RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 SIRT3Q9NTG7 399 aaPredicted RBP8.58□□□□□ -1.04
LSM5-210ENST00000480956 PPP1R14DQ9NXH3 145 aa8.58□□□□□ -1.04
LSM5-210ENST00000480956 FTSJ1Q9UET6 329 aa8.58□□□□□ -1.04
LSM5-210ENST00000480956 CPSF3Q9UKF6 684 aaKnown RBP8.58□□□□□ -1.04
LSM5-210ENST00000480956 ZDHHC8Q9ULC8 765 aa8.58□□□□□ -1.04
LSM5-210ENST00000480956 RPTORQ8N122 1335 aa8.58□□□□□ -1.04
LSM5-210ENST00000480956 hCG_1809904A0A1W2PP81 198 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 A0A1W2PPE2 198 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 A0A1W2PR64 198 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 ZNF263O14978 683 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 SCAMP1O15126 338 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 TNFSF14O43557 240 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 LILRB5O75023 590 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 FDPSP14324 419 aaKnown RBP8.57□□□□□ -1.04
LSM5-210ENST00000480956 ENDOUP21128 410 aaKnown RBP8.57□□□□□ -1.04
LSM5-210ENST00000480956 KCNA5P22460 613 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 PER3P56645 1201 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 SGCGQ13326 291 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 ZNF484Q5JVG2 852 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 CRELD2Q6UXH1 353 aaPredicted RBP8.57□□□□□ -1.04
LSM5-210ENST00000480956 UBE3BQ7Z3V4 1068 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 HDDC3Q8N4P3 179 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 SMCR8Q8TEV9 937 aaPredicted RBP8.57□□□□□ -1.04
LSM5-210ENST00000480956 PRPF31Q8WWY3 499 aaKnown RBP8.57□□□□□ -1.04
LSM5-210ENST00000480956 CYFIP2Q96F07 1278 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 PERPQ96FX8 193 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 PDLIM5Q96HC4 596 aaKnown RBP8.57□□□□□ -1.04
LSM5-210ENST00000480956 GSDMAQ96QA5 445 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 PRAM1Q96QH2 718 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 TCHPQ9BT92 498 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 FOXP3Q9BZS1 431 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 ZNF70Q9UC06 446 aaPredicted RBP8.57□□□□□ -1.04
LSM5-210ENST00000480956 SARDHQ9UL12 918 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 A0A087WWL8 130 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.57□□□□□ -1.04
LSM5-210ENST00000480956 LRRD1A4D1F6 860 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 GLOD5A6NK44 160 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 SHISA8B8ZZ34 492 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 TULP3O75386 442 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 TMOD1P28289 359 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 POLGP54098 1239 aaPredicted RBP8.57□□□□□ -1.04
LSM5-210ENST00000480956 MRPS5P82675 430 aaKnown RBP8.57□□□□□ -1.04
LSM5-210ENST00000480956 DMTNQ08495 405 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 DCAF17Q5H9S7 520 aaPredicted RBP8.57□□□□□ -1.04
LSM5-210ENST00000480956 TTC39AQ5SRH9 613 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 FDX2Q6P4F2 183 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 TMEM154Q6P9G4 183 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 C20orf204Q6ZNR8 217 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 ANKRD44Q8N8A2 993 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 PLEKHO2Q8TD55 490 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 RBM17Q96I25 401 aaKnown RBP8.57□□□□□ -1.04
LSM5-210ENST00000480956 MAP6Q96JE9 813 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 HTATIP2Q9BUP3 242 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 GPR62Q9BZJ7 368 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 REXO4Q9GZR2 422 aaKnown RBP8.57□□□□□ -1.04
LSM5-210ENST00000480956 INTS2Q9H0H0 1204 aaKnown RBP8.57□□□□□ -1.04
LSM5-210ENST00000480956 LTB4R2Q9NPC1 389 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 ANO10Q9NW15 660 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 UCKL1Q9NWZ5 548 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 ZSCAN32Q9NX65 697 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 SIDT1Q9NXL6 827 aaKnown RBP8.57□□□□□ -1.04
LSM5-210ENST00000480956 EHD2Q9NZN4 543 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 LIPT1Q9Y234 373 aa8.57□□□□□ -1.04
LSM5-210ENST00000480956 CLRN2A0PK11 232 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 ARHGEF37A1IGU5 675 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 FAM90A20PA6NIJ5 464 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 MYO1CO00159 1063 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 BCAS2O75934 225 aaPredicted RBP8.56□□□□□ -1.04
LSM5-210ENST00000480956 BBOX1O75936 387 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 SASH1O94885 1247 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 HMOX1P09601 288 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 FERP16591 822 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 HOXB4P17483 251 aaPredicted RBP8.56□□□□□ -1.04
LSM5-210ENST00000480956 PIP4K2AP48426 406 aaPredicted RBP8.56□□□□□ -1.04
LSM5-210ENST00000480956 IFNAR2P48551 515 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 POU6F2P78424 691 aaPredicted RBP8.56□□□□□ -1.04
LSM5-210ENST00000480956 RCN2Q14257 317 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 EMC4Q5J8M3 183 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 ATXN7L2Q5T6C5 722 aaPredicted RBP8.56□□□□□ -1.04
LSM5-210ENST00000480956 DGAT2L7PQ6IED9 249 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 KLHL35Q6PF15 583 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 NCEH1Q6PIU2 408 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 SUSD1Q6UWL2 747 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 Q6ZVL8 140 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 RABEPKQ7Z6M1 372 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 ADCK1Q86TW2 530 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 DZIP1Q86YF9 867 aaKnown RBP8.56□□□□□ -1.04
LSM5-210ENST00000480956 ZGPATQ8N5A5 531 aaKnown RBP8.56□□□□□ -1.04
LSM5-210ENST00000480956 SYT2Q8N9I0 419 aaPredicted RBP8.56□□□□□ -1.04
LSM5-210ENST00000480956 C2CD4AQ8NCU7 369 aaPredicted RBP8.56□□□□□ -1.04
LSM5-210ENST00000480956 WDR60Q8WVS4 1066 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 MRPS27Q92552 414 aaKnown RBP8.56□□□□□ -1.04
LSM5-210ENST00000480956 GRAMD1AQ96CP6 724 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 CMTM3Q96MX0 182 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 RXFP1Q9HBX9 757 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.56□□□□□ -1.04
LSM5-210ENST00000480956 ZBTB40Q9NUA8 1239 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.56□□□□□ -1.04
LSM5-210ENST00000480956 GGA1Q9UJY5 639 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 CNTN6Q9UQ52 1028 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms