RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 TGM5O43548 720 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 MARCH6O60337 910 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 RFPL2O75678 378 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 GLUD1P00367 558 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 URODP06132 367 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 AKAP5P24588 427 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 GLUD2P49448 558 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 NCBP1Q09161 790 aaKnown RBP7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 TFDP1Q14186 410 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 ANKRD1Q15327 319 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 NAB2Q15742 525 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 CALCRLQ16602 461 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 USP41Q3LFD5 358 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 CDCA2Q69YH5 1023 aaPredicted RBP7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 GTF2IRD2BQ6EKJ0 949 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 FUT10Q6P4F1 479 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 SLC27A1Q6PCB7 646 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 GTF2IRD2Q86UP8 949 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 NECAB1Q8N987 351 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 PIGOQ8TEQ8 1089 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 USP33Q8TEY7 942 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 GTF3C6Q969F1 213 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 COLEC11Q9BWP8 271 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 TMEM60Q9H2L4 133 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 ZDHHC7Q9NXF8 308 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 GULP1Q9UBP9 304 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 ADAM28Q9UKQ2 775 aa7.02□□□□□ -1.29
PRPF40A-210ENST00000489741 CLUHO75153 1309 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 WDR81Q562E7 1941 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 CACNA1AO00555 2505 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 GPR179Q6PRD1 2367 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 KMT2EQ8IZD2 1858 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 PTGESO14684 152 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 NARSO43776 548 aaKnown RBP7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 SUSD5O60279 629 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 NPHS1O60500 1241 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 MED24O75448 989 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 SPATA31D3P0C874 917 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 LAMP2P13473 410 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 PLS3P13797 630 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 NCKAP1LP55160 1127 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 ST3GAL1Q11201 340 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 GRIK3Q13003 919 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 TUSC3Q13454 348 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 FBLN7Q53RD9 439 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 TCERG1LQ5VWI1 586 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 CD300LGQ6UXG3 332 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 SPATA31D4Q6ZUB0 917 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 CDR2LQ86X02 465 aaPredicted RBP7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 CATSPER3Q86XQ3 398 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 TMEM151BQ8IW70 566 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 DIS3L2Q8IYB7 885 aaKnown RBP7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 CCDC105Q8IYK2 499 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 LNX1Q8TBB1 728 aaPredicted RBP7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 RSAD2Q8WXG1 361 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 SMG7Q92540 1137 aaKnown RBP7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 STAMQ92783 540 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 B3GALT6Q96L58 329 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 RTP3Q9BQQ7 232 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 CLSTN3Q9BQT9 956 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 PAAF1Q9BRP4 392 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 POLR3CQ9BUI4 534 aaPredicted RBP7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 POLR3FQ9H1D9 316 aaPredicted RBP7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 CXCL16Q9H2A7 254 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 TUFT1Q9NNX1 390 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 GPRC5CQ9NQ84 441 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 DLGAP2Q9P1A6 1054 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 DMXL1Q9Y485 3027 aa7.01□□□□□ -1.29
PRPF40A-210ENST00000489741 ZC3H12DA2A288 527 aaKnown RBP7□□□□□ -1.29
PRPF40A-210ENST00000489741 ACKR2O00590 384 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 NEMFO60524 1076 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 JAK2O60674 1132 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 TADA2AO75478 443 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 NPTXRO95502 500 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 EDN1P05305 212 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 ITGAVP06756 1048 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 POU2F2P09086 479 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 RPL17P18621 184 aaKnown RBP7□□□□□ -1.29
PRPF40A-210ENST00000489741 CYP11B2P19099 503 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 MUTP22033 750 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 IGFBP6P24592 240 aaPredicted RBP7□□□□□ -1.29
PRPF40A-210ENST00000489741 RPA1P27694 616 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 HOXA9P31269 272 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 HSP90AA2PQ14568 343 aaPredicted RBP7□□□□□ -1.29
PRPF40A-210ENST00000489741 FRMD5Q7Z6J6 570 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 ZNF227Q86WZ6 799 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 PALB2Q86YC2 1186 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 IGDCC3Q8IVU1 814 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 HACE1Q8IYU2 909 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 C4orf32Q8N8J7 132 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 MCPH1Q8NEM0 835 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 BTN2A2Q8WVV5 523 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 RIN2Q8WYP3 895 aaPredicted RBP7□□□□□ -1.29
PRPF40A-210ENST00000489741 RABGGTAQ92696 567 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 SNX27Q96L92 541 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 MRGPRX3Q96LB0 322 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 APOL6Q9BWW8 343 aa7□□□□□ -1.29
PRPF40A-210ENST00000489741 TRIM6Q9C030 488 aaPredicted RBP7□□□□□ -1.29
PRPF40A-210ENST00000489741 CCDC113Q9H0I3 377 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms