RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 MYH10P35580 1976 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 CACNA1EQ15878 2313 aa12.46□□□□□ -0.41
FDPS-215ENST00000490140 ATXN2Q99700 1313 aaKnown RBP12.45□□□□□ -0.42
FDPS-215ENST00000490140 A0A1W2PQD8 194 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 PCNX2A6NKB5 2137 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 NEDD8-MDP1E9PL57 170 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 GFRA2O00451 464 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 NPC1O15118 1278 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 CACNG3O60359 315 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 NDUFS2O75306 463 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 KIF20AO95235 890 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 ZDHHC11BP0C7U3 371 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 FAM200BP0CF97 657 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 IRF1P10914 325 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 ITPKAP23677 461 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 ATP5C1P36542 298 aaKnown RBP12.45□□□□□ -0.42
FDPS-215ENST00000490140 ZNF33AQ06730 810 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 SEMA3BQ13214 749 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 SLC14A1Q13336 389 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 STARD3Q14849 445 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 SGSM1Q2NKQ1 1148 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 WDR45BQ5MNZ6 344 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 SCARA5Q6ZMJ2 495 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 HTR3DQ70Z44 454 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 BBS7Q8IWZ6 715 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 CEP57L1Q8IYX8 460 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 NAT16Q8N8M0 369 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 KCNK16Q96T55 309 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 CCSER2Q9H7U1 834 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 TMEM30AQ9NV96 361 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 MARK1Q9P0L2 795 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 CHORDC1Q9UHD1 332 aaPredicted RBP12.45□□□□□ -0.42
FDPS-215ENST00000490140 MBD1Q9UIS9 605 aaPredicted RBP12.45□□□□□ -0.42
FDPS-215ENST00000490140 WASF3Q9UPY6 502 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 PCDHA5Q9Y5H7 936 aa12.45□□□□□ -0.42
FDPS-215ENST00000490140 ANKRD11Q6UB99 2663 aaPredicted RBP12.45□□□□□ -0.42
FDPS-215ENST00000490140 ARHGAP33O14559 1287 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 CHRM1P11229 460 aaPredicted RBP12.44□□□□□ -0.42
FDPS-215ENST00000490140 TYRP14679 529 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 HNRNPLP14866 589 aaKnown RBP eCLIP12.44□□□□□ -0.42
FDPS-215ENST00000490140 GABRG2P18507 467 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 PSEN1P49768 467 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 ZNF132P52740 706 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 CLDN10P78369 228 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 EHHADHQ08426 723 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 EMC10Q5UCC4 262 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 KLHDC10Q6PID8 442 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 PIP4P1Q86T03 277 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 SFTPA1Q8IWL2 248 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 MINDY1Q8N5J2 469 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 CCDC150Q8NCX0 1101 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 SCAMP5Q8TAC9 235 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 PARD3BQ8TEW8 1205 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 GATA6Q92908 595 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 ZDHHC5Q9C0B5 715 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 CAPN10Q9HC96 672 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 PNPLA8Q9NP80 782 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 CYLDQ9NQC7 956 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 TMEM74BQ9NUR3 256 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 EXOC1Q9NV70 894 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 ZNF510Q9Y2H8 683 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 MSRB2Q9Y3D2 182 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 CEP192Q8TEP8 1941 aa12.44□□□□□ -0.42
FDPS-215ENST00000490140 SPEGQ15772 3267 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 IGHV1OR15-9A0A0B4J2B8 117 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 LRRIQ3A6PVS8 624 aaPredicted RBP12.43□□□□□ -0.42
FDPS-215ENST00000490140 K7ELQ4 463 aaPredicted RBP12.43□□□□□ -0.42
FDPS-215ENST00000490140 POLR2DO15514 142 aaKnown RBP12.43□□□□□ -0.42
FDPS-215ENST00000490140 PIK3CAP42336 1068 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 ME1P48163 572 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 DGKGP49619 791 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 MESP2Q0VG99 397 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 ATL3Q6DD88 541 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 ACOT1Q86TX2 421 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 TMEM25Q86YD3 366 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 RGL4Q8IZJ4 473 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 FUKQ8N0W3 1084 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 SLC2A14Q8TDB8 520 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 IPO4Q8TEX9 1081 aaKnown RBP12.43□□□□□ -0.42
FDPS-215ENST00000490140 TMEM174Q8WUU8 243 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 UCMAQ8WVF2 138 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 HSPA12BQ96MM6 686 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 GABRG3Q99928 467 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 CSNK1G1Q9HCP0 422 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 SLC39A2Q9NP94 309 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 DNAAF2Q9NVR5 837 aaKnown RBP12.43□□□□□ -0.42
FDPS-215ENST00000490140 DNMT3LQ9UJW3 386 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 CYP8B1Q9UNU6 501 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 SCML2Q9UQR0 700 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 FRMD4BQ9Y2L6 1034 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 NFE2L3Q9Y4A8 694 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 NME7Q9Y5B8 376 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 PCDHB9Q9Y5E1 797 aa12.43□□□□□ -0.42
FDPS-215ENST00000490140 MEI4A8MW99 385 aa12.42□□□□□ -0.42
FDPS-215ENST00000490140 IKBKBO14920 756 aa12.42□□□□□ -0.42
FDPS-215ENST00000490140 HYAL3O43820 417 aaPredicted RBP12.42□□□□□ -0.42
FDPS-215ENST00000490140 MYL1P05976 194 aa12.42□□□□□ -0.42
FDPS-215ENST00000490140 HSP90AA1P07900 732 aaKnown RBP12.42□□□□□ -0.42
FDPS-215ENST00000490140 RALAP11233 206 aa12.42□□□□□ -0.42
FDPS-215ENST00000490140 CCDC130P13994 396 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms