RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 KLK13Q9UKR3 277 aa12.71□□□□□ -0.37
GCA-208ENST00000479199 ANKRD11Q6UB99 2663 aaPredicted RBP12.7□□□□□ -0.38
GCA-208ENST00000479199 IGHV1OR15-9A0A0B4J2B8 117 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 A0A1W2PQF6 199 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 FAM92AA1XBS5 289 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 TMEM8BA6NDV4 472 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 NEDD8-MDP1E9PL57 170 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 AP5Z1O43299 807 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 TLR5O60602 858 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 EXOC3O60645 756 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 PPP6R2O75170 966 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 BEST1O76090 585 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 VNN1O95497 513 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 HOXB3P14651 431 aaPredicted RBP12.7□□□□□ -0.38
GCA-208ENST00000479199 NDUFV2P19404 249 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 DPP6P42658 865 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 SNRPFP62306 86 aaKnown RBP12.7□□□□□ -0.38
GCA-208ENST00000479199 SIM1P81133 766 aaPredicted RBP12.7□□□□□ -0.38
GCA-208ENST00000479199 AMPD3Q01432 767 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 SEMA3BQ13214 749 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 NCOA4Q13772 614 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 DUOXA1Q1HG43 343 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 SPDYCQ5MJ68 293 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 GRAMD4Q6IC98 578 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 TOGARAM2Q6ZUX3 1019 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 GPRIN1Q7Z2K8 1008 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 TRMT11Q7Z4G4 463 aaKnown RBP12.7□□□□□ -0.38
GCA-208ENST00000479199 PIP4P1Q86T03 277 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 SLC41A1Q8IVJ1 513 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 C12orf56Q8IXR9 622 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 IQUBQ8NA54 791 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 SMOQ99835 787 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 SLC6A17Q9H1V8 727 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 SLC32A1Q9H598 525 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 VRTNQ9H8Y1 702 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 CAPN10Q9HC96 672 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 FAM49BQ9NUQ9 324 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 SLC6A14Q9UN76 642 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 CYP8B1Q9UNU6 501 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 RAD54BQ9Y620 910 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 WDFY3Q8IZQ1 3526 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 ADAMTS20P59510 1910 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 KNL1Q8NG31 2342 aa12.7□□□□□ -0.38
GCA-208ENST00000479199 DMXL2Q8TDJ6 3036 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 SRRM3A6NNA2 597 aaPredicted RBP12.69□□□□□ -0.38
GCA-208ENST00000479199 CACNG3O60359 315 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 GREM1O60565 184 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 CUTAO60888 179 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 TBX18O95935 607 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 NTSR1P30989 418 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 HOXD12P35452 270 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 ATXN3P54252 364 aaPredicted RBP12.69□□□□□ -0.38
GCA-208ENST00000479199 MAP3K7CLP57077 242 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 FAM193AP78312 1265 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 ZNF33AQ06730 810 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 CUL4BQ13620 913 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 FOXD4L5Q5VV16 416 aaPredicted RBP12.69□□□□□ -0.38
GCA-208ENST00000479199 SLC36A4Q6YBV0 504 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 GRAMD1CQ8IYS0 662 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 CHPFQ8IZ52 775 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 HDDC3Q8N4P3 179 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 MINDY1Q8N5J2 469 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 SLC2A14Q8TDB8 520 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 KCNV2Q8TDN2 545 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 FOXD4L4Q8WXT5 416 aaPredicted RBP12.69□□□□□ -0.38
GCA-208ENST00000479199 JAKMIP2Q96AA8 810 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 INTS4Q96HW7 963 aaKnown RBP12.69□□□□□ -0.38
GCA-208ENST00000479199 TNIP3Q96KP6 325 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 HSPA12BQ96MM6 686 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 DUSP9Q99956 384 aaKnown RBP12.69□□□□□ -0.38
GCA-208ENST00000479199 BBS2Q9BXC9 721 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 CD248Q9HCU0 757 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 NEUROG3Q9Y4Z2 214 aa12.69□□□□□ -0.38
GCA-208ENST00000479199 MUC22E2RYF6 1773 aaPredicted RBP12.69□□□□□ -0.38
GCA-208ENST00000479199 ACACAQ13085 2346 aa12.68□□□□□ -0.38
GCA-208ENST00000479199 CABIN1Q9Y6J0 2220 aa12.68□□□□□ -0.38
GCA-208ENST00000479199 PRRT4C9JH25 899 aa12.68□□□□□ -0.38
GCA-208ENST00000479199 MDM4O15151 490 aa12.68□□□□□ -0.38
GCA-208ENST00000479199 POLR2DO15514 142 aaKnown RBP12.68□□□□□ -0.38
GCA-208ENST00000479199 CYP26A1O43174 497 aa12.68□□□□□ -0.38
GCA-208ENST00000479199 OPHN1O60890 802 aa12.68□□□□□ -0.38
GCA-208ENST00000479199 YEATS4O95619 227 aa12.68□□□□□ -0.38
GCA-208ENST00000479199 C4BPAP04003 597 aaKnown RBP12.68□□□□□ -0.38
GCA-208ENST00000479199 SERPINF2P08697 491 aa12.68□□□□□ -0.38
GCA-208ENST00000479199 TYRP14679 529 aa12.68□□□□□ -0.38
GCA-208ENST00000479199 ADORA2BP29275 332 aa12.68□□□□□ -0.38
GCA-208ENST00000479199 AFMP43652 599 aa12.68□□□□□ -0.38
GCA-208ENST00000479199 NDST1P52848 882 aa12.68□□□□□ -0.38
GCA-208ENST00000479199 DLG4P78352 724 aa12.68□□□□□ -0.38
GCA-208ENST00000479199 GFPT1Q06210 699 aaPredicted RBP12.68□□□□□ -0.38
GCA-208ENST00000479199 KNOP1Q1ED39 458 aaKnown RBP12.68□□□□□ -0.38
GCA-208ENST00000479199 PREPLQ4J6C6 727 aaPredicted RBP12.68□□□□□ -0.38
GCA-208ENST00000479199 SPOPLQ6IQ16 392 aa12.68□□□□□ -0.38
GCA-208ENST00000479199 TPGS1Q6ZTW0 290 aa12.68□□□□□ -0.38
GCA-208ENST00000479199 TRIML1Q8N9V2 468 aa12.68□□□□□ -0.38
GCA-208ENST00000479199 CEP76Q8TAP6 659 aa12.68□□□□□ -0.38
GCA-208ENST00000479199 PARD3BQ8TEW8 1205 aa12.68□□□□□ -0.38
GCA-208ENST00000479199 IPO4Q8TEX9 1081 aaKnown RBP12.68□□□□□ -0.38
GCA-208ENST00000479199 BHMTQ93088 406 aa12.68□□□□□ -0.38
GCA-208ENST00000479199 KLF16Q9BXK1 252 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms