RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 FAM3CQ92520 227 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 SPAG5Q96R06 1193 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 ERGIC2Q96RQ1 377 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 DDX23Q9BUQ8 820 aaKnown RBP15.81■□□□□ 0.12
CXCL12-207ENST00000488591 GANQ9H2C0 597 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 PDCL3Q9H2J4 239 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 EBF3Q9H4W6 596 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 OSER1Q9NX31 292 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 TBC1D14Q9P2M4 693 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 SIK3Q9Y2K2 1263 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 HCN4Q9Y3Q4 1203 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 CEP83Q9Y592 693 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 FAM170BA6NMN3 283 aa15.8■□□□□ 0.12
CXCL12-207ENST00000488591 TBX18O95935 607 aa15.8■□□□□ 0.12
CXCL12-207ENST00000488591 KLK7P49862 253 aa15.8■□□□□ 0.12
CXCL12-207ENST00000488591 NUBP1P53384 320 aa15.8■□□□□ 0.12
CXCL12-207ENST00000488591 SNX16P57768 344 aa15.8■□□□□ 0.12
CXCL12-207ENST00000488591 ZXDBP98169 803 aa15.8■□□□□ 0.12
CXCL12-207ENST00000488591 TNK2Q07912 1038 aa15.8■□□□□ 0.12
CXCL12-207ENST00000488591 CWF19L1Q69YN2 538 aaKnown RBP15.8■□□□□ 0.12
CXCL12-207ENST00000488591 TRIM68Q6AZZ1 485 aa15.8■□□□□ 0.12
CXCL12-207ENST00000488591 LUZP1Q86V48 1076 aa15.8■□□□□ 0.12
CXCL12-207ENST00000488591 SLC47A2Q86VL8 602 aa15.8■□□□□ 0.12
CXCL12-207ENST00000488591 RIN3Q8TB24 985 aa15.8■□□□□ 0.12
CXCL12-207ENST00000488591 RNF139Q8WU17 664 aa15.8■□□□□ 0.12
CXCL12-207ENST00000488591 IRGQQ8WZA9 623 aa15.8■□□□□ 0.12
CXCL12-207ENST00000488591 EXOC4Q96A65 974 aa15.8■□□□□ 0.12
CXCL12-207ENST00000488591 NOX5Q96PH1 765 aa15.8■□□□□ 0.12
CXCL12-207ENST00000488591 OSBPL6Q9BZF3 934 aa15.8■□□□□ 0.12
CXCL12-207ENST00000488591 RTN4Q9NQC3 1192 aaKnown RBP15.8■□□□□ 0.12
CXCL12-207ENST00000488591 OLA1Q9NTK5 396 aaKnown RBP15.8■□□□□ 0.12
CXCL12-207ENST00000488591 LSM7Q9UK45 103 aaKnown RBP15.8■□□□□ 0.12
CXCL12-207ENST00000488591 STRIP2Q9ULQ0 834 aa15.8■□□□□ 0.12
CXCL12-207ENST00000488591 PCDHGC3Q9UN70 934 aa15.8■□□□□ 0.12
CXCL12-207ENST00000488591 WNT6Q9Y6F9 365 aa15.8■□□□□ 0.12
CXCL12-207ENST00000488591 F8VZ95 297 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 SPECC1L-ADORA2AF8WAN1 911 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 PIK3R2O00459 728 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 SART1O43290 800 aaKnown RBP15.79■□□□□ 0.12
CXCL12-207ENST00000488591 NFATC1O95644 943 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 PNMA6AP0CW24 399 aaPredicted RBP15.79■□□□□ 0.12
CXCL12-207ENST00000488591 CYP11B1P15538 503 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 CD72P21854 359 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 STAT1P42224 750 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 VCPP55072 806 aaKnown RBP15.79■□□□□ 0.12
CXCL12-207ENST00000488591 DAOAP59103 153 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 COG7P83436 770 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 BSPRYQ5W0U4 402 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 MIB1Q86YT6 1006 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 PJA1Q8NG27 643 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 NDRG1Q92597 394 aaKnown RBP15.79■□□□□ 0.12
CXCL12-207ENST00000488591 PRRX2Q99811 253 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 KLF16Q9BXK1 252 aaPredicted RBP15.79■□□□□ 0.12
CXCL12-207ENST00000488591 FOXQ1Q9C009 403 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 MIS12Q9H081 205 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 LHX5Q9H2C1 402 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 ECT2Q9H8V3 914 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 LTB4R2Q9NPC1 389 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 NLRC4Q9NPP4 1024 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 HPS4Q9NQG7 708 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 ABCC13Q9NSE7 274 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 RASAL2Q9UJF2 1139 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 NUDT5Q9UKK9 219 aa15.79■□□□□ 0.12
CXCL12-207ENST00000488591 YJEFN3A6XGL0 299 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 E7ENQ6 273 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 PI15O43692 258 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 IRF1P10914 325 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 ARSAP15289 507 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 COL9A1P20849 921 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 CTHP32929 405 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 SOX5P35711 763 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 RPL34P49207 117 aaKnown RBP15.78■□□□□ 0.12
CXCL12-207ENST00000488591 EFEMP1Q12805 493 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 EML3Q32P44 896 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 CACNA2D4Q7Z3S7 1137 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 PASD1Q8IV76 773 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 SCUBE3Q8IX30 993 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 TMEM105Q8N8V8 129 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 OTUB2Q96DC9 234 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 ZFRQ96KR1 1074 aaKnown RBP15.78■□□□□ 0.12
CXCL12-207ENST00000488591 TRIM62Q9BVG3 475 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 SLC4A5Q9BY07 1137 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 KCNH6Q9H252 994 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 LINC00597Q9H2U6 94 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 TSPY26PQ9H489 355 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 MARCH2Q9P0N8 246 aa15.78■□□□□ 0.12
CXCL12-207ENST00000488591 NDRG2Q9UN36 371 aaKnown RBP15.78■□□□□ 0.12
CXCL12-207ENST00000488591 KIF26AQ9ULI4 1882 aaPredicted RBP15.78■□□□□ 0.12
CXCL12-207ENST00000488591 COL4A2P08572 1712 aa15.77■□□□□ 0.12
CXCL12-207ENST00000488591 MDM4O15151 490 aa15.77■□□□□ 0.12
CXCL12-207ENST00000488591 EPHB6O15197 1021 aa15.77■□□□□ 0.12
CXCL12-207ENST00000488591 GABBR2O75899 941 aa15.77■□□□□ 0.12
CXCL12-207ENST00000488591 GFPT2O94808 682 aa15.77■□□□□ 0.12
CXCL12-207ENST00000488591 LTFP02788 710 aa15.77■□□□□ 0.12
CXCL12-207ENST00000488591 MAGEA9P43362 315 aa15.77■□□□□ 0.12
CXCL12-207ENST00000488591 SOX9P48436 509 aa15.77■□□□□ 0.12
CXCL12-207ENST00000488591 PDCLQ13371 301 aa15.77■□□□□ 0.12
CXCL12-207ENST00000488591 HTR3DQ70Z44 454 aa15.77■□□□□ 0.12
CXCL12-207ENST00000488591 BHLHA9Q7RTU4 235 aa15.77■□□□□ 0.12
CXCL12-207ENST00000488591 TMEM110Q86TL2 294 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms