RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 SCLYQ96I15 445 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 CCDC114Q96M63 670 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 RNF157Q96PX1 679 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 SNRNP25Q9BV90 132 aaKnown RBP11.49□□□□□ -0.57
VTI1A-204ENST00000480057 MAK16Q9BXY0 300 aaKnown RBP11.49□□□□□ -0.57
VTI1A-204ENST00000480057 DPH5Q9H2P9 285 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 PCDH18Q9HCL0 1135 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 TMEM39AQ9NV64 488 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 TMLHEQ9NVH6 421 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 DNAJB4Q9UDY4 337 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 FAN1Q9Y2M0 1017 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 LTBP2Q14767 1821 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 HTTP42858 3142 aa11.49□□□□□ -0.57
VTI1A-204ENST00000480057 TBKBP1A7MCY6 615 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 TRIM66O15016 1216 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 KIAA0355O15063 1070 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 PPFIA2O75334 1257 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 LTFP02788 710 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 GALTP07902 379 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 FAM153BP0C7A2 387 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 ATF2P15336 505 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 BDNFP23560 247 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 KLRC2P26717 231 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 CYP2C18P33260 490 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 RPL21P46778 160 aaKnown RBP11.48□□□□□ -0.57
VTI1A-204ENST00000480057 CCL23P55773 120 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 ADCY2Q08462 1091 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 SCAPQ12770 1279 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 SNX1Q13596 522 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 TRADDQ15628 312 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 FAM153CQ494X1 144 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 DCAF6Q58WW2 860 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 CFAP58Q5T655 872 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 SLC9A4Q6AI14 798 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 SCYL2Q6P3W7 929 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 FUT10Q6P4F1 479 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 LRIG3Q6UXM1 1119 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 BHLHA9Q7RTU4 235 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 LRRTM3Q86VH5 581 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 DDX42Q86XP3 938 aaKnown RBP eCLIP11.48□□□□□ -0.57
VTI1A-204ENST00000480057 DNAJC5GQ8N7S2 189 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 C2orf15Q8WU43 125 aaKnown RBP11.48□□□□□ -0.57
VTI1A-204ENST00000480057 ACSF2Q96CM8 615 aaPredicted RBP11.48□□□□□ -0.57
VTI1A-204ENST00000480057 C8orf48Q96LL4 319 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 CEP295NLQ96MC4 621 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 KCNK16Q96T55 309 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 HINFPQ9BQA5 517 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 TXLNGYQ9BZA5 131 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 PPP1R12CQ9BZL4 782 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 NEUROG2Q9H2A3 272 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 PLEKHA4Q9H4M7 779 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 PCDH9Q9HC56 1237 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 COMMD8Q9NX08 183 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 MARCH5Q9NX47 278 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 ASIC3Q9UHC3 531 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 FAM153AQ9UHL3 310 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 PRG3Q9Y2Y8 225 aaPredicted RBP11.48□□□□□ -0.57
VTI1A-204ENST00000480057 SNX24Q9Y343 169 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 FNDC1Q4ZHG4 1894 aaPredicted RBP11.48□□□□□ -0.57
VTI1A-204ENST00000480057 SCN5AQ14524 2016 aa11.48□□□□□ -0.57
VTI1A-204ENST00000480057 CFAP69A5D8W1 941 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 GOLGA6BA6NDN3 693 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 F8W810 466 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 SMAPO00193 183 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 APOL1O14791 398 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 CAPN9O14815 690 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 MCF2LO15068 1137 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 OPA1O60313 960 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 TBC1D4O60343 1298 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 EFEMP2O95967 443 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 KRT14P02533 472 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 CD48P09326 243 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 IVDP26440 423 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 L1CAMP32004 1257 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 NR2C2P49116 596 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 NDUFV1P49821 464 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 CACNA2D1P54289 1103 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 C1QTNF8P60827 252 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 DEUP1Q05D60 604 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 SLMAPQ14BN4 828 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 NOMO1Q15155 1222 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 CTXN3Q4LDR2 81 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 HSP90B2PQ58FF3 399 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 ANKRD20A8PQ5CZ79 823 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 FAM171A1Q5VUB5 890 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 OTUD1Q5VV17 481 aaPredicted RBP11.47□□□□□ -0.57
VTI1A-204ENST00000480057 ANKS3Q6ZW76 656 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 GPRIN1Q7Z2K8 1008 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 TMC3Q7Z5M5 1100 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 IQCKQ8N0W5 287 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 ACTL9Q8TC94 416 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.47□□□□□ -0.57
VTI1A-204ENST00000480057 CALN1Q9BXU9 219 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 TRIM31Q9BZY9 425 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 TMEM30AQ9NV96 361 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 DNPEPQ9ULA0 475 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 FZD10Q9ULW2 581 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 AP4E1Q9UPM8 1137 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 ZNF148Q9UQR1 794 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 ATP11BQ9Y2G3 1177 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms