RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 TMEM9BQ9NQ34 198 aa15.1■□□□□ 0.01
ABCF3-209ENST00000472608 LIMA1Q9UHB6 759 aaKnown RBP15.1■□□□□ 0.01
ABCF3-209ENST00000472608 KIAA1257Q9ULG3 409 aa15.1■□□□□ 0.01
ABCF3-209ENST00000472608 SOAT2O75908 522 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 CD58P19256 250 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 ACO1P21399 889 aaKnown RBP15.09■□□□□ 0.01
ABCF3-209ENST00000472608 PON1P27169 355 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 RAD23BP54727 409 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 CREB5Q02930 508 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 GRSF1Q12849 480 aaKnown RBP eCLIP15.09■□□□□ 0.01
ABCF3-209ENST00000472608 LRMPQ12912 555 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 IQCB1Q15051 598 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 KRT31Q15323 416 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 CCDC142Q17RM4 750 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 HSP90AA4PQ58FG1 418 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 PAQR9Q6ZVX9 377 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 GPIHBP1Q8IV16 184 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 DHX40Q8IX18 779 aaKnown RBP15.09■□□□□ 0.01
ABCF3-209ENST00000472608 FUKQ8N0W3 1084 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 AOPEPQ8N6M6 819 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 SLC4A11Q8NBS3 891 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 CYFIP2Q96F07 1278 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 TRMT2BQ96GJ1 504 aaKnown RBP15.09■□□□□ 0.01
ABCF3-209ENST00000472608 SMARCD1Q96GM5 515 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 MYRFLQ96LU7 910 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 TWNKQ96RR1 684 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 FAM83CQ9BQN1 747 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 CRACR2AQ9BSW2 395 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 HSD3B7Q9H2F3 369 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 CSNK1G1Q9HCP0 422 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 EHD2Q9NZN4 543 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 UXTQ9UBK9 157 aaPredicted RBP15.09■□□□□ 0.01
ABCF3-209ENST00000472608 APEX2Q9UBZ4 518 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 HMGXB4Q9UGU5 601 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 CNTN6Q9UQ52 1028 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 PTPRDP23468 1912 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 ASCC3Q8N3C0 2202 aaKnown RBP15.09■□□□□ 0.01
ABCF3-209ENST00000472608 CACNA1EQ15878 2313 aa15.09■□□□□ 0.01
ABCF3-209ENST00000472608 NUP210Q8TEM1 1887 aaPredicted RBP15.08■□□□□ 0.01
ABCF3-209ENST00000472608 NOL4O94818 638 aa15.08■□□□□ 0
ABCF3-209ENST00000472608 PRAMEF12O95522 483 aa15.08■□□□□ 0
ABCF3-209ENST00000472608 PAEPP09466 180 aa15.08■□□□□ 0
ABCF3-209ENST00000472608 HMGA1P17096 107 aaKnown RBP15.08■□□□□ 0
ABCF3-209ENST00000472608 SLC9A1P19634 815 aa15.08■□□□□ 0
ABCF3-209ENST00000472608 CDK11BP21127 795 aaKnown RBP15.08■□□□□ 0
ABCF3-209ENST00000472608 GRIK1P39086 918 aa15.08■□□□□ 0
ABCF3-209ENST00000472608 MFAP3P55082 362 aa15.08■□□□□ 0
ABCF3-209ENST00000472608 DDR2Q16832 855 aa15.08■□□□□ 0
ABCF3-209ENST00000472608 ARHGAP17Q68EM7 881 aa15.08■□□□□ 0
ABCF3-209ENST00000472608 SYT13Q7L8C5 426 aa15.08■□□□□ 0
ABCF3-209ENST00000472608 FAM35AQ86V20 835 aa15.08■□□□□ 0
ABCF3-209ENST00000472608 C12orf29Q8N999 325 aa15.08■□□□□ 0
ABCF3-209ENST00000472608 LPIN3Q9BQK8 851 aa15.08■□□□□ 0
ABCF3-209ENST00000472608 ZNF518BQ9C0D4 1074 aa15.08■□□□□ 0
ABCF3-209ENST00000472608 UBE2TQ9NPD8 197 aaPredicted RBP15.08■□□□□ 0
ABCF3-209ENST00000472608 ZMYM5Q9UJ78 669 aa15.08■□□□□ 0
ABCF3-209ENST00000472608 IGSF10Q6WRI0 2623 aa15.08■□□□□ 0
ABCF3-209ENST00000472608 ABCA7Q8IZY2 2146 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 BECN2A8MW95 431 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 CLDN5O00501 218 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 KHNYNO15037 678 aaKnown RBP15.07■□□□□ 0
ABCF3-209ENST00000472608 DCLK1O15075 740 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 RNF40O75150 1001 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 VDRP11473 427 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 ANXA13P27216 316 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 CDC25CP30307 473 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 COPB1P53618 953 aaKnown RBP15.07■□□□□ 0
ABCF3-209ENST00000472608 TAF12Q16514 161 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 FBXO43Q4G163 708 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 SOWAHCQ53LP3 525 aaPredicted RBP15.07■□□□□ 0
ABCF3-209ENST00000472608 GPR158Q5T848 1215 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 PMS2CLQ68D20 193 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 RRAGAQ7L523 313 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 C11orf74Q86VG3 221 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 ARHGEF19Q8IW93 802 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 SCN4BQ8IWT1 228 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 SLC2A14Q8TDB8 520 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 GIPC2Q8TF65 315 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 HEXIM2Q96MH2 286 aaKnown RBP15.07■□□□□ 0
ABCF3-209ENST00000472608 KREMEN1Q96MU8 473 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 HHIPQ96QV1 700 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 MED10Q9BTT4 135 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 TTLL2Q9BWV7 592 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 VPS16Q9H269 839 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 ATXN3LQ9H3M9 355 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 TASP1Q9H6P5 420 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 FBRSL1Q9HCM7 1045 aaKnown RBP15.07■□□□□ 0
ABCF3-209ENST00000472608 PNPLA8Q9NP80 782 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 DMAP1Q9NPF5 467 aaPredicted RBP15.07■□□□□ 0
ABCF3-209ENST00000472608 PLCB1Q9NQ66 1216 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 HPS4Q9NQG7 708 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 GKN1Q9NS71 199 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 POLR3BQ9NW08 1133 aaPredicted RBP15.07■□□□□ 0
ABCF3-209ENST00000472608 THG1LQ9NWX6 298 aaKnown RBP15.07■□□□□ 0
ABCF3-209ENST00000472608 COMMD8Q9NX08 183 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 TAB2Q9NYJ8 693 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 DAAM1Q9Y4D1 1078 aa15.07■□□□□ 0
ABCF3-209ENST00000472608 KIF26AQ9ULI4 1882 aaPredicted RBP15.07■□□□□ 0
ABCF3-209ENST00000472608 HELZ2Q9BYK8 2649 aaKnown RBP15.07■□□□□ 0
ABCF3-209ENST00000472608 ASH1LQ9NR48 2969 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms