RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 HSF5Q4G112 596 aaPredicted RBP10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 RAB41Q5JT25 222 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 LY6G5CQ5SRR4 150 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 PPP1R26Q5T8A7 1209 aaPredicted RBP10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 TTI2Q6NXR4 508 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 CCDC186Q7Z3E2 898 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 C12orf40Q86WS4 652 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 BBS7Q8IWZ6 715 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 UBR7Q8N806 425 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 RPLP0P6Q8NHW5 317 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 SMARCE1Q969G3 411 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 ACDQ96AP0 544 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 TMEM176AQ96HP8 235 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 PNKPQ96T60 521 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 ARID3AQ99856 593 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 NMUR1Q9HB89 426 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 WDR70Q9NW82 654 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 CLIC5Q9NZA1 410 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 MARK1Q9P0L2 795 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 GMEB2Q9UKD1 530 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 RAB23Q9ULC3 237 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 GOLGA6L4A6NEF3 574 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 PPP1R3GB7ZBB8 358 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 AXIN1O15169 862 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 FOXD2O60548 495 aaPredicted RBP10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 RPP40O75818 363 aaKnown RBP10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 KAT7O95251 611 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 ADH5P11766 374 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 ADORA2BP29275 332 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 ATP5C1P36542 298 aaKnown RBP10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 PPP1R2P41236 205 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 PXNP49023 591 aaPredicted RBP10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 GAD2Q05329 585 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 SPEM2Q0P670 501 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 IFRD2Q12894 506 aaPredicted RBP10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 LPAL2Q16609 132 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 RSPO4Q2I0M5 234 aaPredicted RBP10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 PLA2G2CQ5R387 149 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 PM20D1Q6GTS8 502 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 Q6ZNB5 142 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 CACNA2D4Q7Z3S7 1137 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 KBTBD6Q86V97 674 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 TMEM25Q86YD3 366 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 SFTPA1Q8IWL2 248 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 ANKRD52Q8NB46 1076 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 CCDC150Q8NCX0 1101 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 TTC16Q8NEE8 873 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 OLIG1Q8TAK6 271 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 LMO3Q8TAP4 145 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 ERCC4Q92889 916 aaPredicted RBP10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 HEXIM2Q96MH2 286 aaKnown RBP10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 CEP63Q96MT8 703 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 TSG101Q99816 390 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 HINFPQ9BQA5 517 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 DNAI2Q9GZS0 605 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 METTL14Q9HCE5 456 aaKnown RBP10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 SPHK2Q9NRA0 654 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 SEMA4GQ9NTN9 838 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 ARMCX3Q9UH62 379 aaPredicted RBP10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 HOOK1Q9UJC3 728 aaKnown RBP10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 MAN1B1Q9UKM7 699 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 HCN2Q9UL51 889 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 MMP17Q9ULZ9 603 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 STARD13Q9Y3M8 1113 aa10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 CNOT1A5YKK6 2376 aaKnown RBP10.25□□□□□ -0.77
TMEM39A-210ENST00000490099 MYO16Q9Y6X6 1858 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 TRIM49BA6NDI0 452 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 SCAMP3O14828 347 aaKnown RBP10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 CYP26A1O43174 497 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 TULP3O75386 442 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 HNRNPLP14866 589 aaKnown RBP eCLIP10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 CD58P19256 250 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 TRIM21P19474 475 aaKnown RBP10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 ACO1P21399 889 aaKnown RBP10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 PLA2G4AP47712 749 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 DGKEP52429 567 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 ATXN1P54253 815 aaKnown RBP10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 CUL2Q13617 745 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 MORC3Q14149 939 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 CRY1Q16526 586 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 PLK5Q496M5 336 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 PKDCCQ504Y2 493 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 C2orf27AQ580R0 203 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 PRR23BQ6ZRT6 265 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 BHLHA9Q7RTU4 235 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 PIGZQ86VD9 579 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 IL17RCQ8NAC3 791 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 P2RY11Q96G91 374 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 CNOT6LQ96LI5 555 aaKnown RBP10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 HHIPQ96QV1 700 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 DUSP15Q9H1R2 295 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 CD248Q9HCU0 757 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 DNMT3LQ9UJW3 386 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 FBXO10Q9UK96 956 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 KIAA1257Q9ULG3 409 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 SH3BP1Q9Y3L3 701 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 PCDHGA5Q9Y5G8 931 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms