RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 PARM1Q6UWI2 310 aa20.94■□□□□ 0.94
SF1-213ENST00000472725 ZNF571Q7Z3V5 609 aaPredicted RBP20.94■□□□□ 0.94
SF1-213ENST00000472725 CPA5Q8WXQ8 436 aa20.94■□□□□ 0.94
SF1-213ENST00000472725 FGF14Q92915 247 aa20.94■□□□□ 0.94
SF1-213ENST00000472725 VCPIP1Q96JH7 1222 aa20.94■□□□□ 0.94
SF1-213ENST00000472725 PCDHB18PQ96TA0 734 aa20.94■□□□□ 0.94
SF1-213ENST00000472725 NACA2Q9H009 215 aa20.94■□□□□ 0.94
SF1-213ENST00000472725 RNF38Q9H0F5 515 aa20.94■□□□□ 0.94
SF1-213ENST00000472725 CCSER2Q9H7U1 834 aa20.94■□□□□ 0.94
SF1-213ENST00000472725 SEPT11Q9NVA2 429 aaKnown RBP20.94■□□□□ 0.94
SF1-213ENST00000472725 TMEM51Q9NW97 253 aa20.94■□□□□ 0.94
SF1-213ENST00000472725 OSER1Q9NX31 292 aa20.94■□□□□ 0.94
SF1-213ENST00000472725 IMPACTQ9P2X3 320 aa20.94■□□□□ 0.94
SF1-213ENST00000472725 DNMT3LQ9UJW3 386 aa20.94■□□□□ 0.94
SF1-213ENST00000472725 NUMBLQ9Y6R0 609 aa20.94■□□□□ 0.94
SF1-213ENST00000472725 MYO10Q9HD67 2058 aa20.93■□□□□ 0.94
SF1-213ENST00000472725 GOLGA6L3A6NEY3 463 aa20.93■□□□□ 0.94
SF1-213ENST00000472725 HSF2BPO75031 334 aa20.93■□□□□ 0.94
SF1-213ENST00000472725 ADCY5O95622 1261 aa20.93■□□□□ 0.94
SF1-213ENST00000472725 ERBB2P04626 1255 aa20.93■□□□□ 0.94
SF1-213ENST00000472725 CALB1P05937 261 aa20.93■□□□□ 0.94
SF1-213ENST00000472725 YWHAZP63104 245 aaKnown RBP20.93■□□□□ 0.94
SF1-213ENST00000472725 SLC6A3Q01959 620 aa20.93■□□□□ 0.94
SF1-213ENST00000472725 C1QBPQ07021 282 aaKnown RBP20.93■□□□□ 0.94
SF1-213ENST00000472725 TDGQ13569 410 aa20.93■□□□□ 0.94
SF1-213ENST00000472725 TANGO2Q6ICL3 276 aa20.93■□□□□ 0.94
SF1-213ENST00000472725 ACAD10Q6JQN1 1059 aa20.93■□□□□ 0.94
SF1-213ENST00000472725 SLC26A9Q7LBE3 791 aa20.93■□□□□ 0.94
SF1-213ENST00000472725 RNF135Q8IUD6 432 aa20.93■□□□□ 0.94
SF1-213ENST00000472725 MFSD6LQ8IWD5 586 aa20.93■□□□□ 0.94
SF1-213ENST00000472725 RNF139Q8WU17 664 aa20.93■□□□□ 0.94
SF1-213ENST00000472725 USP13Q92995 863 aaPredicted RBP20.93■□□□□ 0.94
SF1-213ENST00000472725 SLC22A12Q96S37 553 aa20.93■□□□□ 0.94
SF1-213ENST00000472725 CYP2S1Q96SQ9 504 aa20.93■□□□□ 0.94
SF1-213ENST00000472725 POPDC2Q9HBU9 364 aa20.93■□□□□ 0.94
SF1-213ENST00000472725 SORCS3Q9UPU3 1222 aa20.93■□□□□ 0.94
SF1-213ENST00000472725 SSU72P8A0A1W2PR75 194 aa20.92■□□□□ 0.94
SF1-213ENST00000472725 HEPACAM2A8MVW5 462 aa20.92■□□□□ 0.94
SF1-213ENST00000472725 PIK3R2O00459 728 aa20.92■□□□□ 0.94
SF1-213ENST00000472725 MBL2P11226 248 aaPredicted RBP20.92■□□□□ 0.94
SF1-213ENST00000472725 SKILP12757 684 aa20.92■□□□□ 0.94
SF1-213ENST00000472725 PSMC3P17980 439 aa20.92■□□□□ 0.94
SF1-213ENST00000472725 PGFP49763 221 aa20.92■□□□□ 0.94
SF1-213ENST00000472725 GOLGA8FQ08AF8 430 aa20.92■□□□□ 0.94
SF1-213ENST00000472725 GOLGA8DPQ0D2H9 430 aa20.92■□□□□ 0.94
SF1-213ENST00000472725 FCHO2Q0JRZ9 810 aa20.92■□□□□ 0.94
SF1-213ENST00000472725 C10orf120Q5SQS8 335 aa20.92■□□□□ 0.94
SF1-213ENST00000472725 OR6B2Q6IFH4 312 aa20.92■□□□□ 0.94
SF1-213ENST00000472725 MSANTD2Q6P1R3 559 aa20.92■□□□□ 0.94
SF1-213ENST00000472725 OLFML1Q6UWY5 402 aa20.92■□□□□ 0.94
SF1-213ENST00000472725 RSRC2Q7L4I2 434 aaKnown RBP20.92■□□□□ 0.94
SF1-213ENST00000472725 ARCQ7LC44 396 aa20.92■□□□□ 0.94
SF1-213ENST00000472725 GPIHBP1Q8IV16 184 aa20.92■□□□□ 0.94
SF1-213ENST00000472725 SLC44A3Q8N4M1 653 aa20.92■□□□□ 0.94
SF1-213ENST00000472725 SLC30A5Q8TAD4 765 aa20.92■□□□□ 0.94
SF1-213ENST00000472725 OLIG1Q8TAK6 271 aa20.92■□□□□ 0.94
SF1-213ENST00000472725 BPIFB1Q8TDL5 484 aa20.92■□□□□ 0.94
SF1-213ENST00000472725 THG1LQ9NWX6 298 aaKnown RBP20.92■□□□□ 0.94
SF1-213ENST00000472725 PRAMEF12O95522 483 aa20.91■□□□□ 0.94
SF1-213ENST00000472725 KPNA1P52294 538 aaPredicted RBP20.91■□□□□ 0.94
SF1-213ENST00000472725 ADKP55263 362 aaKnown RBP20.91■□□□□ 0.94
SF1-213ENST00000472725 COG7P83436 770 aa20.91■□□□□ 0.94
SF1-213ENST00000472725 USP4Q13107 963 aa20.91■□□□□ 0.94
SF1-213ENST00000472725 MAPK8IP2Q13387 824 aaPredicted RBP20.91■□□□□ 0.94
SF1-213ENST00000472725 WDR59Q6PJI9 974 aa20.91■□□□□ 0.94
SF1-213ENST00000472725 FAM183BPQ6ZVS7 135 aa20.91■□□□□ 0.94
SF1-213ENST00000472725 XYLT1Q86Y38 959 aa20.91■□□□□ 0.94
SF1-213ENST00000472725 UBALD2Q8IYN6 164 aa20.91■□□□□ 0.94
SF1-213ENST00000472725 CLEC4CQ8WTT0 213 aa20.91■□□□□ 0.94
SF1-213ENST00000472725 NDRG1Q92597 394 aaKnown RBP20.91■□□□□ 0.94
SF1-213ENST00000472725 FAM149B1Q96BN6 582 aa20.91■□□□□ 0.94
SF1-213ENST00000472725 C5orf42Q9H799 3197 aa20.91■□□□□ 0.94
SF1-213ENST00000472725 GRPEL1Q9HAV7 217 aa20.91■□□□□ 0.94
SF1-213ENST00000472725 RRN3Q9NYV6 651 aa20.91■□□□□ 0.94
SF1-213ENST00000472725 ADAM22Q9P0K1 906 aa20.91■□□□□ 0.94
SF1-213ENST00000472725 ARHGAP20Q9P2F6 1191 aa20.91■□□□□ 0.94
SF1-213ENST00000472725 CPQQ9Y646 472 aa20.91■□□□□ 0.94
SF1-213ENST00000472725 GOLGA6L6A8MZA4 724 aa20.9■□□□□ 0.94
SF1-213ENST00000472725 DDX3XO00571 662 aaKnown RBP eCLIP20.9■□□□□ 0.94
SF1-213ENST00000472725 CAPN9O14815 690 aa20.9■□□□□ 0.94
SF1-213ENST00000472725 RTN2O75298 545 aa20.9■□□□□ 0.94
SF1-213ENST00000472725 VIPR2P41587 438 aa20.9■□□□□ 0.94
SF1-213ENST00000472725 ZNF77Q15935 545 aa20.9■□□□□ 0.94
SF1-213ENST00000472725 ARHGAP29Q52LW3 1261 aa20.9■□□□□ 0.94
SF1-213ENST00000472725 VITQ6UXI7 678 aa20.9■□□□□ 0.94
SF1-213ENST00000472725 MON1BQ7L1V2 547 aa20.9■□□□□ 0.94
SF1-213ENST00000472725 TC2NQ8N9U0 490 aa20.9■□□□□ 0.94
SF1-213ENST00000472725 TRIM11Q96F44 468 aa20.9■□□□□ 0.94
SF1-213ENST00000472725 KXD1Q9BQD3 176 aa20.9■□□□□ 0.94
SF1-213ENST00000472725 TRMT61BQ9BVS5 477 aaKnown RBP20.9■□□□□ 0.94
SF1-213ENST00000472725 TRPV5Q9NQA5 729 aa20.9■□□□□ 0.94
SF1-213ENST00000472725 MARCH2Q9P0N8 246 aa20.9■□□□□ 0.94
SF1-213ENST00000472725 TJP2Q9UDY2 1190 aa20.9■□□□□ 0.94
SF1-213ENST00000472725 KIF26AQ9ULI4 1882 aaPredicted RBP20.9■□□□□ 0.94
SF1-213ENST00000472725 E2F8A0AVK6 867 aa20.89■□□□□ 0.93
SF1-213ENST00000472725 CHADO15335 359 aa20.89■□□□□ 0.93
SF1-213ENST00000472725 NCAM1P13591 858 aa20.89■□□□□ 0.93
SF1-213ENST00000472725 PTP4A2Q12974 167 aa20.89■□□□□ 0.93
SF1-213ENST00000472725 NNTQ13423 1086 aa20.89■□□□□ 0.93
SF1-213ENST00000472725 MMS22LQ6ZRQ5 1243 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms