RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 RPLP0P6Q8NHW5 317 aa13.39□□□□□ -0.27
SEC61A1-206ENST00000491668 RMDN1Q96DB5 314 aa13.39□□□□□ -0.27
SEC61A1-206ENST00000491668 CNOT6LQ96LI5 555 aaKnown RBP13.39□□□□□ -0.27
SEC61A1-206ENST00000491668 CYLDQ9NQC7 956 aa13.39□□□□□ -0.27
SEC61A1-206ENST00000491668 NCDNQ9UBB6 729 aa13.39□□□□□ -0.27
SEC61A1-206ENST00000491668 PES1O00541 588 aaKnown RBP13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 STX10O60499 249 aa13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 TLR5O60602 858 aa13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 TPM2P07951 284 aa13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 ACO1P21399 889 aaKnown RBP13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 KIF11P52732 1056 aa13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 NR1H3Q13133 447 aa13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 SIM2Q14190 667 aaPredicted RBP13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 WDR5BQ86VZ2 330 aa13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 BBS7Q8IWZ6 715 aa13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 USP33Q8TEY7 942 aa13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 P2RY11Q96G91 374 aa13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 FAXDC2Q96IV6 333 aa13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 HEXIM2Q96MH2 286 aaKnown RBP13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 MED15Q96RN5 788 aa13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 HINFPQ9BQA5 517 aa13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 KLF16Q9BXK1 252 aaPredicted RBP13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 DUSP16Q9BY84 665 aa13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 FBXO44Q9H4M3 255 aa13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 CBX8Q9HC52 389 aa13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 PNPLA8Q9NP80 782 aa13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 FANCLQ9NW38 375 aa13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 NUDT5Q9UKK9 219 aa13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 USP3Q9Y6I4 520 aa13.38□□□□□ -0.27
SEC61A1-206ENST00000491668 SPTBN2O15020 2390 aa13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 A0A1W2PQH9 124 aa13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 SLC9A3R1O14745 358 aaPredicted RBP13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 MDM4O15151 490 aa13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 ATG13O75143 517 aa13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 HNRNPLP14866 589 aaKnown RBP eCLIP13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 CUL2Q13617 745 aa13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 FBXO43Q4G163 708 aa13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 LY6G5CQ5SRR4 150 aa13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 ARHGAP17Q68EM7 881 aa13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 LAIR1Q6GTX8 287 aa13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 PRR23BQ6ZRT6 265 aa13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 SYT13Q7L8C5 426 aa13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 LUZP1Q86V48 1076 aa13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 TTC30AQ86WT1 665 aa13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 DDX42Q86XP3 938 aaKnown RBP eCLIP13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 TMEM25Q86YD3 366 aa13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 ETFBKMTQ8IXQ9 262 aa13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 CCDC150Q8NCX0 1101 aa13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 TMEM176AQ96HP8 235 aa13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 HHIPQ96QV1 700 aa13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 TLR8Q9NR97 1041 aaKnown RBP13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 SAMSN1Q9NSI8 373 aaKnown RBP13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.37□□□□□ -0.27
SEC61A1-206ENST00000491668 A0A0A0MRY4 1105 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 CCDC163A0A0D9SF12 145 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 KCNJ18B7U540 433 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 TULP2O00295 520 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 IRF1P10914 325 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 PRKCSHP14314 528 aaPredicted RBP13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 EEF1GP26641 437 aaKnown RBP13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 CNR2P34972 360 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 ID4P47928 161 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 FMO5P49326 533 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 SEC13P55735 322 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 SPEM2Q0P670 501 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 LRMPQ12912 555 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 KCNJ12Q14500 433 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 C2orf27AQ580R0 203 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 EMC10Q5UCC4 262 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 HTR3DQ70Z44 454 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 CCDC186Q7Z3E2 898 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 DHX40Q8IX18 779 aaKnown RBP13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 FAM160A2Q8N612 972 aaPredicted RBP13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 RNF214Q8ND24 703 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 LMO3Q8TAP4 145 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 ZSWIM1Q9BR11 485 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 TBC1D14Q9P2M4 693 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 HCN2Q9UL51 889 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 SLC8A2Q9UPR5 921 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 SPAG17Q6Q759 2223 aa13.36□□□□□ -0.27
SEC61A1-206ENST00000491668 TRIM24O15164 1050 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 KAT7O95251 611 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 ADH1CP00326 375 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 ADH5P11766 374 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 RARGP13631 454 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 EIF2DP41214 584 aaKnown RBP13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 KIR2DL1P43626 348 aaPredicted RBP13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 CETN1Q12798 172 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 DMC1Q14565 340 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 IQCB1Q15051 598 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 TCP11X2Q5H9J9 407 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 RAB41Q5JT25 222 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 KLHDC10Q6PID8 442 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 BHLHA9Q7RTU4 235 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 PIGZQ86VD9 579 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 CCDC33Q8N5R6 958 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 CAMKK1Q8N5S9 505 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 ANKRD52Q8NB46 1076 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 GAB3Q8WWW8 586 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms