RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 TMC8Q8IU68 726 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 CBWD2Q8IUF1 395 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 CCNJLQ8IV13 435 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 ARID3BQ8IVW6 561 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-215ENST00000484203 SYNPOQ8N3V7 929 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 OR10T2Q8NGX3 314 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 SHKBP1Q8TBC3 707 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 FEZF2Q8TBJ5 459 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 SCFD1Q8WVM8 642 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 FOXD4L4Q8WXT5 416 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-215ENST00000484203 TAF4BQ92750 862 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 SECISBP2LQ93073 1101 aaKnown RBP6.58□□□□□ -1.36
PTCD3-215ENST00000484203 CLDN23Q96B33 292 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 TCEAL4Q96EI5 215 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 TRMT2BQ96GJ1 504 aaKnown RBP6.58□□□□□ -1.36
PTCD3-215ENST00000484203 PAGE5Q96GU1 130 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 SPATA17Q96L03 361 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 MYRFLQ96LU7 910 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 MMS19Q96T76 1030 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 TCF12Q99081 682 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 CGRRF1Q99675 332 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 RPP25Q9BUL9 199 aaKnown RBP6.58□□□□□ -1.36
PTCD3-215ENST00000484203 LRRC3Q9BY71 257 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 SNX25Q9H3E2 840 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 SRA1Q9HD15 236 aaKnown RBP6.58□□□□□ -1.36
PTCD3-215ENST00000484203 LTB4R2Q9NPC1 389 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 PCDHGA2Q9Y5H1 932 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 WDR81Q562E7 1941 aa6.58□□□□□ -1.36
PTCD3-215ENST00000484203 F5P12259 2224 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 ATP8B3O60423 1300 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 FAM186AA6NE01 2351 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 FAM237AA0A1B0GTK4 181 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 HEPACAM2A8MVW5 462 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 C1QTNF9BB2RNN3 333 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 H3BRJ5 948 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 MAPK13O15264 365 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 TGFB1I1O43294 461 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 PI15O43692 258 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 STX10O60499 249 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 VNN2O95498 520 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 LMNAP02545 664 aaKnown RBP6.57□□□□□ -1.36
PTCD3-215ENST00000484203 PFKFB1P16118 471 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 WARSP23381 471 aaKnown RBP6.57□□□□□ -1.36
PTCD3-215ENST00000484203 FCARP24071 287 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 ANXA13P27216 316 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 GNL1P36915 607 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-215ENST00000484203 CCR2P41597 374 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 CYP2J2P51589 502 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 ZNF268Q14587 947 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-215ENST00000484203 KCNB1Q14721 858 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 SOWAHAQ2M3V2 549 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 WDR72Q3MJ13 1102 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 FOXD4L6Q3SYB3 417 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-215ENST00000484203 GPR158Q5T848 1215 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 CC2D1AQ6P1N0 951 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-215ENST00000484203 FAM171BQ6P995 826 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 SHISA2Q6UWI4 295 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 FOXD4L3Q6VB84 417 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-215ENST00000484203 GAREM2Q75VX8 874 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 MON1AQ86VX9 555 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 NELFCDQ8IXH7 590 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 CMTM8Q8IZV2 173 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 TTC39CQ8N584 583 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 CCDC150Q8NCX0 1101 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 CXorf38Q8TB03 319 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 BPIFB1Q8TDL5 484 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 ATRIPQ8WXE1 791 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 FAM3CQ92520 227 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 CCDC127Q96BQ5 260 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 FAXDC2Q96IV6 333 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 TNIP3Q96KP6 325 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 SYT15Q9BQS2 421 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 IMPG2Q9BZV3 1241 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 ELOVL4Q9GZR5 314 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 FAM124BQ9H5Z6 455 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-215ENST00000484203 ZNF334Q9HCZ1 680 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-215ENST00000484203 SLC39A2Q9NP94 309 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 SPATA6Q9NWH7 488 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-215ENST00000484203 RMND1Q9NWS8 449 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 DLGAP2Q9P1A6 1054 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 MAGEC2Q9UBF1 373 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-215ENST00000484203 SIX4Q9UIU6 781 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 SOX13Q9UN79 622 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 L1RE1Q9UN81 338 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 HPSEQ9Y251 543 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 PIAS3Q9Y6X2 628 aa6.57□□□□□ -1.36
PTCD3-215ENST00000484203 A0A096LPE4 126 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 TRAV19A0A0A6YYK7 116 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 A0A1W2PPZ6 126 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 C9orf172C9J069 976 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 KINO60870 393 aaKnown RBP6.56□□□□□ -1.36
PTCD3-215ENST00000484203 ATG13O75143 517 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 MOSPD3O75425 235 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 NOL4O94818 638 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 RHOBTB3O94955 611 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 SMC2O95347 1197 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 DCNP07585 359 aaKnown RBP6.56□□□□□ -1.36
PTCD3-215ENST00000484203 USP17L7P0C7H9 530 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 KRT13P13646 458 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 ATF6P18850 670 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms