RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 ALLCQ8N6M5 410 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 GOLGA6L1Q8N7Z2 621 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 OR10T2Q8NGX3 314 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 HASPINQ8TF76 798 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 ATG4AQ8WYN0 398 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 CCDC114Q96M63 670 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 CALN1Q9BXU9 219 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 TXLNGYQ9BZA5 131 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 TRIM31Q9BZY9 425 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 PCDH18Q9HCL0 1135 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.2□□□□□ -0.46
GGPS1-205ENST00000482013 TBX21Q9UL17 535 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 DNPEPQ9ULA0 475 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 ZNF148Q9UQR1 794 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 USP3Q9Y6I4 520 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 TET1Q8NFU7 2136 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 CFAP69A5D8W1 941 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 SPDYE4A6NLX3 237 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 H7C4K7 107 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 SMAPO00193 183 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 EFCAB14O75071 495 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 ZNF189O75820 626 aaPredicted RBP12.19□□□□□ -0.46
GGPS1-205ENST00000482013 KRT14P02533 472 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 ATF2P15336 505 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 FGFR3P22607 806 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 KLRC2P26717 231 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 HOXD11P31277 338 aaPredicted RBP12.19□□□□□ -0.46
GGPS1-205ENST00000482013 L1CAMP32004 1257 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 RDXP35241 583 aaKnown RBP12.19□□□□□ -0.46
GGPS1-205ENST00000482013 NDUFV1P49821 464 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 SULT1E1P49888 294 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 ATN1P54259 1190 aaPredicted RBP12.19□□□□□ -0.46
GGPS1-205ENST00000482013 PLTPP55058 493 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 ADCY2Q08462 1091 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 NOMO1Q15155 1222 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 LLGL1Q15334 1064 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 CCDC142Q17RM4 750 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 ANKRD20A8PQ5CZ79 823 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 GSTA5Q7RTV2 222 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 TMC3Q7Z5M5 1100 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 LRRTM3Q86VH5 581 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 LRRC43Q8N309 656 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 TSEN2Q8NCE0 465 aaKnown RBP12.19□□□□□ -0.46
GGPS1-205ENST00000482013 NTAN1Q96AB6 310 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 RUFY1Q96T51 708 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 KCNK16Q96T55 309 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 NEUROG2Q9H2A3 272 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 PCDH9Q9HC56 1237 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 TMLHEQ9NVH6 421 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 COMMD8Q9NX08 183 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 DNAJB4Q9UDY4 337 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 ASIC3Q9UHC3 531 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 FZD10Q9ULW2 581 aa12.19□□□□□ -0.46
GGPS1-205ENST00000482013 SF3B1O75533 1304 aaKnown RBP eCLIP12.18□□□□□ -0.469e-6■■■■■ 68.9
GGPS1-205ENST00000482013 ABHD14A-ACY1A0A1B0GW23 586 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 APOL1O14791 398 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 CAPN9O14815 690 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 TRIM66O15016 1216 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 MYCP01106 439 aaPredicted RBP12.18□□□□□ -0.46
GGPS1-205ENST00000482013 GALTP07902 379 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 CD48P09326 243 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 CLTBP09497 229 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 IL4RP24394 825 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 ADCY8P40145 1251 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 NR2C2P49116 596 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 CCL23P55773 120 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 FAM193AP78312 1265 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 OTUD4Q01804 1114 aaKnown RBP12.18□□□□□ -0.46
GGPS1-205ENST00000482013 DHX9Q08211 1270 aaKnown RBP12.18□□□□□ -0.46
GGPS1-205ENST00000482013 XRCC4Q13426 336 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 DCAF6Q58WW2 860 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 SLC9A4Q6AI14 798 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 ZNF280DQ6N043 979 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 RHBDF2Q6PJF5 856 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 C4orf22Q6V702 233 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 BZW1Q7L1Q6 419 aaKnown RBP12.18□□□□□ -0.46
GGPS1-205ENST00000482013 PCGF5Q86SE9 256 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 CROCCP2Q86T23 111 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 ACTL9Q8TC94 416 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 FBXO25Q8TCJ0 367 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.18□□□□□ -0.46
GGPS1-205ENST00000482013 C2orf15Q8WU43 125 aaKnown RBP12.18□□□□□ -0.46
GGPS1-205ENST00000482013 P3H4Q92791 437 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 ACSF2Q96CM8 615 aaPredicted RBP12.18□□□□□ -0.46
GGPS1-205ENST00000482013 SCLYQ96I15 445 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 C8orf48Q96LL4 319 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 GDAP1L1Q96MZ0 367 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 TMEM209Q96SK2 561 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 SH3GL2Q99962 352 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 TMEM39AQ9NV64 488 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 TMEM30AQ9NV96 361 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 ANAPC5Q9UJX4 755 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 AP4E1Q9UPM8 1137 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 PRG3Q9Y2Y8 225 aaPredicted RBP12.18□□□□□ -0.46
GGPS1-205ENST00000482013 PCDHB5Q9Y5E4 795 aa12.18□□□□□ -0.46
GGPS1-205ENST00000482013 VWA8A3KMH1 1905 aa12.17□□□□□ -0.46
GGPS1-205ENST00000482013 LTBP2Q14767 1821 aa12.17□□□□□ -0.46
GGPS1-205ENST00000482013 YJEFN3A6XGL0 299 aa12.17□□□□□ -0.46
GGPS1-205ENST00000482013 TBKBP1A7MCY6 615 aa12.17□□□□□ -0.46
GGPS1-205ENST00000482013 GOLGA8KD6RF30 607 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms