RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 RPN1P04843 607 aaKnown RBP11.45□□□□□ -0.58
CDRT1-205ENST00000475944 PDIA4P13667 645 aaKnown RBP11.45□□□□□ -0.58
CDRT1-205ENST00000475944 CCDC130P13994 396 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 GABRG2P18507 467 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 SPINK2P20155 84 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 ATP5C1P36542 298 aaKnown RBP11.45□□□□□ -0.58
CDRT1-205ENST00000475944 MAP3K7CLP57077 242 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 GFPT1Q06210 699 aaPredicted RBP11.45□□□□□ -0.58
CDRT1-205ENST00000475944 CUL4BQ13620 913 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 SGSM1Q2NKQ1 1148 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 UNC93AQ86WB7 457 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 SLC9A9Q8IVB4 645 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 CEP57L1Q8IYX8 460 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 CHPFQ8IZ52 775 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 CRYBG2Q8N1P7 616 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 HDDC3Q8N4P3 179 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 KDF1Q8NAX2 398 aaPredicted RBP11.45□□□□□ -0.58
CDRT1-205ENST00000475944 ZMIZ2Q8NF64 920 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 SLC2A14Q8TDB8 520 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 TAF4BQ92750 862 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 SMOQ99835 787 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 SCNM1Q9BWG6 230 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 BBS2Q9BXC9 721 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.45□□□□□ -0.58
CDRT1-205ENST00000475944 EXOC1Q9NV70 894 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 CALCOCO1Q9P1Z2 691 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 WDR35Q9P2L0 1181 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 SLC6A14Q9UN76 642 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 MYOFQ9NZM1 2061 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 BEST1O76090 585 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 TOP3BO95985 862 aaKnown RBP11.44□□□□□ -0.58
CDRT1-205ENST00000475944 SERPINF2P08697 491 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 FAM200BP0CF97 657 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 TYRP14679 529 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 WASP42768 502 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 ME1P48163 572 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 NDST1P52848 882 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 ZNF33AQ06730 810 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 SEMA3BQ13214 749 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 ZACNQ401N2 412 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 RESP18Q5W5W9 173 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 EGFLAMQ63HQ2 1017 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 TPGS1Q6ZTW0 290 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 TMC2Q8TDI7 906 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 TMEM174Q8WUU8 243 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 WBP2Q969T9 261 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 ELMO3Q96BJ8 720 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 GTPBP2Q9BX10 602 aaKnown RBP11.44□□□□□ -0.58
CDRT1-205ENST00000475944 KLF16Q9BXK1 252 aaPredicted RBP11.44□□□□□ -0.58
CDRT1-205ENST00000475944 TMEM121BQ9BXQ6 578 aaPredicted RBP11.44□□□□□ -0.58
CDRT1-205ENST00000475944 CYLDQ9NQC7 956 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 FAM49BQ9NUQ9 324 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 DMAC2Q9NW81 257 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 MARK1Q9P0L2 795 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 SCML2Q9UQR0 700 aa11.44□□□□□ -0.58
CDRT1-205ENST00000475944 IGHV1OR15-9A0A0B4J2B8 117 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 A0A1W2PQF6 199 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 GFRA2O00451 464 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 PDXKO00764 312 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 IKBKBO14920 756 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 TRIM24O15164 1050 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 GREM1O60565 184 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 OPHN1O60890 802 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 TBX18O95935 607 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 ASS1P00966 412 aaKnown RBP11.43□□□□□ -0.58
CDRT1-205ENST00000475944 NDUFV2P19404 249 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 ADORA2BP29275 332 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 RDXP35241 583 aaKnown RBP11.43□□□□□ -0.58
CDRT1-205ENST00000475944 PIK3CAP42336 1068 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 DLG4P78352 724 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 SIM1P81133 766 aaPredicted RBP11.43□□□□□ -0.58
CDRT1-205ENST00000475944 ORC1Q13415 861 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 FOXD4L6Q3SYB3 417 aaPredicted RBP11.43□□□□□ -0.58
CDRT1-205ENST00000475944 FOXD4L5Q5VV16 416 aaPredicted RBP11.43□□□□□ -0.58
CDRT1-205ENST00000475944 ATL3Q6DD88 541 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 FOXD4L3Q6VB84 417 aaPredicted RBP11.43□□□□□ -0.58
CDRT1-205ENST00000475944 SV2AQ7L0J3 742 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 PIP4P1Q86T03 277 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 MIB1Q86YT6 1006 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 DEFB119Q8N690 84 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 C12orf29Q8N999 325 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 KIAA0895Q8NCT3 520 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 IPO4Q8TEX9 1081 aaKnown RBP11.43□□□□□ -0.58
CDRT1-205ENST00000475944 FOXD4L4Q8WXT5 416 aaPredicted RBP11.43□□□□□ -0.58
CDRT1-205ENST00000475944 GATA6Q92908 595 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 IMPG2Q9BZV3 1241 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 DNAI2Q9GZS0 605 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 CAPN10Q9HC96 672 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 PNPLA8Q9NP80 782 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 HMGXB4Q9UGU5 601 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 DNMT3LQ9UJW3 386 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 HCN2Q9UL51 889 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 PCDHA7Q9UN72 937 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 FRMD4BQ9Y2L6 1034 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 NEUROG3Q9Y4Z2 214 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 PCDHA5Q9Y5H7 936 aa11.43□□□□□ -0.58
CDRT1-205ENST00000475944 A0A1W2PQD8 194 aa11.42□□□□□ -0.58
CDRT1-205ENST00000475944 H0Y626 953 aa11.42□□□□□ -0.58
CDRT1-205ENST00000475944 ARHGAP33O14559 1287 aa11.42□□□□□ -0.58
CDRT1-205ENST00000475944 CYP26A1O43174 497 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms