RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 HUS1BQ8NHY5 278 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 KLHDC4Q8TBB5 520 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 CAGE1Q8TC20 777 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 ZNF507Q8TCN5 953 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 URGCPQ8TCY9 931 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 SCFD2Q8WU76 684 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 METTL21AQ8WXB1 218 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 PIBF1Q8WXW3 757 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 THRSPQ92748 146 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 RILPL2Q969X0 211 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 VWCEQ96DN2 955 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 KTI12Q96EK9 354 aaPredicted RBP3.66□□□□□ -1.82
FXN-204ENST00000484259 MAML3Q96JK9 1138 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 SMC6Q96SB8 1091 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 RUFY1Q96T51 708 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 KCNK16Q96T55 309 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 MNTQ99583 582 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 EIF3CQ99613 913 aaKnown RBP3.66□□□□□ -1.82
FXN-204ENST00000484259 RAD9AQ99638 391 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 TSG101Q99816 390 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 ERP44Q9BS26 406 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 WDR26Q9H7D7 661 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 NOD2Q9HC29 1040 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 SARS2Q9NP81 518 aaKnown RBP3.66□□□□□ -1.82
FXN-204ENST00000484259 A1CFQ9NQ94 594 aaKnown RBP3.66□□□□□ -1.82
FXN-204ENST00000484259 CYP26B1Q9NR63 512 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 NDFIP2Q9NV92 336 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 TMEM184CQ9NVA4 438 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 POLR3BQ9NW08 1133 aaPredicted RBP3.66□□□□□ -1.82
FXN-204ENST00000484259 HCFC1R1Q9NWW0 138 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 RAB20Q9NX57 234 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 MOCS1Q9NZB8 636 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 NDUFAF4Q9P032 175 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 MYO1AQ9UBC5 1043 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 BAIAP2L1Q9UHR4 511 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 MAD2L2Q9UI95 211 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 APPL1Q9UKG1 709 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 ATXN7L1Q9ULK2 861 aaPredicted RBP3.66□□□□□ -1.82
FXN-204ENST00000484259 AGAP1Q9UPQ3 857 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 TNFSF13BQ9Y275 285 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 RPH3AQ9Y2J0 694 aaPredicted RBP3.66□□□□□ -1.82
FXN-204ENST00000484259 HIF3AQ9Y2N7 669 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 CBY1Q9Y3M2 126 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 GPC6Q9Y625 555 aaPredicted RBP3.66□□□□□ -1.82
FXN-204ENST00000484259 CLCA3PQ9Y6N3 262 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 PMF1-BGLAPU3KQ54 211 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 CHD1O14646 1710 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 MYPNQ86TC9 1320 aa3.66□□□□□ -1.82
FXN-204ENST00000484259 TRAV34A0A0B4J273 112 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 PTPDC1A2A3K4 754 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 A4D1N5 150 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 BLACEA4D250 179 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 GOLGA6L4A6NEF3 574 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 HMX3A6NHT5 357 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 SLC9B1P1A6NJY1 282 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 SLC22A31A6NKX4 558 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 ERVH48-1M5A8F1 160 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 TRDMT1O14717 391 aaKnown RBP3.65□□□□□ -1.83
FXN-204ENST00000484259 PER2O15055 1255 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 ADAM20O43506 726 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 TLR2O60603 784 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 TACC1O75410 805 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 HTR3BO95264 441 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 FTCDO95954 541 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 OPN1LWP04000 364 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 HMGCRP04035 888 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 CLEC3BP05452 202 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 ITGA2BP08514 1039 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 ITGA5P08648 1049 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 MYBL1P10243 752 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 ARP10275 920 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 ANXA8P13928 327 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 YBX3P16989 372 aaKnown RBP eCLIP3.65□□□□□ -1.832e-8■■■□□ 17.5
FXN-204ENST00000484259 SAT1P21673 171 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 ITPKAP23677 461 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 ABCD3P28288 659 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 GCH1P30793 250 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 CORO1AP31146 461 aaKnown RBP3.65□□□□□ -1.83
FXN-204ENST00000484259 HOXC8P31273 242 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 CCR1P32246 355 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 CIITAP33076 1130 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 SLC16A2P36021 539 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 ETV3P41162 512 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 WNT5AP41221 380 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 GRM5P41594 1212 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 RABIFP47224 123 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 OR1G1P47890 313 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 KCNC1P48547 511 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 MTNR1BP49286 362 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 IDH3AP50213 366 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 CCT4P50991 539 aaKnown RBP3.65□□□□□ -1.83
FXN-204ENST00000484259 ARSDP51689 593 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 SLC16A1P53985 500 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 ALDH18A1P54886 795 aaKnown RBP3.65□□□□□ -1.83
FXN-204ENST00000484259 TRA2BP62995 288 aaKnown RBP3.65□□□□□ -1.83
FXN-204ENST00000484259 ABATP80404 500 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 MRPS5P82675 430 aaKnown RBP3.65□□□□□ -1.83
FXN-204ENST00000484259 CDK17Q00537 523 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 FMO1Q01740 532 aa3.65□□□□□ -1.83
FXN-204ENST00000484259 ELP6Q0PNE2 266 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms