RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 EDEM1Q92611 657 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 FAM149B1Q96BN6 582 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 C1QTNF1Q9BXJ1 281 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 EBF3Q9H4W6 596 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 CNGB3Q9NQW8 809 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 SEPT11Q9NVA2 429 aaKnown RBP7.24□□□□□ -1.25
BRCA1-215ENST00000478531 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.24□□□□□ -1.25
BRCA1-215ENST00000478531 OBP2AQ9NY56 170 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 GTSE1Q9NYZ3 720 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 CFAP97Q9P2B7 532 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 TJP2Q9UDY2 1190 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 RASAL2Q9UJF2 1139 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 PCDHGC3Q9UN70 934 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 WNT6Q9Y6F9 365 aa7.24□□□□□ -1.25
BRCA1-215ENST00000478531 A0A1W2PQC6 194 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 KRBA1A5PL33 1030 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 LRRC53A6NM62 1247 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 CHADO15335 359 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 GABBR2O75899 941 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 FBXO21O94952 628 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 OLFM2O95897 454 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 TPM3P06753 285 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 MMEP08473 750 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 ARSAP15289 507 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 PFKLP17858 780 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 CD72P21854 359 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 ATP5C1P36542 298 aaKnown RBP7.23□□□□□ -1.25
BRCA1-215ENST00000478531 SOX9P48436 509 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 IFNAR2P48551 515 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 PSEN1P49768 467 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 KPNA1P52294 538 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-215ENST00000478531 DAOAP59103 153 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 NR1I3Q14994 352 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 MLF2Q15773 248 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-215ENST00000478531 MEA1Q16626 185 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 PM20D1Q6GTS8 502 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 TPRG1Q6ZUI0 275 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 BHLHA9Q7RTU4 235 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 TADA2BQ86TJ2 420 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 SCUBE3Q8IX30 993 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 GOLGA1Q92805 767 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 PBXIP1Q96AQ6 731 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 PPP1R13BQ96KQ4 1090 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 ZFRQ96KR1 1074 aaKnown RBP7.23□□□□□ -1.25
BRCA1-215ENST00000478531 HSFY1Q96LI6 401 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 NOX5Q96PH1 765 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 CPXM1Q96SM3 734 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 CDK5RAP1Q96SZ6 601 aaKnown RBP7.23□□□□□ -1.25
BRCA1-215ENST00000478531 XPO4Q9C0E2 1151 aaKnown RBP7.23□□□□□ -1.25
BRCA1-215ENST00000478531 TBC1D17Q9HA65 648 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 CYLDQ9NQC7 956 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 GKN1Q9NS71 199 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 DUS2Q9NX74 493 aaKnown RBP7.23□□□□□ -1.25
BRCA1-215ENST00000478531 WNT16Q9UBV4 365 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 DNMT3LQ9UJW3 386 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 SH3BP1Q9Y3L3 701 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 DAAM1Q9Y4D1 1078 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 PIAS3Q9Y6X2 628 aa7.23□□□□□ -1.25
BRCA1-215ENST00000478531 ARNTLO00327 626 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 LTFP02788 710 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 ACADSBP45954 432 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 GOLGA8FQ08AF8 430 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 GOLGA8DPQ0D2H9 430 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 SLC44A4Q53GD3 710 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 C2CD6Q53TS8 623 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 NAA35Q5VZE5 725 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 BSPRYQ5W0U4 402 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 DDX42Q86XP3 938 aaKnown RBP eCLIP7.22□□□□□ -1.25
BRCA1-215ENST00000478531 WDTC1Q8N5D0 677 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 TMEM35BQ8NCS4 154 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 IPO4Q8TEX9 1081 aaKnown RBP7.22□□□□□ -1.25
BRCA1-215ENST00000478531 RNF139Q8WU17 664 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 OSCP1Q8WVF1 389 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 CPA5Q8WXQ8 436 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 DDX1Q92499 740 aaKnown RBP7.22□□□□□ -1.25
BRCA1-215ENST00000478531 DNASE1L2Q92874 299 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 PIWIL1Q96J94 861 aaKnown RBP7.22□□□□□ -1.25
BRCA1-215ENST00000478531 FOXQ1Q9C009 403 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 CLIC5Q9NZA1 410 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 NOCTQ9UK39 431 aaKnown RBP7.22□□□□□ -1.25
BRCA1-215ENST00000478531 KIAA1549LQ6ZVL6 1849 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 USP34Q70CQ2 3546 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 PAPSS1O43252 624 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-215ENST00000478531 MSI1O43347 362 aaKnown RBP7.22□□□□□ -1.25
BRCA1-215ENST00000478531 CBFA2T2O43439 604 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 GPR37L1O60883 481 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 GRAP2O75791 330 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 ERBB2P04626 1255 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 NCAM1P13591 858 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 FMO1Q01740 532 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 CDR2Q01850 454 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 UBXN2BQ14CS0 331 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 ASIC2Q16515 512 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 ITPRIPL2Q3MIP1 535 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 PTPN20Q4JDL3 420 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 OR6B2Q6IFH4 312 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 FAM183BPQ6ZVS7 135 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 FMNL3Q8IVF7 1028 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 SUGP1Q8IWZ8 645 aaKnown RBP7.22□□□□□ -1.25
BRCA1-215ENST00000478531 STK32AQ8WU08 396 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms