RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 WDR75Q8IWA0 830 aaKnown RBP19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 MMP19Q99542 508 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 FAM213AQ9BRX8 229 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 ZC3H12CQ9C0D7 883 aaKnown RBP19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 PI4KBQ9UBF8 816 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 APOBEC2Q9Y235 224 aaKnown RBP19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 AP4B1Q9Y6B7 739 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 LYPLA1O75608 230 aaPredicted RBP19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 SRGAP2CP0DJJ0 459 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 SRGAP2BP0DMP2 458 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 NPTX2P47972 431 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 COG7P83436 770 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 DNAJC24Q6P3W2 148 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 TMEM179Q6ZVK1 233 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 RNF168Q8IYW5 571 aaPredicted RBP19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 GPD1LQ8N335 351 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 PIWIL2Q8TC59 973 aaKnown RBP19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 MKS1Q9NXB0 559 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 ARHGEF38Q9NXL2 777 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 ZNF180Q9UJW8 692 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 RAB26Q9ULW5 256 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 DNAJC16Q9Y2G8 782 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 TCRBV5S1A1TA0A578 114 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 TMEM221A6NGB7 291 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 PPEF1O14829 653 aaPredicted RBP19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 ADCY3O60266 1144 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 UGT1A9O60656 530 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 ITGB5P18084 799 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 PPIDQ08752 370 aaKnown RBP19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 SPP2Q13103 211 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 CUL2Q13617 745 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 ABCB5Q2M3G0 1257 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 KCNT1Q5JUK3 1230 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 FAM182AQ5T1J6 154 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 BORAQ6PGQ7 559 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 BBS12Q6ZW61 710 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 FNDC8Q8TC99 324 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 UGT1A7Q9HAW7 530 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 UGT1A10Q9HAW8 530 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 UGT1A8Q9HAW9 530 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 PNPLA8Q9NP80 782 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 TMOD2Q9NZR1 351 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 PSMD13Q9UNM6 376 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 H3BSA7 217 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 ITM2AO43736 263 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 CDH2P19022 906 aaPredicted RBP19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 VARSP26640 1264 aaKnown RBP19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 HOXA10P31260 410 aaPredicted RBP19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 ABCD1P33897 745 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 QARSP47897 775 aaKnown RBP19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 TDRD10Q5VZ19 366 aaKnown RBP19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 TATDN1Q6P1N9 297 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 LRRC8BQ6P9F7 803 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 FRMD7Q6ZUT3 714 aa19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 APOBEC3GQ9HC16 384 aaKnown RBP19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 C6orf203Q9P0P8 240 aaPredicted RBP19.29■□□□□ 0.68
ECHDC1-214ENST00000474289 BIRC5O15392 142 aa19.28■□□□□ 0.68
ECHDC1-214ENST00000474289 SUPT3HO75486 399 aa19.28■□□□□ 0.68
ECHDC1-214ENST00000474289 TOM1L1O75674 476 aa19.28■□□□□ 0.68
ECHDC1-214ENST00000474289 GH2P01242 217 aa19.28■□□□□ 0.68
ECHDC1-214ENST00000474289 MTTPP55157 894 aa19.28■□□□□ 0.68
ECHDC1-214ENST00000474289 PIGHQ14442 188 aaPredicted RBP19.28■□□□□ 0.68
ECHDC1-214ENST00000474289 LPIN1Q14693 890 aa19.28■□□□□ 0.68
ECHDC1-214ENST00000474289 ZACNQ401N2 412 aa19.28■□□□□ 0.68
ECHDC1-214ENST00000474289 ARCQ7LC44 396 aa19.28■□□□□ 0.68
ECHDC1-214ENST00000474289 NDUFAF2Q8N183 169 aa19.28■□□□□ 0.68
ECHDC1-214ENST00000474289 TFB1MQ8WVM0 346 aaKnown RBP19.28■□□□□ 0.68
ECHDC1-214ENST00000474289 MXRA8Q9BRK3 442 aa19.28■□□□□ 0.68
ECHDC1-214ENST00000474289 SIKE1Q9BRV8 207 aa19.28■□□□□ 0.68
ECHDC1-214ENST00000474289 KCNH7Q9NS40 1196 aa19.28■□□□□ 0.68
ECHDC1-214ENST00000474289 TDRKHQ9Y2W6 561 aaKnown RBP19.28■□□□□ 0.68
ECHDC1-214ENST00000474289 CEPT1Q9Y6K0 416 aa19.28■□□□□ 0.68
ECHDC1-214ENST00000474289 LOC100653049A0A140TA62 436 aa19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 KRT34O76011 436 aa19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 HDAC4P56524 1084 aa19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 MTA1Q13330 715 aa19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 USP41Q3LFD5 358 aa19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 MAVSQ7Z434 540 aa19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 FRMD8P1Q9BZ68 369 aaPredicted RBP19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 EHMT1Q9H9B1 1298 aa19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 SMYD2Q9NRG4 433 aa19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 EFR3BQ9Y2G0 817 aa19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 HNRNPDLO14979 420 aaKnown RBP19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 DHX15O43143 795 aaKnown RBP19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 ZMPSTE24O75844 475 aa19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 WNT7BP56706 349 aa19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 DMP1Q13316 513 aaPredicted RBP19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 KCNJ11Q14654 390 aa19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 UGCGQ16739 394 aa19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 RSPH3Q86UC2 560 aa19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 PPP1R14CQ8TAE6 165 aa19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 CMTM5Q96DZ9 223 aa19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 STN1Q9H668 368 aaKnown RBP19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 NRDE2Q9H7Z3 1164 aa19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 AK5Q9Y6K8 562 aa19.27■□□□□ 0.68
ECHDC1-214ENST00000474289 FBXO21O94952 628 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 TNNI1P19237 187 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 IL1R2P27930 398 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 CRHR1P34998 444 aa19.26■□□□□ 0.67
ECHDC1-214ENST00000474289 STAT2P52630 851 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms