RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 WIPI1Q5MNZ9 446 aaPredicted RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 ZFYVE27Q5T4F4 411 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 FAM171A1Q5VUB5 890 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 TDRD10Q5VZ19 366 aaKnown RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 FAM171BQ6P995 826 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 KIAA0907Q7Z7F0 614 aaPredicted RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 C12orf40Q86WS4 652 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 PROSER1Q86XN7 944 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 ARHGAP18Q8N392 663 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 VWA5B2Q8N398 1253 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 CPXM2Q8N436 756 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 ASB12Q8WXK4 309 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 ZCCHC14Q8WYQ9 949 aaKnown RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 TMEM159Q96B96 161 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 ERLEC1Q96DZ1 483 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 PLPPR2Q96GM1 343 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 ZNF419Q96HQ0 510 aaPredicted RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 EDEM2Q9BV94 578 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 STRA6Q9BX79 667 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 DCLK3Q9C098 648 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 BHLHE41Q9C0J9 482 aaPredicted RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 CDT1Q9H211 546 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 CPVLQ9H3G5 476 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 ZDHHC4Q9NPG8 344 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 KLF15Q9UIH9 416 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 TUBD1Q9UJT1 453 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 CDH9Q9ULB4 789 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 PCDHB6Q9Y5E3 794 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 PCDHA5Q9Y5H7 936 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 CYP46A1Q9Y6A2 500 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 R4GN57 208 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 ITIH6Q6UXX5 1313 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 TRANK1O15050 2925 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 ADAMTS20P59510 1910 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 A0A1B0GTW7 788 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 CLEC18AA5D8T8 446 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 ARHGEF35A5YM69 484 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 SRRM3A6NNA2 597 aaPredicted RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 LINC01387J3KSC0 135 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 ALOX15BO15296 676 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 FAM189A1O60320 539 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 OPHN1O60890 802 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 CILPO75339 1184 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 NFICP08651 508 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 ZDHHC11BP0C7U3 371 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 SPATA31C1P0DKV0 1188 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 GNSP15586 552 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 CD82P27701 267 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 GDI1P31150 447 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 L1CAMP32004 1257 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 RXRGP48443 463 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 GIPRP48546 466 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 GTF2BQ00403 316 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 MYL7Q01449 175 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 YWHAHQ04917 246 aaPredicted RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 GAD2Q05329 585 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 KCNMA1Q12791 1236 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 STRN3Q13033 797 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 SAFBQ15424 915 aaKnown RBP eCLIP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 SMAD1Q15797 465 aaKnown RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 CTXN3Q4LDR2 81 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 SYCP2LQ5T4T6 812 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 TANGO2Q6ICL3 276 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 PSAPL1Q6NUJ1 521 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 FIGNL1Q6PIW4 674 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 CLEC18BQ6UXF7 455 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 EP400NLQ6ZTU2 488 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 STXBP4Q6ZWJ1 553 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 USP30Q70CQ3 517 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 HPS6Q86YV9 775 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 DCP2Q8IU60 420 aaKnown RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 CMTM8Q8IZV2 173 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 LRRC71Q8N4P6 559 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 SYT2Q8N9I0 419 aaPredicted RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 TMEM102Q8N9M5 508 aaPredicted RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 CLEC18CQ8NCF0 446 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 ITFG1Q8TB96 612 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 ZSCAN18Q8TBC5 510 aaPredicted RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 GPBAR1Q8TDU6 330 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 BSNDQ8WZ55 320 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 MRPS31Q92665 395 aaKnown RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 SKA1Q96BD8 255 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 CCDC43Q96MW1 224 aaKnown RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 TRIM62Q9BVG3 475 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 EIF2AQ9BY44 585 aaKnown RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 CEP44Q9C0F1 390 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 MIOSQ9NXC5 875 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 SIRPGQ9P1W8 387 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 STOML2Q9UJZ1 356 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 PCDHA12Q9UN75 941 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 SAMM50Q9Y512 469 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 SNX14Q9Y5W7 946 aa2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 DDX49Q9Y6V7 483 aaKnown RBP2.92□□□□□ -1.94
DEPDC1-203ENST00000488146 A0A0B4J269 797 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 FRMD3A2A2Y4 597 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 PRRG1O14668 218 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 EIF3DO15371 548 aaKnown RBP eCLIP2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 ASLP04424 464 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 TP53P04637 393 aaPredicted RBP2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 APODP05090 189 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms