RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 NFATC1O95644 943 aa17.5■□□□□ 0.39
CCHCR1-214ENST00000486060 ERCC5P28715 1186 aaPredicted RBP17.5■□□□□ 0.39
CCHCR1-214ENST00000486060 ATP5C1P36542 298 aaKnown RBP17.5■□□□□ 0.39
CCHCR1-214ENST00000486060 SLC6A11P48066 632 aa17.5■□□□□ 0.39
CCHCR1-214ENST00000486060 TKTL1P51854 596 aa17.5■□□□□ 0.39
CCHCR1-214ENST00000486060 CNGA2Q16280 664 aa17.5■□□□□ 0.39
CCHCR1-214ENST00000486060 PM20D1Q6GTS8 502 aa17.5■□□□□ 0.39
CCHCR1-214ENST00000486060 ZNF276Q8N554 614 aa17.5■□□□□ 0.39
CCHCR1-214ENST00000486060 ZBTB44Q8NCP5 570 aa17.5■□□□□ 0.39
CCHCR1-214ENST00000486060 CD101Q93033 1021 aa17.5■□□□□ 0.39
CCHCR1-214ENST00000486060 P2RY11Q96G91 374 aa17.5■□□□□ 0.39
CCHCR1-214ENST00000486060 SIX2Q9NPC8 291 aa17.5■□□□□ 0.39
CCHCR1-214ENST00000486060 UBE2TQ9NPD8 197 aaPredicted RBP17.5■□□□□ 0.39
CCHCR1-214ENST00000486060 ACP6Q9NPH0 428 aa17.5■□□□□ 0.39
CCHCR1-214ENST00000486060 SAMSN1Q9NSI8 373 aaKnown RBP17.5■□□□□ 0.39
CCHCR1-214ENST00000486060 NAGPAQ9UK23 515 aa17.5■□□□□ 0.39
CCHCR1-214ENST00000486060 KIAA1257Q9ULG3 409 aa17.5■□□□□ 0.39
CCHCR1-214ENST00000486060 GVINP1Q7Z2Y8 2422 aa17.49■□□□□ 0.39
CCHCR1-214ENST00000486060 BECN2A8MW95 431 aa17.49■□□□□ 0.39
CCHCR1-214ENST00000486060 LILRB5O75023 590 aa17.49■□□□□ 0.39
CCHCR1-214ENST00000486060 CHRM1P11229 460 aaPredicted RBP17.49■□□□□ 0.39
CCHCR1-214ENST00000486060 PLA2G4AP47712 749 aa17.49■□□□□ 0.39
CCHCR1-214ENST00000486060 CXCL12P48061 93 aa17.49■□□□□ 0.39
CCHCR1-214ENST00000486060 CCR3P51677 355 aa17.49■□□□□ 0.39
CCHCR1-214ENST00000486060 GRSF1Q12849 480 aaKnown RBP eCLIP17.49■□□□□ 0.39
CCHCR1-214ENST00000486060 LY6G5CQ5SRR4 150 aa17.49■□□□□ 0.39
CCHCR1-214ENST00000486060 PMF1Q6P1K2 205 aa17.49■□□□□ 0.39
CCHCR1-214ENST00000486060 KLHDC10Q6PID8 442 aa17.49■□□□□ 0.39
CCHCR1-214ENST00000486060 HTR3DQ70Z44 454 aa17.49■□□□□ 0.39
CCHCR1-214ENST00000486060 SYNPOQ8N3V7 929 aa17.49■□□□□ 0.39
CCHCR1-214ENST00000486060 SLC35F5Q8WV83 523 aa17.49■□□□□ 0.39
CCHCR1-214ENST00000486060 NKD2Q969F2 451 aaPredicted RBP17.49■□□□□ 0.39
CCHCR1-214ENST00000486060 CLIC5Q9NZA1 410 aa17.49■□□□□ 0.39
CCHCR1-214ENST00000486060 ZNF292O60281 2723 aa17.49■□□□□ 0.39
CCHCR1-214ENST00000486060 SDK1Q7Z5N4 2213 aa17.49■□□□□ 0.39
CCHCR1-214ENST00000486060 SLC9A3R1O14745 358 aaPredicted RBP17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 RNF40O75150 1001 aa17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 PAPSS2O95340 614 aaPredicted RBP17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 KLKB1P03952 638 aa17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 DRD1P21728 446 aa17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 PON1P27169 355 aa17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 MTIF2P46199 727 aaKnown RBP17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 RGS7P49802 495 aa17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 YWHAGP61981 247 aaKnown RBP eCLIP17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 ADIGQ0VDE8 80 aa17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 NR1H3Q13133 447 aa17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 MAN2A1Q16706 1144 aa17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 C10orf120Q5SQS8 335 aa17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 TMEM25Q86YD3 366 aa17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 SUMF1Q8NBK3 374 aa17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 KCTD13Q8WZ19 329 aa17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 SECISBP2LQ93073 1101 aaKnown RBP17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 NACA2Q9H009 215 aa17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 ZSCAN32Q9NX65 697 aa17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 TBC1D14Q9P2M4 693 aa17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 HESX1Q9UBX0 185 aa17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 SH3BP1Q9Y3L3 701 aa17.48■□□□□ 0.39
CCHCR1-214ENST00000486060 GTPBP10A4D1E9 387 aaKnown RBP17.47■□□□□ 0.39
CCHCR1-214ENST00000486060 YJEFN3A6XGL0 299 aa17.47■□□□□ 0.39
CCHCR1-214ENST00000486060 E7ENQ6 273 aa17.47■□□□□ 0.39
CCHCR1-214ENST00000486060 K7EQS6 105 aa17.47■□□□□ 0.39
CCHCR1-214ENST00000486060 PIK3R2O00459 728 aa17.47■□□□□ 0.39
CCHCR1-214ENST00000486060 STC2O76061 302 aa17.47■□□□□ 0.39
CCHCR1-214ENST00000486060 ZBED1O96006 694 aa17.47■□□□□ 0.39
CCHCR1-214ENST00000486060 SETSIPP0DME0 302 aa17.47■□□□□ 0.39
CCHCR1-214ENST00000486060 PSEN1P49768 467 aa17.47■□□□□ 0.39
CCHCR1-214ENST00000486060 AMPD2Q01433 879 aa17.47■□□□□ 0.39
CCHCR1-214ENST00000486060 TPD52L1Q16890 204 aaPredicted RBP17.47■□□□□ 0.39
CCHCR1-214ENST00000486060 GBP6Q6ZN66 633 aa17.47■□□□□ 0.39
CCHCR1-214ENST00000486060 Q6ZNB5 142 aa17.47■□□□□ 0.39
CCHCR1-214ENST00000486060 PHTF2Q8N3S3 785 aa17.47■□□□□ 0.39
CCHCR1-214ENST00000486060 DNMT3LQ9UJW3 386 aa17.47■□□□□ 0.39
CCHCR1-214ENST00000486060 CHURC1-FNTBB4DL54 471 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 M0QYV0 167 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 RALAP11233 206 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 ADH5P11766 374 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 KRT5P13647 590 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 DAOAP59103 153 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 KCNMA1Q12791 1236 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 EXOC3L4Q17RC7 722 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 DENND1BQ6P3S1 775 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 C11orf57Q6ZUT1 292 aaPredicted RBP17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 MIB1Q86YT6 1006 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 ETFBKMTQ8IXQ9 262 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 CLEC4CQ8WTT0 213 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 OTUB2Q96DC9 234 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 TUBGCP2Q9BSJ2 902 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 LRRC4Q9HBW1 653 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 SPHK2Q9NRA0 654 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 APEX2Q9UBZ4 518 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 DACH1Q9UI36 760 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 CYTH4Q9UIA0 394 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 RASAL2Q9UJF2 1139 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 PCDHGA2Q9Y5H1 932 aa17.46■□□□□ 0.39
CCHCR1-214ENST00000486060 ABCA7Q8IZY2 2146 aa17.45■□□□□ 0.38
CCHCR1-214ENST00000486060 DMXL1Q9Y485 3027 aa17.45■□□□□ 0.38
CCHCR1-214ENST00000486060 KCNJ18B7U540 433 aa17.45■□□□□ 0.38
CCHCR1-214ENST00000486060 TRIM24O15164 1050 aa17.45■□□□□ 0.38
CCHCR1-214ENST00000486060 HOXC11O43248 304 aaPredicted RBP17.45■□□□□ 0.38
CCHCR1-214ENST00000486060 LCP1P13796 627 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms