RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 SLC30A5Q8TAD4 765 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 FAM81AQ8TBF8 368 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 CYGBQ8WWM9 190 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 SHC3Q92529 594 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 SNX9Q9Y5X1 595 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 SF3B1O75533 1304 aaKnown RBP eCLIP6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 CCDC195A0A1B0GUA6 201 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 RBAK-RBAKDNI3L0D1 243 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 DDX3XO00571 662 aaKnown RBP eCLIP6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 XPO1O14980 1071 aaKnown RBP6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 LZTS3O60299 673 aaPredicted RBP6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 RPL26P61254 145 aaKnown RBP6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 ANGPTL8Q6UXH0 198 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 GADL1Q6ZQY3 521 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 GALNT4Q8N4A0 578 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 HELQQ8TDG4 1101 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 EXT2Q93063 718 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 KLHL25Q9H0H3 589 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 RGS18Q9NS28 235 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 ZNF446Q9NWS9 450 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 COMMD8Q9NX08 183 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 NINJ2Q9NZG7 142 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 LZTS1Q9Y250 596 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 TMX2Q9Y320 296 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 TNPO3Q9Y5L0 923 aaKnown RBP6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 NCANO14594 1321 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 ASTN2O75129 1339 aaPredicted RBP6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 SLIT1O75093 1534 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 CABYRO75952 493 aa6.34□□□□□ -1.4
PRPF4B-205ENST00000480058 SUPT7LO94864 414 aa6.34□□□□□ -1.4
PRPF4B-205ENST00000480058 CYP3A4P08684 503 aa6.34□□□□□ -1.4
PRPF4B-205ENST00000480058 TAF6P49848 677 aa6.34□□□□□ -1.4
PRPF4B-205ENST00000480058 CHN2P52757 468 aa6.34□□□□□ -1.4
PRPF4B-205ENST00000480058 BCAT1P54687 386 aa6.34□□□□□ -1.4
PRPF4B-205ENST00000480058 HIST2H2ACQ16777 129 aaPredicted RBP6.34□□□□□ -1.4
PRPF4B-205ENST00000480058 ZBTB41Q5SVQ8 909 aa6.34□□□□□ -1.4
PRPF4B-205ENST00000480058 HIST2H2AA3Q6FI13 130 aa6.34□□□□□ -1.4
PRPF4B-205ENST00000480058 TRAF7Q6Q0C0 670 aa6.34□□□□□ -1.4
PRPF4B-205ENST00000480058 DHDDSQ86SQ9 333 aa6.34□□□□□ -1.4
PRPF4B-205ENST00000480058 CCDC60Q8IWA6 550 aaPredicted RBP6.34□□□□□ -1.4
PRPF4B-205ENST00000480058 DEFB107AQ8IZN7 70 aa6.34□□□□□ -1.4
PRPF4B-205ENST00000480058 ACTRT2Q8TDY3 377 aa6.34□□□□□ -1.4
PRPF4B-205ENST00000480058 SPON2Q9BUD6 331 aa6.34□□□□□ -1.4
PRPF4B-205ENST00000480058 TBC1D10AQ9BXI6 508 aa6.34□□□□□ -1.4
PRPF4B-205ENST00000480058 WDR41Q9HAD4 459 aa6.34□□□□□ -1.4
PRPF4B-205ENST00000480058 TRPC7Q9HCX4 862 aa6.34□□□□□ -1.4
PRPF4B-205ENST00000480058 FRMPD4Q14CM0 1322 aa6.34□□□□□ -1.4
PRPF4B-205ENST00000480058 ASNA1O43681 348 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 ZCCHC18P0CG32 403 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 STAT5AP42229 794 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 CCT8P50990 548 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 KCNT1Q5JUK3 1230 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 ANKRD13AQ8IZ07 590 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 FBXW8Q8N3Y1 598 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 PHC3Q8NDX5 983 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 BORCS5Q969J3 196 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 HECW2Q9P2P5 1572 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 ADGRB3O60242 1522 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 PECAM1P16284 738 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 IL12AP29459 219 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 CD151P48509 253 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 KPNA1P52294 538 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 OSTNP61366 133 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 TUBA4AP68366 448 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 PTPN11Q06124 597 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 PTP4A2Q12974 167 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 NFIL3Q16649 462 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 LRRC36Q1X8D7 754 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 LRRC55Q6ZSA7 311 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 HES6Q96HZ4 224 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 FAXDC2Q96IV6 333 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 MAGEB10Q96LZ2 347 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 NMRAL1Q9HBL8 299 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 ALG13Q9NP73 1137 aaKnown RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 TBC1D13Q9NVG8 400 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 TMEM161AQ9NX61 479 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 CRNNQ9UBG3 495 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 LSM7Q9UK45 103 aaKnown RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 PSMD13Q9UNM6 376 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 ADGRA2Q96PE1 1338 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 UBA6A0AVT1 1052 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 MRASO14807 208 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 CHADO15335 359 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 MSH4O15457 936 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 NPM3O75607 178 aaKnown RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 MLNP12872 115 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 RRM2P31350 389 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 TSTA3Q13630 321 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 PCBP1Q15365 356 aaKnown RBP eCLIP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 ATP6AP1LQ52LC2 224 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 ZNF484Q5JVG2 852 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 CCDC103Q8IW40 242 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 TTC30BQ8N4P2 665 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 ZNF557Q8N988 423 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 SLC10A4Q96EP9 437 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 KLF6Q99612 283 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 MRIQ9BWK5 157 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 BBS2Q9BXC9 721 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 IL25Q9H293 177 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms