RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 LMNB2Q03252 620 aa13.22□□□□□ -0.29
SRRM1-216ENST00000489130 GAD2Q05329 585 aa13.22□□□□□ -0.29
SRRM1-216ENST00000489130 GOLGA8FQ08AF8 430 aa13.22□□□□□ -0.29
SRRM1-216ENST00000489130 GOLGA8DPQ0D2H9 430 aa13.22□□□□□ -0.29
SRRM1-216ENST00000489130 MORC3Q14149 939 aa13.22□□□□□ -0.29
SRRM1-216ENST00000489130 CEP68Q76N32 757 aa13.22□□□□□ -0.29
SRRM1-216ENST00000489130 SCD5Q86SK9 330 aa13.22□□□□□ -0.29
SRRM1-216ENST00000489130 SFTPA1Q8IWL2 248 aa13.22□□□□□ -0.29
SRRM1-216ENST00000489130 ETFBKMTQ8IXQ9 262 aa13.22□□□□□ -0.29
SRRM1-216ENST00000489130 FAM160A2Q8N612 972 aaPredicted RBP13.22□□□□□ -0.29
SRRM1-216ENST00000489130 UBR7Q8N806 425 aa13.22□□□□□ -0.29
SRRM1-216ENST00000489130 ANKRD52Q8NB46 1076 aa13.22□□□□□ -0.29
SRRM1-216ENST00000489130 CDK5RAP1Q96SZ6 601 aaKnown RBP13.22□□□□□ -0.29
SRRM1-216ENST00000489130 SPHK2Q9NRA0 654 aa13.22□□□□□ -0.29
SRRM1-216ENST00000489130 CLIC5Q9NZA1 410 aa13.22□□□□□ -0.29
SRRM1-216ENST00000489130 DNMT3LQ9UJW3 386 aa13.22□□□□□ -0.29
SRRM1-216ENST00000489130 USP18Q9UMW8 372 aa13.22□□□□□ -0.29
SRRM1-216ENST00000489130 MYO16Q9Y6X6 1858 aa13.22□□□□□ -0.29
SRRM1-216ENST00000489130 SPTBN4Q9H254 2564 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 BICDL2A1A5D9 508 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 ANTXRLA6NF34 631 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 PRR5-ARHGAP8B1AHC4 643 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 APODP05090 189 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 CCDC192P0DO97 292 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 TBXAS1P24557 533 aaPredicted RBP13.21□□□□□ -0.29
SRRM1-216ENST00000489130 TNFRSF4P43489 277 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 SEC13P55735 322 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 SLC8A3P57103 927 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 YWHAEP62258 255 aaKnown RBP13.21□□□□□ -0.29
SRRM1-216ENST00000489130 ARHGAP8P85298 464 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 SPEM2Q0P670 501 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 PUM1Q14671 1186 aaKnown RBP eCLIP13.21□□□□□ -0.299e-11■■□□□ 14.2
SRRM1-216ENST00000489130 HSF5Q4G112 596 aaPredicted RBP13.21□□□□□ -0.29
SRRM1-216ENST00000489130 C2orf27AQ580R0 203 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 RAB41Q5JT25 222 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 BTBD8Q5XKL5 378 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 KLHL10Q6JEL2 608 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 CACNA2D4Q7Z3S7 1137 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 TADA2BQ86TJ2 420 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 PIGZQ86VD9 579 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 TTC30AQ86WT1 665 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 TMEM25Q86YD3 366 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 TSTD1Q8NFU3 115 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 NELFBQ8WX92 580 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 LOXL4Q96JB6 756 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 ZC3H10Q96K80 434 aaKnown RBP13.21□□□□□ -0.29
SRRM1-216ENST00000489130 ARHGEF4Q9NR80 690 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 NAGPAQ9UK23 515 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 MMP17Q9ULZ9 603 aa13.21□□□□□ -0.29
SRRM1-216ENST00000489130 MDM4O15151 490 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 P4HA2O15460 535 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 TULP3O75386 442 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 RALAP11233 206 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 SDHBP21912 280 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 KIR2DL1P43626 348 aaPredicted RBP13.2□□□□□ -0.3
SRRM1-216ENST00000489130 PLA2G4AP47712 749 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 DGKEP52429 567 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 BCAT1P54687 386 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 KDSRQ06136 332 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 CRY1Q16526 586 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 CSRP2Q16527 193 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 RSPO4Q2I0M5 234 aaPredicted RBP13.2□□□□□ -0.3
SRRM1-216ENST00000489130 GOLGA7BQ2TAP0 167 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 ANO4Q32M45 955 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 CCDC40Q4G0X9 1142 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 PREPLQ4J6C6 727 aaPredicted RBP13.2□□□□□ -0.3
SRRM1-216ENST00000489130 SGO2Q562F6 1265 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 C10orf120Q5SQS8 335 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 Q6ZNB5 142 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 KBTBD6Q86V97 674 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 RASSF3Q86WH2 238 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 IL17RCQ8NAC3 791 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 SEMA4GQ9NTN9 838 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 MARK1Q9P0L2 795 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 LSM7Q9UK45 103 aaKnown RBP13.2□□□□□ -0.3
SRRM1-216ENST00000489130 NUDT5Q9UKK9 219 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 TSPAN16Q9UKR8 245 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 CTNND2Q9UQB3 1225 aa13.2□□□□□ -0.3
SRRM1-216ENST00000489130 O00370 1275 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 BIN1O00499 593 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 XPO1O14980 1071 aaKnown RBP13.19□□□□□ -0.3
SRRM1-216ENST00000489130 CACNG3O60359 315 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 STC2O76061 302 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 GNA14O95837 355 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 MARSP56192 900 aaKnown RBP13.19□□□□□ -0.3
SRRM1-216ENST00000489130 PDE4CQ08493 712 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 LRMPQ12912 555 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 PAK1Q13153 545 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 PM20D1Q6GTS8 502 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 PRR23CQ6ZRP0 262 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 TRIM59Q8IWR1 403 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 ARHGAP18Q8N392 663 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 CCDC33Q8N5R6 958 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 ALLCQ8N6M5 410 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 NAT16Q8N8M0 369 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 TRIML1Q8N9V2 468 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 TERB1Q8NA31 727 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 LMO3Q8TAP4 145 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 KCNV2Q8TDN2 545 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 CNOT6LQ96LI5 555 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms