RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	EIF2D	P41214	584 aa	Known RBP	14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	TUB	P50607	506 aa		14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	NDUFA8	P51970	172 aa		14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	KDSR	Q06136	332 aa		14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	MESP2	Q0VG99	397 aa		14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	ORC1	Q13415	861 aa		14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	ANO4	Q32M45	955 aa		14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	SPOPL	Q6IQ16	392 aa		14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	SV2A	Q7L0J3	742 aa		14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	SFTPA1	Q8IWL2	248 aa		14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	FAM186B	Q8IYM0	893 aa		14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	SLC2A14	Q8TDB8	520 aa		14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	TMEM174	Q8WUU8	243 aa		14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	SDCBP2	Q9H190	292 aa		14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	POLM	Q9NP87	494 aa	Predicted RBP	14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	GMIP	Q9P107	970 aa		14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	BCCIP	Q9P287	314 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	MAPK8IP1	Q9UQF2	711 aa		14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	TRAF3IP3	Q9Y228	551 aa		14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	HPSE	Q9Y251	543 aa		14.01	□□□□□ -0.17
UBA3-210	ENST00000485424	PATE3	B3GLJ2	98 aa		14	□□□□□ -0.17
UBA3-210	ENST00000485424	GIPC1	O14908	333 aa		14	□□□□□ -0.17
UBA3-210	ENST00000485424	MAPK13	O15264	365 aa		14	□□□□□ -0.17
UBA3-210	ENST00000485424	RHOBTB3	O94955	611 aa		14	□□□□□ -0.17
UBA3-210	ENST00000485424	ASS1	P00966	412 aa	Known RBP	14	□□□□□ -0.17
UBA3-210	ENST00000485424	PSMC2	P35998	433 aa	Known RBP	14	□□□□□ -0.17
UBA3-210	ENST00000485424	NOVA1	P51513	510 aa	Known RBP	14	□□□□□ -0.17
UBA3-210	ENST00000485424	CRY1	Q16526	586 aa		14	□□□□□ -0.17
UBA3-210	ENST00000485424	EOGT	Q5NDL2	527 aa		14	□□□□□ -0.17
UBA3-210	ENST00000485424	LY6G5C	Q5SRR4	150 aa		14	□□□□□ -0.17
UBA3-210	ENST00000485424	TMEM92	Q6UXU6	159 aa		14	□□□□□ -0.17
UBA3-210	ENST00000485424	CYP2U1	Q7Z449	544 aa		14	□□□□□ -0.17
UBA3-210	ENST00000485424	C12orf40	Q86WS4	652 aa		14	□□□□□ -0.17
UBA3-210	ENST00000485424	FUK	Q8N0W3	1084 aa		14	□□□□□ -0.17
UBA3-210	ENST00000485424	CRYBG2	Q8N1P7	616 aa		14	□□□□□ -0.17
UBA3-210	ENST00000485424	PGBD3	Q8N328	593 aa		14	□□□□□ -0.17
UBA3-210	ENST00000485424	JAKMIP2	Q96AA8	810 aa		14	□□□□□ -0.17
UBA3-210	ENST00000485424	SPACA7	Q96KW9	195 aa		14	□□□□□ -0.17
UBA3-210	ENST00000485424	NT5C1A	Q9BXI3	368 aa		14	□□□□□ -0.17
UBA3-210	ENST00000485424	CCSER2	Q9H7U1	834 aa		14	□□□□□ -0.17
UBA3-210	ENST00000485424	LSM7	Q9UK45	103 aa	Known RBP	14	□□□□□ -0.17
UBA3-210	ENST00000485424	TBC1D3B	A6NDS4	549 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	TNFRSF10B	O14763	440 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	ZBTB24	O43167	697 aa	Predicted RBP	13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	TLR5	O60602	858 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	KLF8	O95600	359 aa	Predicted RBP	13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	TRIM49	P0CI25	452 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	TRIM49C	P0CI26	452 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	CD58	P19256	250 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	ATP5C1	P36542	298 aa	Known RBP	13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	GRIA2	P42262	883 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	SLC6A11	P48066	632 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	GCLM	P48507	274 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	ZNF252P-AS1	Q0IIN9	211 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	ADAM9	Q13443	819 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	HSF5	Q4G112	596 aa	Predicted RBP	13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	SNX30	Q5VWJ9	437 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	RHBDF2	Q6PJF5	856 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	KRBA2	Q6ZNG9	492 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	PAQR9	Q6ZVX9	377 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	TRMT11	Q7Z4G4	463 aa	Known RBP	13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	ALLC	Q8N6M5	410 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	NAT16	Q8N8M0	369 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	IL17RC	Q8NAC3	791 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	TXNDC5	Q8NBS9	432 aa	Known RBP	13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	OLIG1	Q8TAK6	271 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	CYFIP2	Q96F07	1278 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	SMO	Q99835	787 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	CYP3A43	Q9HB55	503 aa		13.99	□□□□□ -0.17
UBA3-210	ENST00000485424	GOLGA6L4	A6NEF3	574 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	SGK1	O00141	431 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	KHNYN	O15037	678 aa	Known RBP	13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	STX10	O60499	249 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	ZNF202	O95125	648 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	EPB41	P11171	864 aa	Known RBP	13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	ACO1	P21399	889 aa	Known RBP	13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	TNFRSF4	P43489	277 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	ASPA	P45381	313 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	DPYD	Q12882	1025 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	BYSL	Q13895	437 aa	Known RBP	13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	NUMA1	Q14980	2115 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	NFIL3	Q16649	462 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	DAB2IP	Q5VWQ8	1189 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	TADA2B	Q86TJ2	420 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	GUF1	Q8N442	669 aa	Known RBP	13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	C12orf29	Q8N999	325 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	WHAMM	Q8TF30	809 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	XPO6	Q96QU8	1125 aa	Known RBP	13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	NIF3L1	Q9GZT8	377 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	CSNK1G1	Q9HCP0	422 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	ZDHHC4	Q9NPG8	344 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	TMEM9B	Q9NQ34	198 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	SPHK2	Q9NRA0	654 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	DEC1	Q9P2X7	70 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	HMGXB4	Q9UGU5	601 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	PCDHA5	Q9Y5H7	936 aa		13.98	□□□□□ -0.17
UBA3-210	ENST00000485424	ATRX	P46100	2492 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424		A0A1W2PQ27	194 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424		A0A1W2PQ64	194 aa		13.97	□□□□□ -0.17

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