RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 DRD1P21728 446 aa22.25■■□□□ 1.15
LIME1-207ENST00000489212 ERCC5P28715 1186 aaPredicted RBP22.25■■□□□ 1.15
LIME1-207ENST00000489212 PSEN1P49768 467 aa22.25■■□□□ 1.15
LIME1-207ENST00000489212 APBA1Q02410 837 aa22.25■■□□□ 1.15
LIME1-207ENST00000489212 TPD52L1Q16890 204 aaPredicted RBP22.25■■□□□ 1.15
LIME1-207ENST00000489212 C10orf120Q5SQS8 335 aa22.25■■□□□ 1.15
LIME1-207ENST00000489212 GJB7Q6PEY0 223 aa22.25■■□□□ 1.15
LIME1-207ENST00000489212 TRIM65Q6PJ69 517 aa22.25■■□□□ 1.15
LIME1-207ENST00000489212 ZNF276Q8N554 614 aa22.25■■□□□ 1.15
LIME1-207ENST00000489212 ULBP1Q9BZM6 244 aa22.25■■□□□ 1.15
LIME1-207ENST00000489212 UBE2TQ9NPD8 197 aaPredicted RBP22.25■■□□□ 1.15
LIME1-207ENST00000489212 CLIC5Q9NZA1 410 aa22.25■■□□□ 1.15
LIME1-207ENST00000489212 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.25■■□□□ 1.15
LIME1-207ENST00000489212 CNTN6Q9UQ52 1028 aa22.25■■□□□ 1.15
LIME1-207ENST00000489212 K7ESF4 209 aa22.24■■□□□ 1.15
LIME1-207ENST00000489212 RNF40O75150 1001 aa22.24■■□□□ 1.15
LIME1-207ENST00000489212 GABBR2O75899 941 aa22.24■■□□□ 1.15
LIME1-207ENST00000489212 PAPSS2O95340 614 aaPredicted RBP22.24■■□□□ 1.15
LIME1-207ENST00000489212 MTIF2P46199 727 aaKnown RBP22.24■■□□□ 1.15
LIME1-207ENST00000489212 PLA2G4AP47712 749 aa22.24■■□□□ 1.15
LIME1-207ENST00000489212 CNGA2Q16280 664 aa22.24■■□□□ 1.15
LIME1-207ENST00000489212 LY6G5CQ5SRR4 150 aa22.24■■□□□ 1.15
LIME1-207ENST00000489212 PM20D1Q6GTS8 502 aa22.24■■□□□ 1.15
LIME1-207ENST00000489212 RBM43Q6ZSC3 357 aaKnown RBP22.24■■□□□ 1.15
LIME1-207ENST00000489212 C12orf40Q86WS4 652 aa22.24■■□□□ 1.15
LIME1-207ENST00000489212 OTUB2Q96DC9 234 aa22.24■■□□□ 1.15
LIME1-207ENST00000489212 POLR3BQ9NW08 1133 aaPredicted RBP22.24■■□□□ 1.15
LIME1-207ENST00000489212 DNMT3LQ9UJW3 386 aa22.24■■□□□ 1.15
LIME1-207ENST00000489212 PCDHGA2Q9Y5H1 932 aa22.24■■□□□ 1.15
LIME1-207ENST00000489212 ZNF292O60281 2723 aa22.24■■□□□ 1.15
LIME1-207ENST00000489212 KIAA1549LQ6ZVL6 1849 aa22.23■■□□□ 1.15
LIME1-207ENST00000489212 ANTXRLA6NF34 631 aa22.23■■□□□ 1.15
LIME1-207ENST00000489212 LILRB5O75023 590 aa22.23■■□□□ 1.15
LIME1-207ENST00000489212 ZBED1O96006 694 aa22.23■■□□□ 1.15
LIME1-207ENST00000489212 SETSIPP0DME0 302 aa22.23■■□□□ 1.15
LIME1-207ENST00000489212 RALAP11233 206 aa22.23■■□□□ 1.15
LIME1-207ENST00000489212 SLC6A11P48066 632 aa22.23■■□□□ 1.15
LIME1-207ENST00000489212 DMWDQ09019 674 aa22.23■■□□□ 1.15
LIME1-207ENST00000489212 ADIGQ0VDE8 80 aa22.23■■□□□ 1.15
LIME1-207ENST00000489212 MESP2Q0VG99 397 aa22.23■■□□□ 1.15
LIME1-207ENST00000489212 HSP90AA4PQ58FG1 418 aa22.23■■□□□ 1.15
LIME1-207ENST00000489212 HTR3DQ70Z44 454 aa22.23■■□□□ 1.15
LIME1-207ENST00000489212 ATRIPQ8WXE1 791 aa22.23■■□□□ 1.15
LIME1-207ENST00000489212 FAM126AQ9BYI3 521 aaPredicted RBP22.23■■□□□ 1.15
LIME1-207ENST00000489212 SEMA4AQ9H3S1 761 aa22.23■■□□□ 1.15
LIME1-207ENST00000489212 LRRC4Q9HBW1 653 aa22.23■■□□□ 1.15
LIME1-207ENST00000489212 DACH1Q9UI36 760 aa22.23■■□□□ 1.15
LIME1-207ENST00000489212 M0QYV0 167 aa22.22■■□□□ 1.15
LIME1-207ENST00000489212 ADH1CP00326 375 aa22.22■■□□□ 1.15
LIME1-207ENST00000489212 LMNAP02545 664 aaKnown RBP22.22■■□□□ 1.15
LIME1-207ENST00000489212 ADH5P11766 374 aa22.22■■□□□ 1.15
LIME1-207ENST00000489212 YWHAGP61981 247 aaKnown RBP eCLIP22.22■■□□□ 1.15
LIME1-207ENST00000489212 PPP2R5DQ14738 602 aa22.22■■□□□ 1.15
LIME1-207ENST00000489212 PMF1Q6P1K2 205 aa22.22■■□□□ 1.15
LIME1-207ENST00000489212 GBP6Q6ZN66 633 aa22.22■■□□□ 1.15
LIME1-207ENST00000489212 MIB1Q86YT6 1006 aa22.22■■□□□ 1.15
LIME1-207ENST00000489212 SFTPA1Q8IWL2 248 aa22.22■■□□□ 1.15
LIME1-207ENST00000489212 SLC35F5Q8WV83 523 aa22.22■■□□□ 1.15
LIME1-207ENST00000489212 KCTD13Q8WZ19 329 aa22.22■■□□□ 1.15
LIME1-207ENST00000489212 SECISBP2LQ93073 1101 aaKnown RBP22.22■■□□□ 1.15
LIME1-207ENST00000489212 EXOC4Q96A65 974 aa22.22■■□□□ 1.15
LIME1-207ENST00000489212 GTPBP10A4D1E9 387 aaKnown RBP22.21■■□□□ 1.15
LIME1-207ENST00000489212 CHURC1-FNTBB4DL54 471 aa22.21■■□□□ 1.15
LIME1-207ENST00000489212 KRT5P13647 590 aa22.21■■□□□ 1.15
LIME1-207ENST00000489212 PON1P27169 355 aa22.21■■□□□ 1.15
LIME1-207ENST00000489212 RGS7P49802 495 aa22.21■■□□□ 1.15
LIME1-207ENST00000489212 EFEMP1Q12805 493 aa22.21■■□□□ 1.15
LIME1-207ENST00000489212 MAN2A1Q16706 1144 aa22.21■■□□□ 1.15
LIME1-207ENST00000489212 EXOC3L4Q17RC7 722 aa22.21■■□□□ 1.15
LIME1-207ENST00000489212 FBXO43Q4G163 708 aa22.21■■□□□ 1.15
LIME1-207ENST00000489212 MIIPQ5JXC2 388 aa22.21■■□□□ 1.15
LIME1-207ENST00000489212 TADA2BQ86TJ2 420 aa22.21■■□□□ 1.15
LIME1-207ENST00000489212 TMEM25Q86YD3 366 aa22.21■■□□□ 1.15
LIME1-207ENST00000489212 ARHGAP18Q8N392 663 aa22.21■■□□□ 1.15
LIME1-207ENST00000489212 SUMF1Q8NBK3 374 aa22.21■■□□□ 1.15
LIME1-207ENST00000489212 ACP6Q9NPH0 428 aa22.21■■□□□ 1.15
LIME1-207ENST00000489212 SAMSN1Q9NSI8 373 aaKnown RBP22.21■■□□□ 1.15
LIME1-207ENST00000489212 RASAL2Q9UJF2 1139 aa22.21■■□□□ 1.15
LIME1-207ENST00000489212 K7EQS6 105 aa22.2■■□□□ 1.14
LIME1-207ENST00000489212 STC2O76061 302 aa22.2■■□□□ 1.14
LIME1-207ENST00000489212 LCP1P13796 627 aa22.2■■□□□ 1.14
LIME1-207ENST00000489212 NRLP54845 237 aa22.2■■□□□ 1.14
LIME1-207ENST00000489212 GOLGA8FQ08AF8 430 aa22.2■■□□□ 1.14
LIME1-207ENST00000489212 GOLGA8DPQ0D2H9 430 aa22.2■■□□□ 1.14
LIME1-207ENST00000489212 STILQ15468 1287 aa22.2■■□□□ 1.14
LIME1-207ENST00000489212 CT47A1Q5JQC4 288 aaPredicted RBP22.2■■□□□ 1.14
LIME1-207ENST00000489212 Q6ZNB5 142 aa22.2■■□□□ 1.14
LIME1-207ENST00000489212 FAM114A1Q8IWE2 563 aa22.2■■□□□ 1.14
LIME1-207ENST00000489212 RPLP0P6Q8NHW5 317 aa22.2■■□□□ 1.14
LIME1-207ENST00000489212 CDK5RAP1Q96SZ6 601 aaKnown RBP22.2■■□□□ 1.14
LIME1-207ENST00000489212 SIX2Q9NPC8 291 aa22.2■■□□□ 1.14
LIME1-207ENST00000489212 SPHK2Q9NRA0 654 aa22.2■■□□□ 1.14
LIME1-207ENST00000489212 APEX2Q9UBZ4 518 aa22.2■■□□□ 1.14
LIME1-207ENST00000489212 AJAP1Q9UKB5 411 aaPredicted RBP22.2■■□□□ 1.14
LIME1-207ENST00000489212 YJEFN3A6XGL0 299 aa22.19■■□□□ 1.14
LIME1-207ENST00000489212 BECN2A8MW95 431 aa22.19■■□□□ 1.14
LIME1-207ENST00000489212 E7ENQ6 273 aa22.19■■□□□ 1.14
LIME1-207ENST00000489212 GOLGA6L22H0YM25 854 aa22.19■■□□□ 1.14
LIME1-207ENST00000489212 PIK3R2O00459 728 aa22.19■■□□□ 1.14
LIME1-207ENST00000489212 HOXC11O43248 304 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms