RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 CCDC127Q96BQ5 260 aa12.2□□□□□ -0.46
EXOSC1-207ENST00000474309 SMARCD1Q96GM5 515 aa12.2□□□□□ -0.46
EXOSC1-207ENST00000474309 GABRG3Q99928 467 aa12.2□□□□□ -0.46
EXOSC1-207ENST00000474309 C7orf25Q9BPX7 421 aa12.2□□□□□ -0.46
EXOSC1-207ENST00000474309 MED10Q9BTT4 135 aa12.2□□□□□ -0.46
EXOSC1-207ENST00000474309 GTPBP2Q9BX10 602 aaKnown RBP12.2□□□□□ -0.46
EXOSC1-207ENST00000474309 KLF16Q9BXK1 252 aaPredicted RBP12.2□□□□□ -0.46
EXOSC1-207ENST00000474309 CCSER2Q9H7U1 834 aa12.2□□□□□ -0.46
EXOSC1-207ENST00000474309 ZDHHC4Q9NPG8 344 aa12.2□□□□□ -0.46
EXOSC1-207ENST00000474309 MARK1Q9P0L2 795 aa12.2□□□□□ -0.46
EXOSC1-207ENST00000474309 CALCOCO1Q9P1Z2 691 aa12.2□□□□□ -0.46
EXOSC1-207ENST00000474309 NXF1Q9UBU9 619 aaKnown RBP12.2□□□□□ -0.46
EXOSC1-207ENST00000474309 SUSD2Q9UGT4 822 aa12.2□□□□□ -0.46
EXOSC1-207ENST00000474309 KLK13Q9UKR3 277 aa12.2□□□□□ -0.46
EXOSC1-207ENST00000474309 URB1O60287 2271 aaKnown RBP12.2□□□□□ -0.46
EXOSC1-207ENST00000474309 PCDH15Q96QU1 1955 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 CACNG3O60359 315 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 PHACTR2O75167 634 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 PPP6R2O75170 966 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 GJB3O75712 270 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 CAPNS1P04632 268 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 ATP5C1P36542 298 aaKnown RBP12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 ASIC1P78348 528 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 CLDN10P78369 228 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 EHHADHQ08426 723 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 COL9A2Q14055 689 aaPredicted RBP12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 BMT2Q1RMZ1 405 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 ZNF667Q5HYK9 610 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 SYCP2LQ5T4T6 812 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 GRAMD4Q6IC98 578 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 KIAA1211LQ6NV74 962 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 RAB44Q7Z6P3 723 aaPredicted RBP12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 MIB1Q86YT6 1006 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 SLC41A1Q8IVJ1 513 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 CHCHD4Q8N4Q1 142 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 TRIML1Q8N9V2 468 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 IQUBQ8NA54 791 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 SCFD1Q8WVM8 642 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 WBP2Q969T9 261 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 GZF1Q9H116 711 aaPredicted RBP12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 CSNK1G1Q9HCP0 422 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 TLR8Q9NR97 1041 aaKnown RBP12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 GMIPQ9P107 970 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 FBXO10Q9UK96 956 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 NFE2L3Q9Y4A8 694 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 DMXL2Q8TDJ6 3036 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 ASPMQ8IZT6 3477 aa12.19□□□□□ -0.46
EXOSC1-207ENST00000474309 ANKRD11Q6UB99 2663 aaPredicted RBP12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 ATXN2Q99700 1313 aaKnown RBP12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 AKAP13Q12802 2813 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 PVALEFA0A1B0GWK0 134 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 TRIM24O15164 1050 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 TLR5O60602 858 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 NDUFS2O75306 463 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 AP1G2O75843 785 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 C4BPAP04003 597 aaKnown RBP12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 CISD3P0C7P0 127 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 GNSP15586 552 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 CYP2J2P51589 502 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 ZNF132P52740 706 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 CDH8P55286 799 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 FAM193AP78312 1265 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 RING1Q06587 406 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 GOLGA8FQ08AF8 430 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 GOLGA8DPQ0D2H9 430 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 TRIP6Q15654 476 aaKnown RBP12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 EGFLAMQ63HQ2 1017 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 KLHDC10Q6PID8 442 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 UNC13DQ70J99 1090 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 UNC93AQ86WB7 457 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 CHPFQ8IZ52 775 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 FUKQ8N0W3 1084 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 ZNF276Q8N554 614 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 DEFB119Q8N690 84 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 ZMIZ2Q8NF64 920 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 PARD3BQ8TEW8 1205 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 TMEM174Q8WUU8 243 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 INTS4Q96HW7 963 aaKnown RBP12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 SMOQ99835 787 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 BBS2Q9BXC9 721 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 ZDHHC5Q9C0B5 715 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 NACA2Q9H009 215 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 MAGEF1Q9HAY2 307 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 CYLDQ9NQC7 956 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 DNAJC17Q9NVM6 304 aaKnown RBP12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 LHX6Q9UPM6 363 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 MTMR6Q9Y217 621 aa12.18□□□□□ -0.46
EXOSC1-207ENST00000474309 PRRT4C9JH25 899 aa12.17□□□□□ -0.46
EXOSC1-207ENST00000474309 NEDD8-MDP1E9PL57 170 aa12.17□□□□□ -0.46
EXOSC1-207ENST00000474309 TAF4O00268 1085 aa12.17□□□□□ -0.46
EXOSC1-207ENST00000474309 NPC1O15118 1278 aa12.17□□□□□ -0.46
EXOSC1-207ENST00000474309 SPTLC2O15270 562 aa12.17□□□□□ -0.46
EXOSC1-207ENST00000474309 EXOC3O60645 756 aa12.17□□□□□ -0.46
EXOSC1-207ENST00000474309 RPN1P04843 607 aaKnown RBP12.17□□□□□ -0.46
EXOSC1-207ENST00000474309 P4HA1P13674 534 aa12.17□□□□□ -0.46
EXOSC1-207ENST00000474309 HOXB3P14651 431 aaPredicted RBP12.17□□□□□ -0.46
EXOSC1-207ENST00000474309 TYRP14679 529 aa12.17□□□□□ -0.46
EXOSC1-207ENST00000474309 NDUFV2P19404 249 aa12.17□□□□□ -0.46
EXOSC1-207ENST00000474309 WASP42768 502 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms