RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 MS4A7Q9GZW8 240 aaPredicted RBP4.06□□□□□ -1.76
NCKAP1-204ENST00000477988 PCDHA12Q9UN75 941 aa4.06□□□□□ -1.76
NCKAP1-204ENST00000477988 STXBP5LQ9Y2K9 1186 aa4.06□□□□□ -1.76
NCKAP1-204ENST00000477988 SPATA31A1Q5TZJ5 1347 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 NDUFB8O95169 186 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 PLAUP00749 431 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 AKAP5P24588 427 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 ARRB2P32121 409 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 KCNJ4P48050 445 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 POLD2P49005 469 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 ARFIP2P53365 341 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 SLC12A2P55011 1212 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 TMEM240Q5SV17 173 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 GIMAP6Q6P9H5 292 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 ZNF783Q6ZMS7 281 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 SLC44A5Q8NCS7 719 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 NUDCD2Q8WVJ2 157 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 TRMT61AQ96FX7 289 aaKnown RBP4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 WDYHV1Q96HA8 205 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 LMLNQ96KR4 655 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 MYLK2Q9H1R3 596 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 CPA4Q9UI42 421 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 FZD4Q9ULV1 537 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 PCDHA7Q9UN72 937 aa4.05□□□□□ -1.76
NCKAP1-204ENST00000477988 A8MVJ9 347 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 F8W810 466 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 ZC3H11AO75152 810 aaKnown RBP eCLIP4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 HOXB2P14652 356 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 CTBP1Q13363 440 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 KEAP1Q14145 624 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 FGL2Q14314 439 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 NFATC4Q14934 902 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 CATIPQ7Z7H3 387 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 SKAP1Q86WV1 359 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 PNPLA1Q8N8W4 532 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 DNAJB14Q8TBM8 379 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 MIB2Q96AX9 1013 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 MED30Q96HR3 178 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 P2RX7Q99572 595 aaKnown RBP4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 SCNM1Q9BWG6 230 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 TRIM54Q9BYV2 358 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 GTPBP4Q9BZE4 634 aaKnown RBP4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 DPH1Q9BZG8 443 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 NUAK2Q9H093 628 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 CD93Q9NPY3 652 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 SEMA5BQ9P283 1151 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 NKX1-2Q9UD57 310 aaPredicted RBP4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 ERRFI1Q9UJM3 462 aaPredicted RBP4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 PAXBP1Q9Y5B6 917 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 CDY1Q9Y6F8 540 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 EVPLQ92817 2033 aa4.04□□□□□ -1.76
NCKAP1-204ENST00000477988 A0A088AWK7 358 aa4.03□□□□□ -1.76
NCKAP1-204ENST00000477988 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.03□□□□□ -1.76
NCKAP1-204ENST00000477988 TMEM272A0A1B0GTI8 110 aa4.03□□□□□ -1.76
NCKAP1-204ENST00000477988 FYB1O15117 783 aa4.03□□□□□ -1.76
NCKAP1-204ENST00000477988 CD3EAPO15446 510 aaKnown RBP4.03□□□□□ -1.76
NCKAP1-204ENST00000477988 KATNA1O75449 491 aa4.03□□□□□ -1.76
NCKAP1-204ENST00000477988 SNUPNO95149 360 aaKnown RBP4.03□□□□□ -1.76
NCKAP1-204ENST00000477988 CD19P15391 556 aa4.03□□□□□ -1.76
NCKAP1-204ENST00000477988 CDK11BP21127 795 aaKnown RBP4.03□□□□□ -1.76
NCKAP1-204ENST00000477988 P2RX3P56373 397 aa4.03□□□□□ -1.76
NCKAP1-204ENST00000477988 INSCQ1MX18 579 aa4.03□□□□□ -1.76
NCKAP1-204ENST00000477988 OR6B3Q8NGW1 331 aa4.03□□□□□ -1.76
NCKAP1-204ENST00000477988 RAPGEF4Q8WZA2 1011 aa4.03□□□□□ -1.76
NCKAP1-204ENST00000477988 P2RY11Q96G91 374 aa4.03□□□□□ -1.76
NCKAP1-204ENST00000477988 TM2D2Q9BX73 214 aa4.03□□□□□ -1.76
NCKAP1-204ENST00000477988 COG5Q9UP83 839 aa4.03□□□□□ -1.76
NCKAP1-204ENST00000477988 ALG1L2C9J202 215 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 EXOC5O00471 708 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 BTN3A1O00481 513 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 SRGAP2O75044 1071 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 VCAM1P19320 739 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 MCM5P33992 734 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 GAS1P54826 345 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 GPC5P78333 572 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 RPL36AP83881 106 aaKnown RBP4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 EGR4Q05215 589 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 LTBQ06643 244 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 RAB32Q13637 225 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 KPNB1Q14974 876 aaKnown RBP4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 ST3GAL2Q16842 350 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 KRT71Q3SY84 523 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 NPNTQ6UXI9 565 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 TRAPPC11Q7Z392 1133 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 NR2C2APQ86WQ0 139 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 CHPFQ8IZ52 775 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 PLBD2Q8NHP8 589 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 FCRL5Q96RD9 977 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 CGRRF1Q99675 332 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 ARMT1Q9H993 441 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 SPC25Q9HBM1 224 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 FZD3Q9NPG1 666 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 PAPOLBQ9NRJ5 636 aaKnown RBP4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 ARL8BQ9NVJ2 186 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 MSRB1Q9NZV6 116 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 DNMT3BQ9UBC3 853 aaKnown RBP4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 WNT16Q9UBV4 365 aa4.02□□□□□ -1.77
NCKAP1-204ENST00000477988 TRBV5-3A0A0A0MS03 114 aa4.01□□□□□ -1.77
NCKAP1-204ENST00000477988 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms