RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 PMM2O15305 246 aa20.92■□□□□ 0.94
MSH5-215ENST00000482280 HRO43593 1189 aa20.92■□□□□ 0.94
MSH5-215ENST00000482280 KAT7O95251 611 aa20.92■□□□□ 0.94
MSH5-215ENST00000482280 TBX18O95935 607 aa20.92■□□□□ 0.94
MSH5-215ENST00000482280 GRIA2P42262 883 aa20.92■□□□□ 0.94
MSH5-215ENST00000482280 MRPS21P82921 87 aaKnown RBP20.92■□□□□ 0.94
MSH5-215ENST00000482280 KDSRQ06136 332 aa20.92■□□□□ 0.94
MSH5-215ENST00000482280 TMEM270Q6UE05 265 aa20.92■□□□□ 0.94
MSH5-215ENST00000482280 HTR3DQ70Z44 454 aa20.92■□□□□ 0.94
MSH5-215ENST00000482280 MIB1Q86YT6 1006 aa20.92■□□□□ 0.94
MSH5-215ENST00000482280 SIX6OS1Q8N1H7 587 aa20.92■□□□□ 0.94
MSH5-215ENST00000482280 TSTD1Q8NFU3 115 aa20.92■□□□□ 0.94
MSH5-215ENST00000482280 XPO6Q96QU8 1125 aaKnown RBP20.92■□□□□ 0.94
MSH5-215ENST00000482280 KLF16Q9BXK1 252 aaPredicted RBP20.92■□□□□ 0.94
MSH5-215ENST00000482280 SRRTQ9BXP5 876 aaKnown RBP20.92■□□□□ 0.94
MSH5-215ENST00000482280 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.92■□□□□ 0.94
MSH5-215ENST00000482280 KIAA1468Q9P260 1216 aa20.92■□□□□ 0.94
MSH5-215ENST00000482280 RASAL2Q9UJF2 1139 aa20.92■□□□□ 0.94
MSH5-215ENST00000482280 TSPAN16Q9UKR8 245 aa20.92■□□□□ 0.94
MSH5-215ENST00000482280 TBC1D3BA6NDS4 549 aa20.91■□□□□ 0.94
MSH5-215ENST00000482280 AXIN1O15169 862 aa20.91■□□□□ 0.94
MSH5-215ENST00000482280 ALDH1A2O94788 518 aa20.91■□□□□ 0.94
MSH5-215ENST00000482280 AFPP02771 609 aaKnown RBP20.91■□□□□ 0.94
MSH5-215ENST00000482280 RETP07949 1114 aa20.91■□□□□ 0.94
MSH5-215ENST00000482280 SDHBP21912 280 aa20.91■□□□□ 0.94
MSH5-215ENST00000482280 TKTL1P51854 596 aa20.91■□□□□ 0.94
MSH5-215ENST00000482280 COG7P83436 770 aa20.91■□□□□ 0.94
MSH5-215ENST00000482280 LMNB2Q03252 620 aa20.91■□□□□ 0.94
MSH5-215ENST00000482280 BST2Q10589 180 aaKnown RBP20.91■□□□□ 0.94
MSH5-215ENST00000482280 SRSF5Q13243 272 aaKnown RBP20.91■□□□□ 0.94
MSH5-215ENST00000482280 TPD52L1Q16890 204 aaPredicted RBP20.91■□□□□ 0.94
MSH5-215ENST00000482280 NAT16Q8N8M0 369 aa20.91■□□□□ 0.94
MSH5-215ENST00000482280 USP33Q8TEY7 942 aa20.91■□□□□ 0.94
MSH5-215ENST00000482280 GAB3Q8WWW8 586 aa20.91■□□□□ 0.94
MSH5-215ENST00000482280 NMUR1Q9HB89 426 aa20.91■□□□□ 0.94
MSH5-215ENST00000482280 WDR35Q9P2L0 1181 aa20.91■□□□□ 0.94
MSH5-215ENST00000482280 NUDT5Q9UKK9 219 aa20.91■□□□□ 0.94
MSH5-215ENST00000482280 ZNF510Q9Y2H8 683 aa20.91■□□□□ 0.94
MSH5-215ENST00000482280 USP3Q9Y6I4 520 aa20.91■□□□□ 0.94
MSH5-215ENST00000482280 PTPRZ1P23471 2315 aaPredicted RBP20.9■□□□□ 0.94
MSH5-215ENST00000482280 MYH10P35580 1976 aa20.9■□□□□ 0.94
MSH5-215ENST00000482280 XPO1O14980 1071 aaKnown RBP20.9■□□□□ 0.94
MSH5-215ENST00000482280 HOXC11O43248 304 aaPredicted RBP20.9■□□□□ 0.94
MSH5-215ENST00000482280 ZBED1O96006 694 aa20.9■□□□□ 0.94
MSH5-215ENST00000482280 PAEPP09466 180 aa20.9■□□□□ 0.94
MSH5-215ENST00000482280 SETSIPP0DME0 302 aa20.9■□□□□ 0.94
MSH5-215ENST00000482280 BMP6P22004 513 aa20.9■□□□□ 0.94
MSH5-215ENST00000482280 TNFRSF4P43489 277 aa20.9■□□□□ 0.94
MSH5-215ENST00000482280 SLC6A11P48066 632 aa20.9■□□□□ 0.94
MSH5-215ENST00000482280 PGFP49763 221 aa20.9■□□□□ 0.94
MSH5-215ENST00000482280 YWHAGP61981 247 aaKnown RBP eCLIP20.9■□□□□ 0.94
MSH5-215ENST00000482280 KCNH2Q12809 1159 aa20.9■□□□□ 0.94
MSH5-215ENST00000482280 STILQ15468 1287 aa20.9■□□□□ 0.94
MSH5-215ENST00000482280 HSF5Q4G112 596 aaPredicted RBP20.9■□□□□ 0.94
MSH5-215ENST00000482280 CACNA2D4Q7Z3S7 1137 aa20.9■□□□□ 0.94
MSH5-215ENST00000482280 TRMT11Q7Z4G4 463 aaKnown RBP20.9■□□□□ 0.94
MSH5-215ENST00000482280 TTC30AQ86WT1 665 aa20.9■□□□□ 0.94
MSH5-215ENST00000482280 BBS2Q9BXC9 721 aa20.9■□□□□ 0.94
MSH5-215ENST00000482280 DCLK3Q9C098 648 aa20.9■□□□□ 0.94
MSH5-215ENST00000482280 OSER1Q9NX31 292 aa20.9■□□□□ 0.94
MSH5-215ENST00000482280 NEDD8-MDP1E9PL57 170 aa20.89■□□□□ 0.93
MSH5-215ENST00000482280 K7EQS6 105 aa20.89■□□□□ 0.93
MSH5-215ENST00000482280 MDM4O15151 490 aa20.89■□□□□ 0.93
MSH5-215ENST00000482280 ZBTB24O43167 697 aaPredicted RBP20.89■□□□□ 0.93
MSH5-215ENST00000482280 TIE1P35590 1138 aa20.89■□□□□ 0.93
MSH5-215ENST00000482280 DGKEP52429 567 aa20.89■□□□□ 0.93
MSH5-215ENST00000482280 PDE4CQ08493 712 aa20.89■□□□□ 0.93
MSH5-215ENST00000482280 EFEMP1Q12805 493 aa20.89■□□□□ 0.93
MSH5-215ENST00000482280 EOGTQ5NDL2 527 aa20.89■□□□□ 0.93
MSH5-215ENST00000482280 TPGS1Q6ZTW0 290 aa20.89■□□□□ 0.93
MSH5-215ENST00000482280 TMEM25Q86YD3 366 aa20.89■□□□□ 0.93
MSH5-215ENST00000482280 ZNF276Q8N554 614 aa20.89■□□□□ 0.93
MSH5-215ENST00000482280 CCDC33Q8N5R6 958 aa20.89■□□□□ 0.93
MSH5-215ENST00000482280 RNF139Q8WU17 664 aa20.89■□□□□ 0.93
MSH5-215ENST00000482280 EZH1Q92800 747 aaPredicted RBP20.89■□□□□ 0.93
MSH5-215ENST00000482280 GOLGA1Q92805 767 aa20.89■□□□□ 0.93
MSH5-215ENST00000482280 POLMQ9NP87 494 aaPredicted RBP20.89■□□□□ 0.93
MSH5-215ENST00000482280 OLA1Q9NTK5 396 aaKnown RBP20.89■□□□□ 0.93
MSH5-215ENST00000482280 RWDD2AQ9UIY3 292 aa20.89■□□□□ 0.93
MSH5-215ENST00000482280 MMP17Q9ULZ9 603 aa20.89■□□□□ 0.93
MSH5-215ENST00000482280 USP34Q70CQ2 3546 aa20.88■□□□□ 0.93
MSH5-215ENST00000482280 PRR5-ARHGAP8B1AHC4 643 aa20.88■□□□□ 0.93
MSH5-215ENST00000482280 FOXD2O60548 495 aaPredicted RBP20.88■□□□□ 0.93
MSH5-215ENST00000482280 LRP3O75074 770 aa20.88■□□□□ 0.93
MSH5-215ENST00000482280 KLF8O95600 359 aaPredicted RBP20.88■□□□□ 0.93
MSH5-215ENST00000482280 ARHGAP8P85298 464 aa20.88■□□□□ 0.93
MSH5-215ENST00000482280 SPEM2Q0P670 501 aa20.88■□□□□ 0.93
MSH5-215ENST00000482280 ELF2Q15723 593 aa20.88■□□□□ 0.93
MSH5-215ENST00000482280 GAB4Q2WGN9 574 aa20.88■□□□□ 0.93
MSH5-215ENST00000482280 USP39Q53GS9 565 aaKnown RBP20.88■□□□□ 0.93
MSH5-215ENST00000482280 GRAMD4Q6IC98 578 aa20.88■□□□□ 0.93
MSH5-215ENST00000482280 SCD5Q86SK9 330 aa20.88■□□□□ 0.93
MSH5-215ENST00000482280 TRIM59Q8IWR1 403 aa20.88■□□□□ 0.93
MSH5-215ENST00000482280 FAM160A2Q8N612 972 aaPredicted RBP20.88■□□□□ 0.93
MSH5-215ENST00000482280 UBA3Q8TBC4 463 aa20.88■□□□□ 0.93
MSH5-215ENST00000482280 DNAJC17Q9NVM6 304 aaKnown RBP20.88■□□□□ 0.93
MSH5-215ENST00000482280 MARCH2Q9P0N8 246 aa20.88■□□□□ 0.93
MSH5-215ENST00000482280 FAM186AA6NE01 2351 aa20.88■□□□□ 0.93
MSH5-215ENST00000482280 MYO16Q9Y6X6 1858 aa20.88■□□□□ 0.93
MSH5-215ENST00000482280 TULP3O75386 442 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms