551 IGBP1P78318 339 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 BLOC1S1P78537 153 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 ROM1Q03395 351 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 SIGLEC14Q08ET2 396 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 FOXI1Q12951 378 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 CAMK1Q14012 370 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 STXBP2Q15833 593 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 CDC37Q16543 378 aaPredicted RBP4.96□□□□□ -1.62
CLIP4-212ENST00000493551 PTPN21Q16825 1174 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 HSDL1Q3SXM5 330 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 PLPP4Q5VZY2 271 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 BMP8AQ7Z5Y6 402 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 SERINC5Q86VE9 423 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 SESTD1Q86VW0 696 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 KBTBD3Q8NAB2 608 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 VN1R2Q8NFZ6 395 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 OTUD7AQ8TE49 926 aaPredicted RBP4.96□□□□□ -1.62
CLIP4-212ENST00000493551 POF1BQ8WVV4 589 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 PIBF1Q8WXW3 757 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 RIN2Q8WYP3 895 aaPredicted RBP4.96□□□□□ -1.62
CLIP4-212ENST00000493551 RMDN1Q96DB5 314 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 MSLNLQ96KJ4 702 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 RMDN3Q96TC7 470 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 CPPED1Q9BRF8 314 aaPredicted RBP4.96□□□□□ -1.62
CLIP4-212ENST00000493551 KATNAL1Q9BW62 490 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 NACAP1Q9BZK3 213 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 FAM49AQ9H0Q0 323 aaPredicted RBP4.96□□□□□ -1.62
CLIP4-212ENST00000493551 MFSD1Q9H3U5 465 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 TLE6Q9H808 572 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 ECHDC1Q9NTX5 307 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 KCMF1Q9P0J7 381 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.96□□□□□ -1.62
CLIP4-212ENST00000493551 PCDHA9Q9Y5H5 950 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 MYO7AQ13402 2215 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 EMSYQ7Z589 1322 aa4.96□□□□□ -1.62
CLIP4-212ENST00000493551 TRANK1O15050 2925 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 DNAJC9-AS1A6NH13 148 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 HAS3O00219 553 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 RAB11FIP3O75154 756 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 HMMRO75330 724 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms