RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 PIWIL2Q8TC59 973 aaKnown RBP14.31□□□□□ -0.12
HDAC1-206ENST00000476391 APBB2Q92870 758 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 TAMM41Q96BW9 452 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 TRIM11Q96F44 468 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 SH3GL1Q99961 368 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 FERMT1Q9BQL6 677 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 AGPAT3Q9NRZ7 376 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 MKS1Q9NXB0 559 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 PCDHB2Q9Y5E7 798 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 SCN7AQ01118 1682 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 A0A087WXM4 84 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 TRIM64BA6NI03 449 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 FOXD2O60548 495 aaPredicted RBP14.31□□□□□ -0.12
HDAC1-206ENST00000476391 PIAS1O75925 651 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 CYP2J2P51589 502 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 KPNA1P52294 538 aaPredicted RBP14.31□□□□□ -0.12
HDAC1-206ENST00000476391 DLG4P78352 724 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 CD300CQ08708 224 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 TRIM16LQ309B1 348 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 CAVIN4Q5BKX8 364 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 KRT80Q6KB66 452 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 EEPD1Q7L9B9 569 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 RHPN2Q8IUC4 686 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 SLC9A9Q8IVB4 645 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 PPIL6Q8IXY8 311 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 ZNF597Q96LX8 424 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 COPS7BQ9H9Q2 264 aaPredicted RBP14.31□□□□□ -0.12
HDAC1-206ENST00000476391 OLAHQ9NV23 265 aa14.31□□□□□ -0.12
HDAC1-206ENST00000476391 PTBP2Q9UKA9 531 aaKnown RBP14.31□□□□□ -0.12
HDAC1-206ENST00000476391 PRSS51A0A1B0GVH4 220 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 TNFRSF10AO00220 468 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 ATE1O95260 518 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 ZNF26P17031 533 aaPredicted RBP14.3□□□□□ -0.12
HDAC1-206ENST00000476391 HNRNPFP52597 415 aaKnown RBP14.3□□□□□ -0.12
HDAC1-206ENST00000476391 DPYSQ14117 519 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 XKR5Q6UX68 686 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 FRMD7Q6ZUT3 714 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 STXBP4Q6ZWJ1 553 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 LILRA2Q8N149 483 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.3□□□□□ -0.12
HDAC1-206ENST00000476391 TFB1MQ8WVM0 346 aaKnown RBP14.3□□□□□ -0.12
HDAC1-206ENST00000476391 CCDC127Q96BQ5 260 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 C20orf27Q9GZN8 174 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 RPF2Q9H7B2 306 aaKnown RBP14.3□□□□□ -0.12
HDAC1-206ENST00000476391 ZNF395Q9H8N7 513 aaPredicted RBP14.3□□□□□ -0.12
HDAC1-206ENST00000476391 XAB2Q9HCS7 855 aaKnown RBP14.3□□□□□ -0.12
HDAC1-206ENST00000476391 QPCTLQ9NXS2 382 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 IFT52Q9Y366 437 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 ZNF536O15090 1300 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 GOLGA8SH3BPF8 625 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 GOLGA8MH3BSY2 632 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 ITGAVP06756 1048 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 SPATA31C1P0DKV0 1188 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 STAT3P40763 770 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 MRPS22P82650 360 aaKnown RBP14.3□□□□□ -0.12
HDAC1-206ENST00000476391 CTBSQ01459 385 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 DMPKQ09013 629 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 COG2Q14746 738 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 MSS51Q4VC12 460 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 FNBP1LQ5T0N5 605 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 TTC39BQ5VTQ0 682 aaPredicted RBP14.3□□□□□ -0.12
HDAC1-206ENST00000476391 SHC3Q92529 594 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 WDR83Q9BRX9 315 aaKnown RBP14.3□□□□□ -0.12
HDAC1-206ENST00000476391 RTKNQ9BST9 563 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 TMEM117Q9H0C3 514 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 IKZF4Q9H2S9 585 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 DHX33Q9H6R0 707 aaKnown RBP14.3□□□□□ -0.12
HDAC1-206ENST00000476391 IFT122Q9HBG6 1241 aa14.3□□□□□ -0.12
HDAC1-206ENST00000476391 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.3□□□□□ -0.12
HDAC1-206ENST00000476391 COL18A1P39060 1754 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 ANKRD34BA5PLL1 514 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 MEIS1O00470 390 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 GIPC1O14908 333 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 STARD3NLO95772 234 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 HSD17B4P51659 736 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 SPIRE1Q08AE8 756 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 FLOT2Q14254 428 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 OXA1LQ15070 435 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 UBE2SQ16763 222 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 LYSMD3Q7Z3D4 306 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 KCTD17Q8N5Z5 321 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 ZCRB1Q8TBF4 217 aaKnown RBP14.29□□□□□ -0.12
HDAC1-206ENST00000476391 HELQQ8TDG4 1101 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 CABLES1Q8TDN4 633 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 ZNF641Q96N77 438 aaPredicted RBP14.29□□□□□ -0.12
HDAC1-206ENST00000476391 PKP2Q99959 881 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 GINM1Q9NU53 330 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.29□□□□□ -0.12
HDAC1-206ENST00000476391 H3BMQ9 156 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 FAM13AO94988 1023 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 BPGMP07738 259 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 HSPA8P11142 646 aaKnown RBP14.29□□□□□ -0.12
HDAC1-206ENST00000476391 DCKP27707 260 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 NMT1P30419 496 aaKnown RBP14.29□□□□□ -0.12
HDAC1-206ENST00000476391 NFX1Q12986 1120 aaKnown RBP14.29□□□□□ -0.12
HDAC1-206ENST00000476391 VASH1Q7L8A9 365 aaPredicted RBP14.29□□□□□ -0.12
HDAC1-206ENST00000476391 ITIH5Q86UX2 942 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 ZNF354CQ86Y25 554 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 MCF2L2Q86YR7 1114 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 EFCAB3Q8N7B9 438 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms