RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 HPDLQ96IR7 371 aa18.79■□□□□ 0.6
CCM2-209ENST00000477605 C12orf65Q9H3J6 166 aaKnown RBP18.79■□□□□ 0.6
CCM2-209ENST00000477605 POPDC2Q9HBU9 364 aa18.79■□□□□ 0.6
CCM2-209ENST00000477605 NUMBLQ9Y6R0 609 aa18.79■□□□□ 0.6
CCM2-209ENST00000477605 KCNN4O15554 427 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 PIAS1O75925 651 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 SMNDC1O75940 238 aaKnown RBP eCLIP18.78■□□□□ 0.6
CCM2-209ENST00000477605 KRT38O76015 456 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 ARIH2O95376 493 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 ZBED1O96006 694 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 SERPINB3P29508 390 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 RBP5P82980 135 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 DBN1Q16643 649 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 TREML2Q5T2D2 321 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 TRIM50Q86XT4 487 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 CDKL3Q8IVW4 592 aaPredicted RBP18.78■□□□□ 0.6
CCM2-209ENST00000477605 APLFQ8IW19 511 aaPredicted RBP18.78■□□□□ 0.6
CCM2-209ENST00000477605 DHX37Q8IY37 1157 aaKnown RBP18.78■□□□□ 0.6
CCM2-209ENST00000477605 TMEM192Q8IY95 271 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 KCNV2Q8TDN2 545 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 SPATA33Q96N06 139 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 ZNF670Q9BS34 389 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 ETNK2Q9NVF9 386 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 MDM4O15151 490 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 ESRRAP11474 423 aaPredicted RBP18.78■□□□□ 0.6
CCM2-209ENST00000477605 IL4RP24394 825 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 SERPINB9P50453 376 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 ORC1Q13415 861 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 ZNF484Q5JVG2 852 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 C1orf228Q6PIY5 440 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 FAM183BPQ6ZVS7 135 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 CYS1Q717R9 158 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 VPS52Q8N1B4 723 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 PPM1NQ8N819 430 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 ALG13Q9NP73 1137 aaKnown RBP18.78■□□□□ 0.6
CCM2-209ENST00000477605 GPRC5DQ9NZD1 345 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 C2CD2Q9Y426 696 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 A0A0G2JMZ2 1700 aa18.78■□□□□ 0.6
CCM2-209ENST00000477605 ENTPD5O75356 428 aa18.77■□□□□ 0.6
CCM2-209ENST00000477605 USP2O75604 605 aaPredicted RBP18.77■□□□□ 0.6
CCM2-209ENST00000477605 APOEP02649 317 aa18.77■□□□□ 0.6
CCM2-209ENST00000477605 ZFXP17010 805 aaPredicted RBP18.77■□□□□ 0.6
CCM2-209ENST00000477605 PTDSS1P48651 473 aaKnown RBP18.77■□□□□ 0.6
CCM2-209ENST00000477605 CCDC14Q49A88 953 aa18.77■□□□□ 0.6
CCM2-209ENST00000477605 TRNP1Q6NT89 227 aa18.77■□□□□ 0.6
CCM2-209ENST00000477605 PRPF39Q86UA1 669 aaKnown RBP18.77■□□□□ 0.6
CCM2-209ENST00000477605 CAND1Q86VP6 1230 aaKnown RBP18.77■□□□□ 0.6
CCM2-209ENST00000477605 CTAGE3PQ8IX95 158 aa18.77■□□□□ 0.6
CCM2-209ENST00000477605 PQLC3Q8N755 202 aa18.77■□□□□ 0.6
CCM2-209ENST00000477605 TTC8Q8TAM2 541 aa18.77■□□□□ 0.6
CCM2-209ENST00000477605 UBA3Q8TBC4 463 aa18.77■□□□□ 0.6
CCM2-209ENST00000477605 MCUR1Q96AQ8 359 aa18.77■□□□□ 0.6
CCM2-209ENST00000477605 CFAP36Q96G28 342 aa18.77■□□□□ 0.6
CCM2-209ENST00000477605 NT5C1AQ9BXI3 368 aa18.77■□□□□ 0.6
CCM2-209ENST00000477605 MINDY3Q9H8M7 445 aa18.77■□□□□ 0.6
CCM2-209ENST00000477605 PCDH18Q9HCL0 1135 aa18.77■□□□□ 0.6
CCM2-209ENST00000477605 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.77■□□□□ 0.6
CCM2-209ENST00000477605 SIRPGQ9P1W8 387 aa18.77■□□□□ 0.6
CCM2-209ENST00000477605 A8MXQ7 604 aa18.77■□□□□ 0.59
CCM2-209ENST00000477605 BIRC5O15392 142 aa18.77■□□□□ 0.59
CCM2-209ENST00000477605 MYL2P10916 166 aa18.77■□□□□ 0.59
CCM2-209ENST00000477605 TPSB2P20231 275 aa18.77■□□□□ 0.59
CCM2-209ENST00000477605 MAGEA3P43357 314 aa18.77■□□□□ 0.59
CCM2-209ENST00000477605 NDST1P52848 882 aa18.77■□□□□ 0.59
CCM2-209ENST00000477605 TMEM132DQ14C87 1099 aa18.77■□□□□ 0.59
CCM2-209ENST00000477605 TPSAB1Q15661 275 aa18.77■□□□□ 0.59
CCM2-209ENST00000477605 ZRSR2Q15696 482 aaKnown RBP18.77■□□□□ 0.59
CCM2-209ENST00000477605 TBCCQ15814 346 aa18.77■□□□□ 0.59
CCM2-209ENST00000477605 SH3PXD2AQ5TCZ1 1133 aa18.77■□□□□ 0.59
CCM2-209ENST00000477605 MAP1SQ66K74 1059 aaPredicted RBP18.77■□□□□ 0.59
CCM2-209ENST00000477605 EEPD1Q7L9B9 569 aa18.77■□□□□ 0.59
CCM2-209ENST00000477605 ZDHHC17Q8IUH5 632 aa18.77■□□□□ 0.59
CCM2-209ENST00000477605 GCOM2Q9BZD3 368 aaPredicted RBP18.77■□□□□ 0.59
CCM2-209ENST00000477605 TSPAN16Q9UKR8 245 aa18.77■□□□□ 0.59
CCM2-209ENST00000477605 CLEC11AQ9Y240 323 aa18.77■□□□□ 0.59
CCM2-209ENST00000477605 A6NHS1 94 aa18.76■□□□□ 0.59
CCM2-209ENST00000477605 E5RJQ4 531 aa18.76■□□□□ 0.59
CCM2-209ENST00000477605 FCHO1O14526 889 aa18.76■□□□□ 0.59
CCM2-209ENST00000477605 GCATO75600 419 aa18.76■□□□□ 0.59
CCM2-209ENST00000477605 RARBP10826 455 aa18.76■□□□□ 0.59
CCM2-209ENST00000477605 CNTFP26441 200 aa18.76■□□□□ 0.59
CCM2-209ENST00000477605 RBL1P28749 1068 aa18.76■□□□□ 0.59
CCM2-209ENST00000477605 VHLP40337 213 aa18.76■□□□□ 0.59
CCM2-209ENST00000477605 MTM1Q13496 603 aa18.76■□□□□ 0.59
CCM2-209ENST00000477605 AMHR2Q16671 573 aa18.76■□□□□ 0.59
CCM2-209ENST00000477605 C15orf59Q2T9L4 293 aaPredicted RBP18.76■□□□□ 0.59
CCM2-209ENST00000477605 TIFABQ6ZNK6 161 aa18.76■□□□□ 0.59
CCM2-209ENST00000477605 CDR2LQ86X02 465 aaPredicted RBP18.76■□□□□ 0.59
CCM2-209ENST00000477605 DNAJC9Q8WXX5 260 aa18.76■□□□□ 0.59
CCM2-209ENST00000477605 E2F7Q96AV8 911 aa18.76■□□□□ 0.59
CCM2-209ENST00000477605 SLC15A5A6NIM6 579 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 IRF6O14896 467 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 MAGEC1O60732 1142 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 AVILO75366 819 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 RFPL1O75677 317 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 C22orf31O95567 290 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 SDC4P31431 198 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 NR2C2P49116 596 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 CLCN3P51790 818 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 NRLP54845 237 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms