RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 PTF1AQ7RTS3 328 aa4.79□□□□□ -1.64
TTC3-220ENST00000487711 CCDC28AQ8IWP9 274 aa4.79□□□□□ -1.64
TTC3-220ENST00000487711 DEPTORQ8TB45 409 aa4.79□□□□□ -1.64
TTC3-220ENST00000487711 ABHD5Q8WTS1 349 aa4.79□□□□□ -1.64
TTC3-220ENST00000487711 GJA10Q969M2 543 aa4.79□□□□□ -1.64
TTC3-220ENST00000487711 KIAA1191Q96A73 305 aa4.79□□□□□ -1.64
TTC3-220ENST00000487711 CTHRC1Q96CG8 243 aa4.79□□□□□ -1.64
TTC3-220ENST00000487711 SGCZQ96LD1 299 aa4.79□□□□□ -1.64
TTC3-220ENST00000487711 SNX18Q96RF0 628 aa4.79□□□□□ -1.64
TTC3-220ENST00000487711 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.79□□□□□ -1.642e-6■□□□□ 9.9
TTC3-220ENST00000487711 PCDHAC1Q9H158 963 aa4.79□□□□□ -1.64
TTC3-220ENST00000487711 NLRC4Q9NPP4 1024 aa4.79□□□□□ -1.64
TTC3-220ENST00000487711 CHST12Q9NRB3 414 aa4.79□□□□□ -1.64
TTC3-220ENST00000487711 FNIP2Q9P278 1114 aa4.79□□□□□ -1.64
TTC3-220ENST00000487711 ZMYND8Q9ULU4 1186 aaPredicted RBP4.79□□□□□ -1.64
TTC3-220ENST00000487711 PCDHGB2Q9Y5G2 931 aa4.79□□□□□ -1.64
TTC3-220ENST00000487711 FAM234BA2RU67 622 aa4.78□□□□□ -1.64
TTC3-220ENST00000487711 A8MVJ9 347 aa4.78□□□□□ -1.64
TTC3-220ENST00000487711 H7C1Q1 480 aa4.78□□□□□ -1.64
TTC3-220ENST00000487711 KCNQ3O43525 872 aa4.78□□□□□ -1.64
TTC3-220ENST00000487711 GCATO75600 419 aa4.78□□□□□ -1.64
TTC3-220ENST00000487711 PRKCGP05129 697 aa4.78□□□□□ -1.64
TTC3-220ENST00000487711 MST1P26927 711 aa4.78□□□□□ -1.64
TTC3-220ENST00000487711 GABRB3P28472 473 aa4.78□□□□□ -1.64
TTC3-220ENST00000487711 HSPA7P48741 367 aa4.78□□□□□ -1.64
TTC3-220ENST00000487711 RENBPP51606 427 aa4.78□□□□□ -1.64
TTC3-220ENST00000487711 GRM1Q13255 1194 aa4.78□□□□□ -1.64
TTC3-220ENST00000487711 ABLIM2Q6H8Q1 611 aa4.78□□□□□ -1.64
TTC3-220ENST00000487711 KIAA0408Q6ZU52 694 aa4.78□□□□□ -1.64
TTC3-220ENST00000487711 P3H2Q8IVL5 708 aa4.78□□□□□ -1.64
TTC3-220ENST00000487711 PNLDC1Q8NA58 520 aaKnown RBP4.78□□□□□ -1.64
TTC3-220ENST00000487711 GRAMD1AQ96CP6 724 aa4.78□□□□□ -1.64
TTC3-220ENST00000487711 RGL1Q9NZL6 768 aa4.78□□□□□ -1.64
TTC3-220ENST00000487711 COL15A1P39059 1388 aa4.78□□□□□ -1.64
TTC3-220ENST00000487711 LINC01548A6NM66 108 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 UBE2Q2LH0YL09 131 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 PODXLO00592 558 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 RBMXL2O75526 392 aaKnown RBP4.77□□□□□ -1.65
TTC3-220ENST00000487711 WDR47O94967 919 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 NHLRC4P0CG21 123 aaPredicted RBP4.77□□□□□ -1.65
TTC3-220ENST00000487711 ARP10275 920 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 EGR1P18146 543 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 ABCB4P21439 1286 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 ADRA1DP25100 572 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 MCM5P33992 734 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 HTR7P34969 479 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 DEUP1Q05D60 604 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 BTKQ06187 659 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 PROSER3Q2NL68 480 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 ARHGAP15Q53QZ3 475 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 RAP1GAP2Q684P5 730 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 BCDIN3DQ7Z5W3 292 aaKnown RBP4.77□□□□□ -1.65
TTC3-220ENST00000487711 KRT73Q86Y46 540 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 GLIS1Q8NBF1 620 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 SEMA6DQ8NFY4 1073 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 SUN3Q8TAQ9 357 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 NTN5Q8WTR8 489 aaPredicted RBP4.77□□□□□ -1.65
TTC3-220ENST00000487711 HS6ST2Q96MM7 605 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 ZNF700Q9H0M5 742 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 ASAP1Q9ULH1 1129 aa4.77□□□□□ -1.65
TTC3-220ENST00000487711 TISP43B9A030 160 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 POC1B-GALNT4F8VUJ3 575 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 HNRNPDLO14979 420 aaKnown RBP4.76□□□□□ -1.65
TTC3-220ENST00000487711 ZSCAN9O15535 394 aaPredicted RBP4.76□□□□□ -1.65
TTC3-220ENST00000487711 PECAM1P16284 738 aaPredicted RBP4.76□□□□□ -1.65
TTC3-220ENST00000487711 ZNF37AP17032 561 aaPredicted RBP4.76□□□□□ -1.65
TTC3-220ENST00000487711 SLC5A2P31639 672 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 C21orf58P58505 322 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 TUBA4AP68366 448 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 MRPS21P82921 87 aaKnown RBP4.76□□□□□ -1.65
TTC3-220ENST00000487711 TXNL4AP83876 142 aaKnown RBP4.76□□□□□ -1.65
TTC3-220ENST00000487711 TFF2Q03403 129 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 SLC10A2Q12908 348 aaPredicted RBP4.76□□□□□ -1.65
TTC3-220ENST00000487711 UBE4AQ14139 1066 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 BRD3Q15059 726 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 MAPKAPK3Q16644 382 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 MPEG1Q2M385 716 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 SLC5A9Q2M3M2 681 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 CERKLQ49MI3 558 aaPredicted RBP4.76□□□□□ -1.65
TTC3-220ENST00000487711 DGKKQ5KSL6 1271 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 XRRA1Q6P2D8 792 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 TMEM65Q6PI78 240 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 ZNF782Q6ZMW2 699 aaPredicted RBP4.76□□□□□ -1.65
TTC3-220ENST00000487711 CHSY1Q86X52 802 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 GALNT4Q8N4A0 578 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 PNPLA1Q8N8W4 532 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 FAM71DQ8N9W8 422 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 MAFAQ8NHW3 353 aaPredicted RBP4.76□□□□□ -1.65
TTC3-220ENST00000487711 CCDC17Q96LX7 622 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 FYTTD1Q96QD9 318 aaKnown RBP4.76□□□□□ -1.65
TTC3-220ENST00000487711 USP29Q9HBJ7 922 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 ARFGAP3Q9NP61 516 aa4.76□□□□□ -1.65
TTC3-220ENST00000487711 PRRT4C9JH25 899 aa4.75□□□□□ -1.65
TTC3-220ENST00000487711 CA12O43570 354 aa4.75□□□□□ -1.65
TTC3-220ENST00000487711 USP1O94782 785 aa4.75□□□□□ -1.65
TTC3-220ENST00000487711 MT-CO3P00414 261 aa4.75□□□□□ -1.65
TTC3-220ENST00000487711 VIPP01282 170 aa4.75□□□□□ -1.65
TTC3-220ENST00000487711 CHRM5P08912 532 aaPredicted RBP4.75□□□□□ -1.65
TTC3-220ENST00000487711 SRGAP2BP0DMP2 458 aa4.75□□□□□ -1.65
TTC3-220ENST00000487711 APEHP13798 732 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms