RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 ZNF132P52740 706 aa11.85□□□□□ -0.51
CLCNKA-206ENST00000491433 MESP2Q0VG99 397 aa11.85□□□□□ -0.51
CLCNKA-206ENST00000491433 SERINC3Q13530 473 aa11.85□□□□□ -0.51
CLCNKA-206ENST00000491433 SURF1Q15526 300 aa11.85□□□□□ -0.51
CLCNKA-206ENST00000491433 SOWAHAQ2M3V2 549 aa11.85□□□□□ -0.51
CLCNKA-206ENST00000491433 ANO4Q32M45 955 aa11.85□□□□□ -0.51
CLCNKA-206ENST00000491433 GRAMD4Q6IC98 578 aa11.85□□□□□ -0.51
CLCNKA-206ENST00000491433 METTL3Q86U44 580 aaKnown RBP11.85□□□□□ -0.51
CLCNKA-206ENST00000491433 SLCO6A1Q86UG4 719 aa11.85□□□□□ -0.51
CLCNKA-206ENST00000491433 SFTPA1Q8IWL2 248 aa11.85□□□□□ -0.51
CLCNKA-206ENST00000491433 CHPFQ8IZ52 775 aa11.85□□□□□ -0.51
CLCNKA-206ENST00000491433 LARP4BQ92615 738 aaKnown RBP11.85□□□□□ -0.51
CLCNKA-206ENST00000491433 RAD54LQ92698 747 aa11.85□□□□□ -0.51
CLCNKA-206ENST00000491433 ACCSQ96QU6 501 aa11.85□□□□□ -0.51
CLCNKA-206ENST00000491433 DNMT3LQ9UJW3 386 aa11.85□□□□□ -0.51
CLCNKA-206ENST00000491433 A0A1W2PQF6 199 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 TISP43B9A030 160 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 K7ELQ4 463 aaPredicted RBP11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 KIAA0391O15091 583 aaKnown RBP11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 RRP8O43159 456 aaKnown RBP11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 BMP15O95972 392 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 TNNC2P02585 160 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 WARSP23381 471 aaKnown RBP11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 YWHAQP27348 245 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 CD6P30203 668 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 ADSSP30520 456 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 OXTRP30559 389 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 TUBP50607 506 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 USP46P62068 366 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 PSMC1P62191 440 aaKnown RBP11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 TAF10Q12962 218 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 CUL4AQ13619 759 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 ALCAMQ13740 583 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 BECN1Q14457 450 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 MCM6Q14566 821 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 HECTD3Q5T447 861 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 MCTP1Q6DN14 999 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 PDCD7Q8N8D1 485 aaKnown RBP11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 NAT16Q8N8M0 369 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 CADM4Q8NFZ8 388 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 DNASE2BQ8WZ79 361 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 FBXO32Q969P5 355 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 PCED1BQ96HM7 432 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 HPDLQ96IR7 371 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 GABRG3Q99928 467 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 ELOVL4Q9GZR5 314 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 ZDHHC4Q9NPG8 344 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 TM7SF3Q9NS93 570 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 WDR35Q9P2L0 1181 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 PCDHB13Q9Y5F0 798 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 RELNP78509 3460 aa11.84□□□□□ -0.51
CLCNKA-206ENST00000491433 ATMQ13315 3056 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 F8VP50 259 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 NPC1O15118 1278 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 ATP2C2O75185 946 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 GAP43P17677 238 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 DDIT3P35638 169 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 LONP1P36776 959 aaKnown RBP11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 WASP42768 502 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 GOLGA8FQ08AF8 430 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 GOLGA8DPQ0D2H9 430 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 STARD3Q14849 445 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 L1TD1Q5T7N2 865 aaKnown RBP11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 EGFLAMQ63HQ2 1017 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 HS2ST1Q7LGA3 356 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 PRICKLE2Q7Z3G6 844 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 LIMS2Q7Z4I7 341 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 SYCP3Q8IZU3 236 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 NUP93Q8N1F7 819 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 CXorf38Q8TB03 319 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 RHBDD1Q8TEB9 315 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 MRGPRX1Q96LB2 322 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 MMS19Q96T76 1030 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 MTMR12Q9C0I1 747 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 NACA2Q9H009 215 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 SNX25Q9H3E2 840 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 GAREM1Q9H706 876 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 MRPL44Q9H9J2 332 aaKnown RBP11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 CRTAC1Q9NQ79 661 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 BLOC1S4Q9NUP1 217 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 DNAJC17Q9NVM6 304 aaKnown RBP11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 COMMD8Q9NX08 183 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 ATP8B3O60423 1300 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 LRRK2Q5S007 2527 aa11.83□□□□□ -0.52
CLCNKA-206ENST00000491433 CILPO75339 1184 aa11.82□□□□□ -0.52
CLCNKA-206ENST00000491433 TACC1O75410 805 aa11.82□□□□□ -0.52
CLCNKA-206ENST00000491433 PPP1R37O75864 691 aa11.82□□□□□ -0.52
CLCNKA-206ENST00000491433 DKK1O94907 266 aa11.82□□□□□ -0.52
CLCNKA-206ENST00000491433 PDGFRBP09619 1106 aa11.82□□□□□ -0.52
CLCNKA-206ENST00000491433 NCAM1P13591 858 aa11.82□□□□□ -0.52
CLCNKA-206ENST00000491433 LMO2P25791 158 aa11.82□□□□□ -0.52
CLCNKA-206ENST00000491433 GNL1P36915 607 aaPredicted RBP11.82□□□□□ -0.52
CLCNKA-206ENST00000491433 CCDC142Q17RM4 750 aa11.82□□□□□ -0.52
CLCNKA-206ENST00000491433 MDH1BQ5I0G3 518 aa11.82□□□□□ -0.52
CLCNKA-206ENST00000491433 SNX30Q5VWJ9 437 aa11.82□□□□□ -0.52
CLCNKA-206ENST00000491433 KIAA1324Q6UXG2 1013 aaKnown RBP11.82□□□□□ -0.52
CLCNKA-206ENST00000491433 ZNF574Q6ZN55 896 aaPredicted RBP11.82□□□□□ -0.52
CLCNKA-206ENST00000491433 DBX2Q6ZNG2 339 aa11.82□□□□□ -0.52
CLCNKA-206ENST00000491433 FMNL3Q8IVF7 1028 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms