RNA–Protein interactions for RNA: ENST00000491533.5

ACSS2-220, Transcript of acyl-CoA synthetase short chain family member 2, humanhuman

TSL 5

Gene ACSS2, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS2-220ENST00000491533 VDRP11473 427 aa12.36□□□□□ -0.43
ACSS2-220ENST00000491533 ATP5C1P36542 298 aaKnown RBP12.36□□□□□ -0.43
ACSS2-220ENST00000491533 ZNF132P52740 706 aa12.36□□□□□ -0.43
ACSS2-220ENST00000491533 GCNT1Q02742 428 aa12.36□□□□□ -0.43
ACSS2-220ENST00000491533 CETN1Q12798 172 aa12.36□□□□□ -0.43
ACSS2-220ENST00000491533 IFRD2Q12894 506 aaPredicted RBP12.36□□□□□ -0.43
ACSS2-220ENST00000491533 IQCB1Q15051 598 aa12.36□□□□□ -0.43
ACSS2-220ENST00000491533 CNGA2Q16280 664 aa12.36□□□□□ -0.43
ACSS2-220ENST00000491533 CCDC40Q4G0X9 1142 aa12.36□□□□□ -0.43
ACSS2-220ENST00000491533 SMYD5Q6GMV2 418 aa12.36□□□□□ -0.43
ACSS2-220ENST00000491533 LCLAT1Q6UWP7 414 aa12.36□□□□□ -0.43
ACSS2-220ENST00000491533 PIGZQ86VD9 579 aa12.36□□□□□ -0.43
ACSS2-220ENST00000491533 WBP2Q969T9 261 aa12.36□□□□□ -0.43
ACSS2-220ENST00000491533 NT5C1BQ96P26 610 aa12.36□□□□□ -0.43
ACSS2-220ENST00000491533 NUP210Q8TEM1 1887 aaPredicted RBP12.36□□□□□ -0.43
ACSS2-220ENST00000491533 PTPRDP23468 1912 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 CCDC163A0A0D9SF12 145 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 A0A1W2PQH9 124 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 GOLGA6L6A8MZA4 724 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 K7EQS6 105 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 O00370 1275 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 XPO1O14980 1071 aaKnown RBP12.35□□□□□ -0.43
ACSS2-220ENST00000491533 HRO43593 1189 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 GABBR2O75899 941 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 AFPP02771 609 aaKnown RBP12.35□□□□□ -0.43
ACSS2-220ENST00000491533 TPM3P06753 285 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 RARGP13631 454 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 CNR2P34972 360 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 EIF2DP41214 584 aaKnown RBP12.35□□□□□ -0.43
ACSS2-220ENST00000491533 PLA2G4AP47712 749 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 LRMPQ12912 555 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 SGO2Q562F6 1265 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 PKN3Q6P5Z2 889 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 BHLHA9Q7RTU4 235 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 SCML4Q8N228 414 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 CCDC26Q8TAB7 109 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 SLC35F5Q8WV83 523 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 KCTD13Q8WZ19 329 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 TFAP2BQ92481 460 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 KREMEN1Q96MU8 473 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 CDK5RAP1Q96SZ6 601 aaKnown RBP12.35□□□□□ -0.43
ACSS2-220ENST00000491533 ZSWIM1Q9BR11 485 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 DNMT3LQ9UJW3 386 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.35□□□□□ -0.43
ACSS2-220ENST00000491533 DMXL1Q9Y485 3027 aa12.35□□□□□ -0.43
ACSS2-220ENST00000491533 HOXC11O43248 304 aaPredicted RBP12.34□□□□□ -0.43
ACSS2-220ENST00000491533 ADH1CP00326 375 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 SLC6A11P48066 632 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 SLC8A3P57103 927 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 PDE4CQ08493 712 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 DMWDQ09019 674 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 CT47A1Q5JQC4 288 aaPredicted RBP12.34□□□□□ -0.43
ACSS2-220ENST00000491533 LY6G5CQ5SRR4 150 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 Q6ZNB5 142 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 SYT13Q7L8C5 426 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.34□□□□□ -0.43
ACSS2-220ENST00000491533 LONP2Q86WA8 852 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 TMEM25Q86YD3 366 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 BBS7Q8IWZ6 715 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 ETFBKMTQ8IXQ9 262 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 ARHGAP18Q8N392 663 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 PHTF2Q8N3S3 785 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 CAMKK1Q8N5S9 505 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 AOPEPQ8N6M6 819 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 TTC16Q8NEE8 873 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 RUBCNQ92622 972 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 KAT5Q92993 513 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 TSPAN16Q9UKR8 245 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 GREB1Q4ZG55 1949 aa12.34□□□□□ -0.43
ACSS2-220ENST00000491533 CEP250Q9BV73 2442 aa12.33□□□□□ -0.43
ACSS2-220ENST00000491533 DENND4CQ5VZ89 1909 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 TICRRQ7Z2Z1 1910 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 CACNA1AO00555 2505 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 TULP2O00295 520 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 RNF40O75150 1001 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 ZBED1O96006 694 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 ERCC5P28715 1186 aaPredicted RBP12.33□□□□□ -0.44
ACSS2-220ENST00000491533 HOXC13P31276 330 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 GRIA2P42262 883 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 TNFRSF4P43489 277 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 RPL34P49207 117 aaKnown RBP12.33□□□□□ -0.44
ACSS2-220ENST00000491533 TKTL1P51854 596 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 BCAT1P54687 386 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 MESP2Q0VG99 397 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 BST2Q10589 180 aaKnown RBP12.33□□□□□ -0.44
ACSS2-220ENST00000491533 STILQ15468 1287 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 DPCR1Q3MIW9 517 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 SARM1Q6SZW1 724 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 TMEM270Q6UE05 265 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 RRAGAQ7L523 313 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 TADA2BQ86TJ2 420 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 WDR5BQ86VZ2 330 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 ARHGEF19Q8IW93 802 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 DHX40Q8IX18 779 aaKnown RBP12.33□□□□□ -0.44
ACSS2-220ENST00000491533 PPM1KQ8N3J5 372 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 UBA3Q8TBC4 463 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 KCNV2Q8TDN2 545 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 USP33Q8TEY7 942 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 PNKPQ96T60 521 aa12.33□□□□□ -0.44
ACSS2-220ENST00000491533 TRIM5Q9C035 493 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms